mRNA_D-mesarthrocarpus_Contig100.6.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A6H5LHQ7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHQ7_9PHAE) HSP 1 Score: 116 bits (291), Expect = 7.440e-26 Identity = 68/182 (37.36%), Postives = 101/182 (55.49%), Query Frame = 1 Query: 1 LDENAPPHAAKQRSSSPAEKRVVQEEVDKLYQREVIRLSHPPWVAARITVRKSGVSLRLVRDYRPLNLRMGTDRGVPGDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF*HFVSSALGATVGSY-VQFCVDEMLIHSTSFADHLKHIDEV 543 +DEN P A KQ+ +P + +V ++ D + VIR S W + V+K S R+ DYRPLN D G G L+ + R+ GS +FT LDL S + Q+ IKE + A RDARGRL+E+ R G+G +P+VF + L T V+ +D++L+HS + +H+ I+EV Sbjct: 114 IDENVTPVACKQQQYNPVQAEIVNDQADLWLETGVIRYSTSAWCSRTSIVKKKDGSNRVTIDYRPLNAVTKKDSGGIGTLATMHHRIKGSNFFTLLDLPSAYHQLSIKEADRHKTAFRDARGRLYEFTRCGFGLTTIPAVFSAHLGDTLRPTENKGGVERWLDDILLHSATLEEHMALIEEV 295
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A814X7F7_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814X7F7_9BILA) HSP 1 Score: 106 bits (264), Expect = 2.810e-22 Identity = 61/181 (33.70%), Postives = 98/181 (54.14%), Query Frame = 1 Query: 1 LDENAPPHAAKQRSSSPAEKRVVQEEVDKLYQREVIRLSHPPWVAARITVRKSGVSLRLVRDYRPLNLRMGTDRGVPGDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF*HFVSSALGATVGSYVQFCVDEMLIHSTSFADHLKHIDEV 543 L E A P AK SPA+ + ++ ++L Q+ + R S+ PW A + V+K + R DYR LN+ D ++ + D L+G+KY++ LDL S + QIPI EE K A R +RG L+E+ G + P F + + LG +D+++++S +F DH+KH+D+V Sbjct: 127 LVEGARPQQAKLHRKSPADNNTIDQQTNELLQKHIARPSNSPWAAPVVLVKKKDGTPRFCIDYRLLNMHTKKDSYPLPNIRDMFDHLNGAKYYSKLDLKSGYHQIPIAEEDKPKTAFRTSRG-LFEFNVMPQGIKNGPPTFQRIIDNTLGQLRWDCCMAYIDDIIVYSETFDDHIKHLDQV 306
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A6H5K948_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K948_9PHAE) HSP 1 Score: 100 bits (249), Expect = 2.760e-20 Identity = 63/187 (33.69%), Postives = 100/187 (53.48%), Query Frame = 1 Query: 1 LDENAPPHAAKQRSSSPAEKRVVQEEVDKLYQREVIRLSHPPWVAARITVRKSGVSLRLVRDYRPLNLRMGTDRGVPGDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF*HFVSSALGATVGSY-----VQFCVDEMLIHSTSFADHLKHIDEVL 546 +DE+ P A KQ+ +P ++ +VD+ + +I S W + + +K RL D+R LN G G L+ + DR+ SK+FT LDL + QIPIK + A RDARGRL+++ R G+G +P+VF S+ LG T+ V+ +D++LIH+ + +H + + EVL Sbjct: 63 IDEDVTPIACKQQRHNPIHADIINRQVDQWKELGIIDYSDSQWCSRIVMQQKKNGKPRLTIDHRALNELTKKSSGGIGTLASMPDRVGKSKWFTLLDLPQVYHQIPIKPSDRHKTAFRDARGRLYQFNRCGFGLTTIPAVF----SALLGDTLQPVENKGCVERWLDDILIHTETLEEHFEVLQEVL 245
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A814S0H2_ADIRI (Hypothetical protein n=3 Tax=Adineta TaxID=104781 RepID=A0A814S0H2_ADIRI) HSP 1 Score: 99.8 bits (247), Expect = 5.100e-20 Identity = 58/186 (31.18%), Postives = 99/186 (53.23%), Query Frame = 1 Query: 10 NAPPHAAKQRSSSPAEKRVVQEEVDKLYQREVIRLSHPPWVAARITVRKSGVSLRLVRDYRPLNLRMGTDRGVPGDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF*HFVSSALGATVGSYVQFCVDEMLIHSTSFADHLKHIDEVLKEDKRCQ 567 N PP + + + +++ +Q+E+DK+ + +I+ SH PW + I ++K R + DYR LN D +L RL G K+FT LDL + +FQIPI++ K A G L+++E G P F +++ +G +V +D+++I+S SF +H++H+DE+L R Q Sbjct: 307 NHPPISTRPYFKTIQQRKDIQQEIDKMLKNGIIKPSHSPWSSPVILLKKPNGEFRFIVDYRKLNAITRKDAYPQPTTEELLQRLGGHKWFTKLDLKAGYFQIPIQDCDKEKTAFCTQDG-LYQFEVLSMGLMNAPPTFQRVMNNIIGYKRWDFVLVYLDDIMIYSNSFEEHVRHLDEILATLSRHQ 491
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A6H5JF70_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF70_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 5.700e-20 Identity = 57/182 (31.32%), Postives = 100/182 (54.95%), Query Frame = 1 Query: 1 LDENAPPHAAKQRSSSPAEKRVVQEEVDKLYQREVIRLSHPPWVAARITVRKSGVSLRLVRDYRPLNLRMGTDRGVPGDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF*HFVSSALGATVGSYVQFCVDEMLIHSTSFADHLKHIDEVL 546 +DE+ P A K + SP ++ +++++ RLS W + + V KS + R+ DYR LN + D G GD++ +LDR+ GSK+F++LDLA + Q+ ++E K A RD GRL E R +G +P+VF + L +G ++ +D++ +H+ + +H +++VL Sbjct: 83 IDEDVTPIACKAQRWSPPMADILMKQLNQGLAAGTFRLSTSSWCSRIVPVPKSDGTYRICIDYRDLNKLIKKDSGGLGDITGMLDRMKGSKFFSSLDLAQAYHQLELEETDKHKTAFRDPTGRLLESNRCAFGITTIPAVFSATLGDDLRELLGKGLEKWLDDIALHTKTLEEHFVLLEKVL 264
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A4S4N4Y3_9APHY (Uncharacterized protein n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4N4Y3_9APHY) HSP 1 Score: 99.0 bits (245), Expect = 9.660e-20 Identity = 65/199 (32.66%), Postives = 109/199 (54.77%), Query Frame = 1 Query: 7 ENAPPHAAKQRSSSPAEKRVVQEEVDKLYQREVIRLSHPPWVAARITVRKSGVSLRLVRDYRPLNLRMGTDRGVPGDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF*HFVSSALGATVGSYVQFCVDEMLIHSTSFADHLKHIDEVLK--EDK-------RCQIFY 576 E P A +SSPA+++V++E+++K +++EVI S PW A + + ++G R DYR LN D + IL LSG++ ++LD S F QI + EE A R +G L+++ R +G R PS+F + S L + + +D+++++S S+ DH++H+D+VLK ED +C +FY Sbjct: 327 EGTQPIAVPMYASSPAKRQVIEEQLEKWFEQEVIEPSKSPWSAPVVIIYRNGKP-RFCVDYRKLNTMTIPDEFPIPRQNEILSALSGAQVLSSLDALSGFTQIEMAEEDIEKTAFRTHKG-LFQFRRMPFGLRNGPSIFQRTMQSILAPYLWLFCLVYIDDIVVYSKSYEDHIQHLDQVLKAVEDAGLTLSPPKCHLFY 523
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A6H5KNQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ8_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 1.820e-19 Identity = 61/167 (36.53%), Postives = 93/167 (55.69%), Query Frame = 1 Query: 64 VVQEEVDKLYQREVIRLSHPPWVAARITVRKSGVSLRLVRDYRPLN-LRMGTDRGVPGDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF*HFVSSALGATV-----GSYVQFCVDEMLIHSTSFADHLKHIDEVL 546 ++ +VDK+ ++++I S W A +K ++RL YRPLN L RG+ G L + R+ SK+FT LDL + QI IK + A RDARGRL+ + R +G +P+VF S+ LG T+ G V+ +D++LIH+ S +H K ++EVL Sbjct: 219 IINSQVDKMLEQKIIDYSDSQWCARISPQKKKDGTIRLAMGYRPLNALTKKNSRGI-GTLQTMHHRVRKSKWFTLLDLPQAYHQIAIKASDRPKTAFRDARGRLYHFNRCSFGLTTIPAVF----SALLGNTLRPVESGGCVERWLDDILIHTESLEEHFKVLEEVL 380
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A817S2V1_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817S2V1_9BILA) HSP 1 Score: 96.7 bits (239), Expect = 4.000e-19 Identity = 57/179 (31.84%), Postives = 94/179 (52.51%), Query Frame = 1 Query: 10 NAPPHAAKQRSSSPAEKRVVQEEVDKLYQREVIRLSHPPWVAARITVRKSGVSLRLVRDYRPLNLRMGTDRGVPGDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF*HFVSSALGATVGSYVQFCVDEMLIHSTSFADHLKHIDEVL 546 N PP + + + ++ Q+E+DK+ + +I S+ PW++ I ++K R + DYR LN D ++L RL G +FT LDL S +FQIPI+ K AL G L+++E G P F +++ +G +V +D+++I S SF +H+KH+DE+L Sbjct: 89 NHPPISGRSYFKTIQHRKDFQQEIDKMLKSGIIIPSNSPWLSPAILLKKPNGEFRFIVDYRKLNSITRKDSYPQPTTEKLLQRLGGHTWFTKLDLKSGYFQIPIQNREKEKTALCSQDG-LYQFEVLSMGLMNAPPTFQRVMNNIIGYNRWDFVVVYLDDIIIFSHSFDEHMKHLDEIL 266
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A815Y3B2_ADIRI (RNA-directed DNA polymerase n=3 Tax=Adineta ricciae TaxID=249248 RepID=A0A815Y3B2_ADIRI) HSP 1 Score: 96.7 bits (239), Expect = 5.980e-19 Identity = 57/167 (34.13%), Postives = 91/167 (54.49%), Query Frame = 1 Query: 46 SPAEKRVVQEEVDKLYQREVIRLSHPPWVAARITVRKSGVSLRLVRDYRPLNLRMGTDRGVPGDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF*HFVSSALGATVGSYVQFCVDEMLIHSTSFADHLKHIDEVL 546 S E ++ E+V ++ +IR S PW + + ++K S R DYR LNL D + ILD+L+GS+YFT DL + ++QIPI EE K+ A G L+E+ +G P+ F ++S LG+ +D+++++S SF HL+H+D+VL Sbjct: 607 SAKETAIINEQVTEMLDSHIIRPSTSPWSSPVVIIKKKDGSPRFCVDYRRLNLITERDVYPLPRIDDILDKLAGSRYFTTFDLKAGYWQIPIAEEDKKKTAFITTDG-LYEFNVLPFGLSNAPATFQRTINSVLGSLRWDITLVYLDDIIVYSPSFDQHLQHLDQVL 772
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Match: A0A4S4LXW4_9APHY (Uncharacterized protein (Fragment) n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4LXW4_9APHY) HSP 1 Score: 96.7 bits (239), Expect = 6.220e-19 Identity = 64/199 (32.16%), Postives = 108/199 (54.27%), Query Frame = 1 Query: 7 ENAPPHAAKQRSSSPAEKRVVQEEVDKLYQREVIRLSHPPWVAARITVRKSGVSLRLVRDYRPLNLRMGTDRGVPGDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDARGRLWEYERTGYGFRILPSVF*HFVSSALGATVGSYVQFCVDEMLIHSTSFADHLKHIDEVLK--EDK-------RCQIFY 576 E P A +SSPA+++V+++++ K +++EVI S PW A + + ++G R DYR LN + D S IL LSG++ ++LD S F QI + EE A R +G L+++ R +G R PS+F + S L + + +D+++++S S+ DH++H++ VLK ED +C +FY Sbjct: 900 EGVQPIAVPMYASSPAKRQVIEDQLQKWFEQEVIEPSKSPWSAPVVIIYRNGKP-RFCVDYRKLNAQTIPDEFPIPRQSEILSALSGAQVLSSLDALSGFTQIEMAEEDVEKTAFRTHKG-LFQFRRMPFGLRNGPSIFQRTMQSILAPYLWLFCLVYIDDIVVYSKSYEDHIQHLETVLKAVEDAGLTLSPPKCHLFY 1096 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig100.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig100.6.1 >prot_D-mesarthrocarpus_Contig100.6.1 ID=prot_D-mesarthrocarpus_Contig100.6.1|Name=mRNA_D-mesarthrocarpus_Contig100.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=73bp MGTDRGVPGDLSRILDRLSGSKYFTALDLASRFFQIPIKEERKRSIALRDback to top mRNA from alignment at D-mesarthrocarpus_Contig100:39737..40524+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig100.6.1 ID=mRNA_D-mesarthrocarpus_Contig100.6.1|Name=mRNA_D-mesarthrocarpus_Contig100.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=788bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig100:39737..40524+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig100:39737..40524+ >mRNA_D-mesarthrocarpus_Contig100.6.1 ID=mRNA_D-mesarthrocarpus_Contig100.6.1|Name=mRNA_D-mesarthrocarpus_Contig100.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=219bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig100:39737..40524+ (Discosporangium mesarthrocarpum MT17_79)back to top |