mRNA_D-mesarthrocarpus_Contig10241.5.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10241.5.1
Unique NamemRNA_D-mesarthrocarpus_Contig10241.5.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A1Z9JEE6_9PROT (ABC transmembrane type-1 domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TMED167 TaxID=1986863 RepID=A0A1Z9JEE6_9PROT)

HSP 1 Score: 324 bits (830), Expect = 1.120e-108
Identity = 164/266 (61.65%), Postives = 205/266 (77.07%), Query Frame = 1
Query:    1 MSSVSAATPGPSLWARLI-GSTLLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYRRD 795
            M++V+ A   P  W R++ G+TL  K+  G +IL +W++GV+ FA  FVA+P  VA VFPTV++D A+  A+ STL AVV GL IA++ GT++G+ MGRVK  DRML+FYVNG Y MPM+A LPL+T+WFGY ++ARLATV+FA  FS++IN  DGARSVPREYLEV  AYRA  R VWFDIT+ S+LPYLIAG RLAAGRALVGAV+AE F S+DG GMY+LANAR    NEAVVGVL L  FGL F+  MN  +R++FPWYRR+
Sbjct:    1 MNTVTVAASQPLAWKRILFGTTLRTKITTGAIILLIWQVGVQAFAPAFVAKPLNVALVFPTVLMDTAFLLASLSTLTAVVQGLIIALIAGTIVGVAMGRVKLFDRMLNFYVNGLYTMPMVALLPLITIWFGYEDDARLATVIFAGFFSIVINARDGARSVPREYLEVCKAYRAPMRYVWFDITVFSSLPYLIAGFRLAAGRALVGAVIAEFFVSLDGVGMYVLANARTFKHNEAVVGVLALVLFGLLFELTMNWTMRRFFPWYRRE 266          
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A848W379_9PROT (ABC transporter permease subunit n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W379_9PROT)

HSP 1 Score: 313 bits (801), Expect = 5.390e-104
Identity = 153/254 (60.24%), Postives = 194/254 (76.38%), Query Frame = 1
Query:   37 LWARLIGSTLLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYRRDG 798
            LW     + + IK+  G +IL +W+IGV  FAA FVA+P  +A+VFP+V+ DP +  A W+TL AV  GLA+A+V GT++G+ MGR+K  DR L+FYVNG Y MPMIA LPLLT+WFGYS +AR+AT++FAA FS++INV DGARSVP EYL+V   YRA  R VWFDITL S+LPYLIAG RLAAGRALV AV+AE F S++G GM++L+NAR    NEAVVGV+ L  FGL F+  MN + R++FPWYRR+G
Sbjct:   33 LWGTPARAKITIKVATGFLILFVWQIGVALFAANFVAKPINIAKVFPSVLADPLFQQAAWNTLAAVFQGLAVALVAGTVVGIAMGRMKVFDRALNFYVNGLYTMPMIALLPLLTIWFGYSGDARMATIIFAAFFSIVINVRDGARSVPPEYLDVCKTYRAPARFVWFDITLFSSLPYLIAGFRLAAGRALVAAVIAEFFVSLNGVGMFVLSNARSFKHNEAVVGVVALVLFGLLFELTMNWITRRYFPWYRREG 286          
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A0S8C916_9PROT (ABC transmembrane type-1 domain-containing protein n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8C916_9PROT)

HSP 1 Score: 302 bits (774), Expect = 3.450e-100
Identity = 153/252 (60.71%), Postives = 190/252 (75.40%), Query Frame = 1
Query:   37 LWARLIGSTLLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYRR 792
            LW  +  S + +KL+ G++IL  W++GV  FA  FVA+P  +A  FP VI D  +  A  STLGAV+ GL IA+V G ++G+ MGRVK  DRML+FYVNG YAMPM+A LPLL +WFGY  +ARLAT+VFAA FS+ +N  DGARSVP EYLEV  AYRA RR +WFDITL S+LPYL+AG+RLA+GRALVGAV+AE F S++G GMYILA+AR    NEAV+GVL LAAFGL  +  MN V+R++ PW RR
Sbjct:   17 LWNAIPWSDVRVKLIAGLIILVAWQVGVAAFAPRFVAKPLGIAAAFPAVITDADFLAAVVSTLGAVLKGLLIAVVGGVIVGISMGRVKFFDRMLNFYVNGLYAMPMVAVLPLLAIWFGYESDARLATIVFAAFFSIAMNARDGARSVPPEYLEVCKAYRAKRRYIWFDITLYSSLPYLVAGLRLASGRALVGAVIAEFFVSLEGVGMYILAHARSFQHNEAVIGVLALAAFGLFVEGAMNWVMRRFLPWARR 268          
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A346A004_9HYPH (ABC transporter permease n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A004_9HYPH)

HSP 1 Score: 283 bits (723), Expect = 2.460e-92
Identity = 150/272 (55.15%), Postives = 197/272 (72.43%), Query Frame = 1
Query:    1 MSSVSAATPGPSLWARL---IGSTLLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYRRDGGKG 807
            +++V+ + P P+   R        +L +LV G +IL LWE  VR +A  +VA+PS VA V P VIVDPA+  AT  TL AV  GLA+A+V GT+IGLLMGR  A +R +  YVNGFYA+PMI  LPL ++WFGYS   R+A ++FAA+FS+IINV+DGAR+VPREYLEV+ ++R++R +V F I L S++PYL+AG+RLAAGRAL+GAV+AE F S  G G YIL N+R    NEA VGVL+L AFG+GF+ L+  V R++ PWYRRD   G
Sbjct:    6 LTAVATSAPAPATAERKRSRFSDLVLPRLVVGAIILLLWEGVVRLWAPAYVAKPSTVALVIPKVIVDPAFLTATGITLSAVAQGLAVALVLGTIIGLLMGRSPALERAIRHYVNGFYAIPMIVVLPLFSLWFGYSGATRIAIIIFAAIFSIIINVADGARAVPREYLEVSRSFRSNRVNVLFGIVLPSSMPYLLAGIRLAAGRALIGAVVAEFFISAGGLGYYILYNSRTYHHNEAFVGVLLLGAFGVGFEVLVGWVTRRFLPWYRRDEKAG 277          
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A534W4V9_9DELT (ABC transporter permease n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534W4V9_9DELT)

HSP 1 Score: 272 bits (696), Expect = 3.480e-88
Identity = 148/260 (56.92%), Postives = 179/260 (68.85%), Query Frame = 1
Query:   10 VSAATPGPSLWARLIGSTLLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYR 789
            V  A+P  S+ ARL  ST L+K+  G+++LG WEI VR FA  +VARPS VA   P  +       A   TL AVV GL IA++ GTLIGL MGR++  DR+L  YVNG YAMPM+A LPLLT+WFGYS  ARLATVVFAA F + +N SDGARSVP EYLEVA A RA    VWF ITL S+LPYL+AG+RLA GRALVGAV+AE F S+DG G +IL  +R    + A V VL+LA F +G DAL+    ++   WYR
Sbjct:   16 VRDASPRRSVLARLSSSTPLVKIAGGVLVLGAWEIVVRLFAPAYVARPSSVARALPQALASAGMLRAAGVTLRAVVEGLLIAVLSGTLIGLAMGRIRVVDRLLKLYVNGLYAMPMVAILPLLTIWFGYSPAARLATVVFAAFFPIAMNASDGARSVPAEYLEVALACRARWTDVWFGITLPSSLPYLLAGLRLAIGRALVGAVVAEFFISIDGLGYFILFQSRTFHHDAAFVAVLLLAGFAVGMDALIGWFTKRHLRWYR 275          
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A1F4A3W2_9PROT (ABC transmembrane type-1 domain-containing protein n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4A3W2_9PROT)

HSP 1 Score: 255 bits (651), Expect = 1.310e-81
Identity = 133/245 (54.29%), Postives = 176/245 (71.84%), Query Frame = 1
Query:   58 STLLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYRR 792
            S L +K   GIV+  LWEI VR  A  +VARPS +A+VF +V+ D  + +   +TL AVV GLAI++V GT +GL+MGRV   +  L +YVN  +A PM+A LPL+T+WFGYS + RLA VVFA+ FS+ IN +DGARSVP E+LEVA ++RA   S  FD+ L S+LPYL+AG+RLAAGRALVGAV+AE F S+ G G YIL N+R    NEA V V++L A G+GF+A +  ++R++ PW RR
Sbjct:   19 SPLALKAGAGIVLFALWEITVRALAPEYVARPSGIAKVFFSVLTDAGFLEVAAATLRAVVQGLAISVVAGTAVGLMMGRVSVVEHGLRYYVNSLFATPMVAILPLVTLWFGYSADTRLAVVVFASFFSLAINAADGARSVPPEFLEVARSFRARPLSTIFDVLLPSSLPYLLAGLRLAAGRALVGAVVAEFFVSIPGLGYYILYNSRAFKHNEAFVAVIVLVAAGVGFEASIKWLMRRYMPWSRR 263          
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A534PK91_9DELT (ABC transporter permease n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534PK91_9DELT)

HSP 1 Score: 254 bits (649), Expect = 1.900e-81
Identity = 132/242 (54.55%), Postives = 168/242 (69.42%), Query Frame = 1
Query:   64 LLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYR 789
            +L+K+  G+ IL LWE+  R FAA +VARPS +  V P  +   A    T  TL  V  GL IA++ GT +GLLMG +K  +R+L  YVNG YAMPMIA LPLLT+WFGY+ + RLATVVFA+ F + +NV+DGARSVP EYLEVA + RA    +WF +TL S+LPYL+AGVRLA GRALVGAV+AE F SVDG G Y+L  +R    N+A V VL+L AF L  DAL+  +  ++  W+R
Sbjct:    7 VLVKIAGGLSILALWEMVARGFAAAYVARPSGILRVLPQTLGSEAVLRGTAITLWGVTQGLIIAVILGTAVGLLMGSLKLVERLLGLYVNGLYAMPMIAILPLLTIWFGYTSKTRLATVVFASFFPIAMNVADGARSVPAEYLEVARSCRARPHHLWFGVTLPSSLPYLLAGVRLAVGRALVGAVVAEFFVSVDGLGFYVLFQSRTFHHNQAFVAVLLLGAFALAIDALIAWLTGRYLRWHR 248          
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A1F4CPR2_9PROT (ABC transmembrane type-1 domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4CPR2_9PROT)

HSP 1 Score: 254 bits (648), Expect = 4.540e-81
Identity = 134/249 (53.82%), Postives = 172/249 (69.08%), Query Frame = 1
Query:   49 LIGSTLLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYRRD 795
            L+ S LL+K   GIV+LG WE  VR FA  +VA+P  +A VF  V+ D  +  A  +TL AVV GL IA+  G  +GL MGR+   +R L +YVN  +A PMIA LPL+T+WFGY+ +ARLA +VFAA FS+ +N  DGARSVP +YLEVA ++RA   S   DI L S+LPYLIAG+RLAAGRALVGAV+AE F S+ G G YIL N+R    NEA V V+ L   G+ F+A++N + R++ PW RRD
Sbjct:   22 LLASPLLLKTAAGIVLLGAWEAVVRAFAPAYVAKPIGIARVFLEVVSDGPFLAAAGATLWAVVKGLLIAITLGLAVGLAMGRLTVVERGLRYYVNSLFATPMIAILPLVTLWFGYNADARLAVIVFAAFFSIAVNTCDGARSVPLDYLEVARSFRARPLSTLLDIVLPSSLPYLIAGMRLAAGRALVGAVVAEFFISIPGLGYYILFNSRTFKHNEAFVAVIALVIVGVSFEAMLNWITRRYLPWARRD 270          
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A534YDW7_9DELT (ABC transporter permease n=3 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534YDW7_9DELT)

HSP 1 Score: 253 bits (647), Expect = 7.550e-81
Identity = 135/260 (51.92%), Postives = 173/260 (66.54%), Query Frame = 1
Query:   10 VSAATPGPSLWARLIGSTLLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYR 789
            ++A+     L  RL  S++ +KL  G  +LG WEI VR  A  +VA+PS +    P V+       A   TL AV  GL IA+V G L+GL MG ++ A+R L  YVNG YAMPM+A +PLLT+WFGY+  ARLAT++FA+ F + +NV+DGARSVP EYLEVA A RA    +WF ITL S+LPYLIAG+RLA GRALVGAV+AE   SVDG G YIL  +R    NEA+V VL+LA F +  DA ++ ++R    WYR
Sbjct:   10 LTASASSRPLGRRLAESSVALKLAGGAFVLGAWEIVVRLLAPAYVAKPSGIFAALPGVVTSAPVLGAAGITLSAVAEGLVIAVVSGVLVGLFMGSLRLAERALSLYVNGLYAMPMVAIVPLLTIWFGYTSAARLATIIFASFFPIAMNVADGARSVPAEYLEVARACRARPHQIWFGITLPSSLPYLIAGIRLAVGRALVGAVVAEFIISVDGLGFYILFQSRTFHHNEALVAVLLLAGFAVVVDAAIDWIVRSRLRWYR 269          
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Match: A0A1F4AD59_9PROT (ABC transmembrane type-1 domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F4AD59_9PROT)

HSP 1 Score: 247 bits (630), Expect = 2.480e-78
Identity = 130/245 (53.06%), Postives = 170/245 (69.39%), Query Frame = 1
Query:   64 LLIKLVFGIVILGLWEIGVRNFAAPFVARPSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVKAADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVIINVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGRALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDALMNAVLRKWFPWYRRDG 798
            L ++L  G+V+LG WEIGVR  A  +VARPSRV  VF  V+ D  +  A  +TL AV+ GL ++          MGRV A +R L +YVN  +A PM+A LPL+++WFGY  +ARLATVVFAALFSV++N  DGAR+VP +YLEVA ++RA       D+ L ++LPYL+AGVRLAAGRALV AV+AE F S+ G G YIL N+R    +EA V V++L A G+GFDAL+N + R++ PW RR G
Sbjct:   27 LALQLAAGVVLLGAWEIGVRMLAPAYVARPSRVVVVFLRVLSDAQFLAAAAATLRAVLEGLLLSXXXXXXXXXAMGRVVAVERGLRYYVNSLFATPMVAILPLMSLWFGYDGDARLATVVFAALFSVVVNTCDGARAVPNDYLEVAHSFRARGWRTLLDVVLPASLPYLLAGVRLAAGRALVAAVVAEFFVSIPGLGYYILFNSRTFKHSEAFVAVIVLVAVGVGFDALINWITRRYLPWARRGG 271          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10241.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Z9JEE6_9PROT1.120e-10861.65ABC transmembrane type-1 domain-containing protein... [more]
A0A848W379_9PROT5.390e-10460.24ABC transporter permease subunit n=1 Tax=Alphaprot... [more]
A0A0S8C916_9PROT3.450e-10060.71ABC transmembrane type-1 domain-containing protein... [more]
A0A346A004_9HYPH2.460e-9255.15ABC transporter permease n=1 Tax=Pseudolabrys taiw... [more]
A0A534W4V9_9DELT3.480e-8856.92ABC transporter permease n=1 Tax=Deltaproteobacter... [more]
A0A1F4A3W2_9PROT1.310e-8154.29ABC transmembrane type-1 domain-containing protein... [more]
A0A534PK91_9DELT1.900e-8154.55ABC transporter permease n=1 Tax=Deltaproteobacter... [more]
A0A1F4CPR2_9PROT4.540e-8153.82ABC transmembrane type-1 domain-containing protein... [more]
A0A534YDW7_9DELT7.550e-8151.92ABC transporter permease n=3 Tax=Deltaproteobacter... [more]
A0A1F4AD59_9PROT2.480e-7853.06ABC transmembrane type-1 domain-containing protein... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10241contigD-mesarthrocarpus_Contig10241:2970..3779 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog351607.Acel_0887
PFAMsBPD_transp_1
Model size810
Max annot lvl201174|Actinobacteria
KEGG koko:K02050
KEGG TC3.A.1.16,3.A.1.17
KEGG ModuleM00188
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.06e-64
EggNOG OGsCOG0600@1|root,COG0600@2|Bacteria,2GKKZ@201174|Actinobacteria,4EVVP@85013|Frankiales
Descriptionbinding-protein-dependent transport systems inner membrane component
Cds size810
COG categoryP
BRITEko00000,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789166.6581204-CDS-D-mesarthrocarpus_Contig10241:2969..37791680789166.6581204-CDS-D-mesarthrocarpus_Contig10241:2969..3779Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10241 2970..3779 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10241.5.1prot_D-mesarthrocarpus_Contig10241.5.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10241 2970..3779 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10241.5.1

>prot_D-mesarthrocarpus_Contig10241.5.1 ID=prot_D-mesarthrocarpus_Contig10241.5.1|Name=mRNA_D-mesarthrocarpus_Contig10241.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=270bp
MSSVSAATPGPSLWARLIGSTLLIKLVFGIVILGLWEIGVRNFAAPFVAR
PSRVAEVFPTVIVDPAYWDATWSTLGAVVIGLAIAMVFGTLIGLLMGRVK
AADRMLDFYVNGFYAMPMIAALPLLTVWFGYSEEARLATVVFAALFSVII
NVSDGARSVPREYLEVATAYRASRRSVWFDITLMSALPYLIAGVRLAAGR
ALVGAVLAEIFASVDGQGMYILANARGLLQNEAVVGVLMLAAFGLGFDAL
MNAVLRKWFPWYRRDGGKG*
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mRNA from alignment at D-mesarthrocarpus_Contig10241:2970..3779+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10241.5.1 ID=mRNA_D-mesarthrocarpus_Contig10241.5.1|Name=mRNA_D-mesarthrocarpus_Contig10241.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=810bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10241:2970..3779+ (Discosporangium mesarthrocarpum MT17_79)
ATGAGCAGTGTGTCAGCCGCAACGCCGGGACCGTCGCTCTGGGCGCGTCT GATCGGCTCTACGCTATTGATCAAACTGGTCTTCGGCATTGTTATTTTGG GCCTGTGGGAGATCGGCGTTCGGAACTTTGCGGCACCGTTCGTCGCCCGC CCGTCGCGCGTCGCCGAAGTTTTCCCGACCGTGATCGTCGACCCCGCCTA TTGGGATGCGACCTGGTCGACGCTCGGTGCCGTGGTGATCGGGCTCGCGA TCGCTATGGTGTTCGGGACGCTGATCGGATTGTTGATGGGGCGGGTCAAA GCCGCCGACAGGATGCTCGACTTCTACGTCAACGGCTTTTATGCGATGCC GATGATTGCGGCACTCCCACTGCTTACGGTGTGGTTTGGCTATTCCGAAG AAGCACGTCTGGCGACAGTGGTTTTTGCCGCGCTGTTCTCCGTCATTATC AACGTGTCGGACGGCGCGCGATCTGTGCCCCGGGAATATCTCGAAGTCGC GACCGCATATCGCGCCAGCCGGCGCTCGGTCTGGTTCGATATTACCCTGA TGTCGGCCCTGCCATACCTGATCGCGGGGGTCCGTCTTGCTGCCGGTCGT GCCCTTGTTGGTGCAGTGCTCGCAGAGATTTTCGCGTCGGTCGACGGGCA GGGGATGTATATCCTCGCCAATGCGCGGGGGCTTCTCCAGAATGAAGCTG TCGTCGGCGTGCTGATGCTGGCCGCCTTCGGTCTAGGCTTCGATGCCCTG ATGAACGCAGTGCTGCGCAAATGGTTCCCGTGGTACCGCCGCGACGGTGG TAAAGGTTAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10241:2970..3779+

>mRNA_D-mesarthrocarpus_Contig10241.5.1 ID=mRNA_D-mesarthrocarpus_Contig10241.5.1|Name=mRNA_D-mesarthrocarpus_Contig10241.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=810bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10241:2970..3779+ (Discosporangium mesarthrocarpum MT17_79)
ATGAGCAGTGTGTCAGCCGCAACGCCGGGACCGTCGCTCTGGGCGCGTCT
GATCGGCTCTACGCTATTGATCAAACTGGTCTTCGGCATTGTTATTTTGG
GCCTGTGGGAGATCGGCGTTCGGAACTTTGCGGCACCGTTCGTCGCCCGC
CCGTCGCGCGTCGCCGAAGTTTTCCCGACCGTGATCGTCGACCCCGCCTA
TTGGGATGCGACCTGGTCGACGCTCGGTGCCGTGGTGATCGGGCTCGCGA
TCGCTATGGTGTTCGGGACGCTGATCGGATTGTTGATGGGGCGGGTCAAA
GCCGCCGACAGGATGCTCGACTTCTACGTCAACGGCTTTTATGCGATGCC
GATGATTGCGGCACTCCCACTGCTTACGGTGTGGTTTGGCTATTCCGAAG
AAGCACGTCTGGCGACAGTGGTTTTTGCCGCGCTGTTCTCCGTCATTATC
AACGTGTCGGACGGCGCGCGATCTGTGCCCCGGGAATATCTCGAAGTCGC
GACCGCATATCGCGCCAGCCGGCGCTCGGTCTGGTTCGATATTACCCTGA
TGTCGGCCCTGCCATACCTGATCGCGGGGGTCCGTCTTGCTGCCGGTCGT
GCCCTTGTTGGTGCAGTGCTCGCAGAGATTTTCGCGTCGGTCGACGGGCA
GGGGATGTATATCCTCGCCAATGCGCGGGGGCTTCTCCAGAATGAAGCTG
TCGTCGGCGTGCTGATGCTGGCCGCCTTCGGTCTAGGCTTCGATGCCCTG
ATGAACGCAGTGCTGCGCAAATGGTTCCCGTGGTACCGCCGCGACGGTGG
TAAAGGTTAG
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