prot_D-mesarthrocarpus_Contig100.6.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig100.6.1
Unique Nameprot_D-mesarthrocarpus_Contig100.6.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length73
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A6H5LHQ7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHQ7_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 2.110e-11
Identity = 32/69 (46.38%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    4 DRGVPGDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF 72
            D G  G L+ +  R+ GS +FT LDL S + Q+ IKE  +   A RDARGRL+E+ R G+G   +P+VF
Sbjct:  186 DSGGIGTLATMHHRIKGSNFFTLLDLPSAYHQLSIKEADRHKTAFRDARGRLYEFTRCGFGLTTIPAVF 254          
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A6H5JF70_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF70_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 1.350e-10
Identity = 30/69 (43.48%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    4 DRGVPGDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF 72
            D G  GD++ +LDR+ GSK+F++LDLA  + Q+ ++E  K   A RD  GRL E  R  +G   +P+VF
Sbjct:  155 DSGGLGDITGMLDRMKGSKFFSSLDLAQAYHQLELEETDKHKTAFRDPTGRLLESNRCAFGITTIPAVF 223          
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A6H5K948_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K948_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 1.380e-10
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
Query:    6 GVPGDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF 72
            G  G L+ + DR+  SK+FT LDL   + QIPIK   +   A RDARGRL+++ R G+G   +P+VF
Sbjct:  137 GGIGTLASMPDRVGKSKWFTLLDLPQVYHQIPIKPSDRHKTAFRDARGRLYQFNRCGFGLTTIPAVF 203          
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A6H5JAJ3_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAJ3_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 5.260e-8
Identity = 28/67 (41.79%), Postives = 42/67 (62.69%), Query Frame = 0
Query:    4 DRGVPGDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPS 70
            D G  G L+ +  R+  SK+FT LDL S + ++ I+E  +   ALRDARGR +E+ R G+G   +P+
Sbjct:  993 DSGGLGTLATMHHRIEDSKFFTLLDLPSAYHRLSIREADRHKTALRDARGRPYEFARCGFGLTNIPA 1059          
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A6H5KNQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ8_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.840e-7
Identity = 29/68 (42.65%), Postives = 40/68 (58.82%), Query Frame = 0
Query:    5 RGVPGDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF 72
            RG+ G L  +  R+  SK+FT LDL   + QI IK   +   A RDARGRL+ + R  +G   +P+VF
Sbjct:  272 RGI-GTLQTMHHRVRKSKWFTLLDLPQAYHQIAIKASDRPKTAFRDARGRLYHFNRCSFGLTTIPAVF 338          
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A7D9J1H5_PARCT (Retrovirus-related Pol poly from transposon 412, partial (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9J1H5_PARCT)

HSP 1 Score: 55.8 bits (133), Expect = 2.430e-7
Identity = 25/64 (39.06%), Postives = 39/64 (60.94%), Query Frame = 0
Query:    9 GDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF 72
            G+L  +LD LSG+ YF+ +DLA  + Q+P+ +E +   A R   G +WE+ R  YG +  P+ F
Sbjct:  388 GNLQEVLDNLSGANYFSVIDLAQGYLQVPLAKEDRPKTAFRSPTG-VWEWTRMPYGLKGSPATF 450          
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A7D9MHG4_PARCT (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9MHG4_PARCT)

HSP 1 Score: 52.8 bits (125), Expect = 3.400e-7
Identity = 24/64 (37.50%), Postives = 37/64 (57.81%), Query Frame = 0
Query:    9 GDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF 72
            G+L  +L  LSG+ YF+ +DLA  + Q+P+ +E +   A R   G  WE+ R  YG +  P+ F
Sbjct:    7 GNLQEVLHNLSGANYFSVIDLAQGYLQVPLAKEDRPKTAFRSPTG-FWEWTRMPYGLKGSPATF 69          
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A6S7ILC3_PARCT (Transposon Ty3-G Gag-Pol poly n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7ILC3_PARCT)

HSP 1 Score: 55.5 bits (132), Expect = 3.400e-7
Identity = 25/64 (39.06%), Postives = 38/64 (59.38%), Query Frame = 0
Query:    9 GDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF 72
            G+L  +LD LSG+ YF+ +DLA  + Q+P+ +E +   A R   G  WE+ R  YG +  P+ F
Sbjct:  244 GNLQEVLDNLSGANYFSVIDLAQGYLQVPLAKEDRPKTAFRSPTG-FWEWTRMPYGLKGSPATF 306          
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A7D9DU40_PARCT (Transposon Ty3-G Gag-Pol poly n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DU40_PARCT)

HSP 1 Score: 55.5 bits (132), Expect = 3.420e-7
Identity = 25/64 (39.06%), Postives = 38/64 (59.38%), Query Frame = 0
Query:    9 GDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF 72
            G+L  +LD LSG+ YF+ +DLA  + Q+P+ +E +   A R   G  WE+ R  YG +  P+ F
Sbjct:  591 GNLQEVLDNLSGANYFSVIDLAQGYLQVPLAKEDRPKTAFRSPTG-FWEWTRMPYGLKGSPATF 653          
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A7D9DJ90_PARCT (Reverse transcriptase domain-containing protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DJ90_PARCT)

HSP 1 Score: 55.1 bits (131), Expect = 4.600e-7
Identity = 25/64 (39.06%), Postives = 37/64 (57.81%), Query Frame = 0
Query:    9 GDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF 72
            G+L  +LD LSG+ YF+ +DLA  + Q+P+ +E +   A R   G  WE+ R  YG +  P  F
Sbjct:  430 GNLQEVLDNLSGANYFSVIDLAQGYLQVPLAKEDRPKTAFRSPTG-FWEWTRMPYGLKGSPETF 492          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LHQ7_9PHAE2.110e-1146.38Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JF70_9PHAE1.350e-1043.48Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K948_9PHAE1.380e-1046.27Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JAJ3_9PHAE5.260e-841.79RT_RNaseH_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KNQ8_9PHAE1.840e-742.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7D9J1H5_PARCT2.430e-739.06Retrovirus-related Pol poly from transposon 412, p... [more]
A0A7D9MHG4_PARCT3.400e-737.50Reverse transcriptase domain-containing protein (F... [more]
A0A6S7ILC3_PARCT3.400e-739.06Transposon Ty3-G Gag-Pol poly n=2 Tax=Paramuricea ... [more]
A0A7D9DU40_PARCT3.420e-739.06Transposon Ty3-G Gag-Pol poly n=3 Tax=Paramuricea ... [more]
A0A7D9DJ90_PARCT4.600e-739.06Reverse transcriptase domain-containing protein n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 11..72
e-value: 3.1E-9
score: 38.4
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 34..67
e-value: 3.1E-9
score: 38.4
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 12..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig100contigD-mesarthrocarpus_Contig100:39944..40162 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig100.6.1mRNA_D-mesarthrocarpus_Contig100.6.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig100 39737..40524 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig100.6.1 ID=prot_D-mesarthrocarpus_Contig100.6.1|Name=mRNA_D-mesarthrocarpus_Contig100.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=73bp
MGTDRGVPGDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRD
ARGRLWEYERTGYGFRILPSVF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043128Rev_trsase/Diguanyl_cyclase
IPR043502DNA/RNA_pol_sf