mRNA_D-mesarthrocarpus_Contig1022.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1022.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig1022.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1022.2.1 vs. uniprot
Match: D8LM75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM75_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 2.410e-23
Identity = 142/445 (31.91%), Postives = 190/445 (42.70%), Query Frame = 1
Query: 1531 RALGALCARLSRSLLGKALGTWK-HATVESRL--REALGTLQGERGAAALGAVVGR----------ALWRSQL---------RAFRQLRSVVSAGARVEQGARAVVAILSREQTRRREALLVWGLWAWRVKAAEELRAEAEQRRKGTELVLRARALVGLLLKRRRRLLEVAFEAVVAYGAWAIYH-SARNQSRLQRV-EVGSRVLERVGSRRWA---ARRGAAFVAWRSLALDRGSWAQVLQRLDRHWRRRLLSQGFQAIVARGAWGIYDSKEAEGLSYRLWAGARLVQRALSRRLAMRAVGVLAHWRHLVAEAG-IEDGGQRLLQAK-RESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMRMIGDLRLSDTCRRAGATLMARALWAGRRRALGNALRTWRTETRAAADAELQSLEMHFHVASTVLRVERRSYAARV 2778
            R L    AR++R  +  A   W+ HA    R   R  L + Q   GA  LG+VV R          ALWRS           RA   LR    +GAR   GAR +    S    RRR     W  W    KAA +   +  +R             +   L R  R +++A+      GAW  +  +AR+ + + RV E   R L   G  RW    A RG A       A +    A+ L  L +    R L++GF  I+  GAW IY SKE E  + RL  G + + RA +RR   R    L+ WRH  +E+   E+ G  LLQA+ + +                                   G R   D R+    + AG  L+   L + RRRAL  A   WR E RAAADAELQS+E HFH+A T+ RVERR+  A++
Sbjct: 1126 RGLKRTAARITRRRVAGAFARWQCHAAEAGRRSDRALLVSAQRRTGAKMLGSVVARREASARSRAWALWRSGAASAAIHDGERASADLRV---SGARHSAGARLLAT--SMGGARRRVLWKAWRTWCGEAKAAADAELQTMERHFH----------LARTLTRVERRVQLAW----VRGAWQTWRRNARSVACVPRVAERSRRALLAQGMNRWRIANAERGQAEAERERAAAEEAVRARALWGLLKRRASRQLAEGFNRILMHGAWVIYLSKEEEVRADRLSQGFQCLARACARRGERRKSAALSRWRHAASESRRYEERG--LLQARSKRAAAKTLASLVSHRERSHLARAWAIWCSGVASAAIHEGERASADRRVLGARQSAGCRLLVGVLGSARRRALAKAWSVWRKEVRAAADAELQSMEKHFHLARTLTRVERRTQLAKM 1549          
BLAST of mRNA_D-mesarthrocarpus_Contig1022.2.1 vs. uniprot
Match: A0A6H5KQH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH8_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 2.180e-21
Identity = 143/446 (32.06%), Postives = 189/446 (42.38%), Query Frame = 1
Query: 1531 RALGALCARLSRSLLGKALGTWKHATVESRLRE---ALGTLQGERGAAALGAVVGR----------ALWRSQL---------RAFRQLRSVVSAGARVEQGARAVVAILSREQTRRREALLVWGLWAWRVKAAEELRAEAEQRRKGTELVLRARALVGLLLKRRRRLLEVAFEAVVAYGAWAIYH-SARNQSRLQRV-EVGSRVLERVGSRRWA---ARRGAAFVAWRSLALDRGSWAQVLQRLDRHWRRRLLSQGFQAIVARGAWGIYDSKEAEGLSYRLWAGARLVQRALSRRLAMRAVGVLAHWRHLVAEAG--IEDGGQRLLQAK-RESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMRMIGDLRLSDTCRRAGATLMARALWAGRRRALGNALRTWRTETRAAADAELQSLEMHFHVASTVLRVERRSYAARV 2778
            R L    AR +R  +  A   W+  T E   R     L + Q   GA  LG+VV R          ALWRS           RA   LR    +GAR   GAR +   +     RRR     W  W    KAA +  AE +   +   L   AR L  ++  RR +L  V        GAW  +  +AR+ + + RV E   R L   G  RW    A RG A       A +    A+ L  L +    R L++G   I+  GAW IY SKE E  + RL  G + + RA + R   R    L+ WRH  +E+   +E G   LLQA+ + +                                   G R   D R+    + AG  L+   L + RRRAL  A   WR E RAAADAELQS+E HFH+A T+ RVERR+  A++
Sbjct:  333 RGLKRAAARTTRRRVAGAFARWQCHTAEVGRRSDRALLVSAQRRTGAKMLGSVVARREASARSRAWALWRSGAASAATHDGERASADLRV---SGARHSAGARLLATAMGG--ARRRVLWKAWRTWCGEAKAAAD--AELQTMERHFHL---ARTLTRVV--RRVQLAWVR-------GAWQAWRRNARSVACVPRVAERSRRALLAQGMNRWRIANAERGQAEAERERAAAEEAVRARALWGLLKRRASRQLAEGLNRILRHGAWVIYLSKEEEARADRLSRGFQCLARACAWRGERRKSAALSRWRHAASESRRFVERG---LLQARSKRAAAKTLASLVSHRKRSHLARAWAIWRSGVASAAIHEGERASADRRVLGARQSAGCRLLVGVLGSARRRALAKAWSVWRKEVRAAADAELQSMEKHFHLARTLTRVERRTQLAKM 756          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1022.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM75_ECTSI2.410e-2331.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQH8_9PHAE2.180e-2132.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1022contigD-mesarthrocarpus_Contig1022:7653..13264 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size3736
Hectar predicted targeting categorymitochondrion
Exons3
Cds size3732
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789165.5583456-CDS-D-mesarthrocarpus_Contig1022:7652..78761680789165.5583456-CDS-D-mesarthrocarpus_Contig1022:7652..7876Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1022 7653..7876 +
1680789165.5721776-CDS-D-mesarthrocarpus_Contig1022:9138..96371680789165.5721776-CDS-D-mesarthrocarpus_Contig1022:9138..9637Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1022 9139..9637 +
1680789165.5822613-CDS-D-mesarthrocarpus_Contig1022:10253..132621680789165.5822613-CDS-D-mesarthrocarpus_Contig1022:10253..13262Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1022 10254..13262 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1022.2.1prot_D-mesarthrocarpus_Contig1022.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1022 7653..13262 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1022.2.1

>prot_D-mesarthrocarpus_Contig1022.2.1 ID=prot_D-mesarthrocarpus_Contig1022.2.1|Name=mRNA_D-mesarthrocarpus_Contig1022.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=1244bp
VAKLVAAAGARAGRGQLLRGWGALERNRWGEQARALAAAHEAVEVERDFL
QEEVRRMQLWRGLTILAGCVGKRDRAMLARAWGEIRQEGLSRAVLTRAVA
ALLHSHRWQLRGAFHRLQLAGAEAMARRTHALTARATLGRALVARSRRKW
LAPAWRGWKALVQDQQEEEEWFERREGVRLRAAVLIARVTDGRDRLRLQR
GVAAWRLAMERARAAEVWREAEKTRREVEEWAEAAAGAGAQVALVSAQAA
HHTRQLGARLLLHWARRWRSQRLLCSLRLWRAVTEASASQERALRRCLSC
WRRRGLSQAFRGLREASMACAADRERIWRQTRAVSLGASRARRRRLRGAW
AAWIFWARERQSARGALGHGARALERILHRHKGGGALRRSFGAWVEAARA
EAEERERAKGRERRCQHLVAVVLRVGEGGRLRAKVRALGLWRLHAAAAAF
QDGSHELRASRKEAGVRQMASTAGRALQRRQARAWARLLSSGAAASAARE
QERARGKRQGRALGALCARLSRSLLGKALGTWKHATVESRLREALGTLQG
ERGAAALGAVVGRALWRSQLRAFRQLRSVVSAGARVEQGARAVVAILSRE
QTRRREALLVWGLWAWRVKAAEELRAEAEQRRKGTELVLRARALVGLLLK
RRRRLLEVAFEAVVAYGAWAIYHSARNQSRLQRVEVGSRVLERVGSRRWA
ARRGAAFVAWRSLALDRGSWAQVLQRLDRHWRRRLLSQGFQAIVARGAWG
IYDSKEAEGLSYRLWAGARLVQRALSRRLAMRAVGVLAHWRHLVAEAGIE
DGGQRLLQAKRESGARLMARALSRVATTKCSRAWACWRASAAWAAAEEGM
RMIGDLRLSDTCRRAGATLMARALWAGRRRALGNALRTWRTETRAAADAE
LQSLEMHFHVASTVLRVERRSYAARVARTWRLWAALTCEARYEDQRLAKG
GLRLTQAMTRALEGARRQTLLRAWRAWVRKVAQDGSRRLMGARFGLLASP
GRPKSKKSMSPPSSTPAPAPAPAPAPVLMGSVAGTTHTAQPPPSLGATSA
EKALQARRHSSEDKGREMGNGEEEKNKQAPTGMTKAGAGSGLRLKPVAPQ
IPVVTWNQDERDTGVAASPPGVAATAGVPGTGTGAGDWAGDWAGACLPPN
SPPPEQLLARDRLLQGTQSSLRVQQRLKGGNHGAAGSAASPSPRVIPCMQ
QSPQQGEVVESLWATESWEAGQGEGSLDLSASSEEGFRSFSVGA
back to top

mRNA from alignment at D-mesarthrocarpus_Contig1022:7653..13264+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1022.2.1 ID=mRNA_D-mesarthrocarpus_Contig1022.2.1|Name=mRNA_D-mesarthrocarpus_Contig1022.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=5612bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1022:7653..13264+ (Discosporangium mesarthrocarpum MT17_79)
GTGGCGAAGCTGGTGGCCGCTGCGGGGGCAAGGGCGGGCAGGGGCCAGCT GCTACGGGGCTGGGGGGCGTTGGAGAGGAACAGATGGGGGGAGCAGGCTC GTGCATTGGCAGCAGCCCACGAGGCAGTGGAGGTGGAGAGGGATTTCCTC CAGGAGGAGGTGAGGAGGATGCAGCTTTGGAGGGGGCTCACCATCCTGGC TGGCTGTGTTGGCAAGAGGGACAGGTGAGGGTGTTGAAGGTTTTTTTTTT TTGGGGGGGGGGATGGGAGAGGGGTGGCTGGGGAGGGGCCTGCGGGCTTA TCAAGGACCTGTTGTCAGATCAAGACCTTGCCTCTTGGGTGTGTTGTTAT ATGCGTGTATTCACTGCCCTTGTCTGTGAGTGGATTGATGATGTGCTGTG ATCAATAACATACCACAGTGGGGGGCGGCTGCTGCTGCTGCTGCTGCTGC TCTGGGCAATGCTTCTCGCTCTGGGTGACCTTGGCTTCCAGGCGAAGGGA GAGGGGGGGGGAGGAATCGCGCTGGCAGTGTCTTCTGATAGCTCTCCTGA GTTTTGGCTACTCCCTCACAACTGTCCCTACGAACAGCAGACCCTGGTGC TATGGACAAAGTCTATTGTAGAGTGTGCTGAGCGTGCGCTGCAGCCTCTT GTGTATTTTGAAAAGTCATAATGTACCTAAAGTACCTGTCCGCCCATATG TGCCCGACAACTGTTGCGCTACCTTGCGGCCACCGCCCCGACCTGTGTAT CCCTCCTGCCCCCTGCCCATGTAAGCCCCGCCCCCGCTATTGATTTACCT AATCCCCTCTCTACACCCCCTGCGTACTGACATGACTGCCGAGATCATGT CTTTGCGCCTACCACGCTGCATGCCATGCACATCCGAAGTACCCCAACCC TAACCCTTACCCTTACACTTACCCTAGCCCTTACCCTAACCCTTACCCTT ACACTTACCCTAGCCCTTAGCCTAACCCTTACCCTTACACTTACCCTAGC CCTTACCCTAACCCTTACACTTACCCTAGCCCTTAGCCTAACCCTAACCC TTACACTTACCCTAGCCCTTACCGTAACCCTTACACTTACCCTAGCCCTT ACCCTAACCCTTACACTTACCCTAGCCCTTACCCTAACCCTTACCCTTAC ACTTACCCTAGCCCTTAGCCTAACCCTTACCCTTACACTTACCCTAGCCC TTAGCCTAACCCTTACCCTTACACTTACCCTAGCCCTTACCCTAACCCTT ACCCTTACACTTACCCTAGCCCTTAGCCTAACCCTTACCCTCACCCTATA CCTGTATTACTACAACTCCTACATGCTAACCCTAACCCTAACCCTTACCC TTACCCTTACCCTTACCCTAACCCGAACCCTAACCCCCCTTCCCCTCACC CCGCCCCTGCACCTGTCCCTCGCCAATCGTTTCATCACACCCTGCCATTG TGTCACGTCCACCGGAAAAAAACAACACACACCCAGGGCAATGCTAGCCA GGGCCTGGGGAGAGATTCGGCAGGAGGGGCTCTCCCGGGCCGTCCTTACC CGTGCCGTTGCCGCCCTCCTCCACTCCCACCGGTGGCAGCTCCGGGGTGC CTTCCACCGCCTTCAACTGGCTGGGGCCGAGGCCATGGCCCGACGCACCC ATGCGTTGACCGCGCGAGCCACTCTGGGTCGTGCCCTGGTGGCTCGGAGC CGCCGGAAGTGGCTCGCGCCGGCCTGGAGGGGATGGAAGGCCCTGGTGCA AGATCAGCAGGAGGAGGAGGAGTGGTTCGAGCGCCGAGAAGGGGTCAGGC TCCGGGCGGCTGTGCTGATCGCCCGCGTGACGGATGGGCGGGACCGGCTC CGGCTCCAGAGGGGTGTGGCAGCCTGGAGGCTGGCCATGGAGAGGGCGAG GGCGGCGGAGGTCTGGCGGGAGGCAGAGAAAACCCGGCGGGAGGTGGAGG AGTGGGCGGAGGCAGCGGCGGGGGCAGGGGCACAGGTGAGTCGAAAGGAG GGATGCTTCGCGTGAGTTGACCTACAGCCTGAAGTGACTTGATTTTCCGG TCAGATCTGATACAGCCCGAATTGAAGATTTCATCGTGTCACTTCAGGTC AGGTCAAATGTGTCGGTAAAAAAAAAAAAACAACTGTAACTATTTCTTTG TGGCACGGTTAAATATTTATGCTGGCATTACCACGGTTAAAAAGAGTACA AGAAACAGGCAAAAAAGCACAAGAAACAGGCAAAAAAGAAACGAATTGGG CGAAAAGGAGCGAAAAGTCAGTCAAACAAAGGTAAAGCAAAACAACCTAC CTTAGTTTAGATGCTTCAACACCAGGAAATTCTTGGTCTGTGCATCGCTC TGGAACTCTCAATTGATTGCACTGGAGGAACGATGGGTTGATCTGTTTAG AATGTTGGCAAGGTGTCAGTCTGACCATGAACCGGTCCGACAGGTCTAAA ATGACCTGAGATCCAGGCCTTGTGACCTGGTCCAAGAAATCCAAGAAAAC CCAAGAAAATCCTCTGCTAGGACTGAGTACTGCAACCCCTGCAAGCCCTG TTAAATCACCCCCACACCCCCCCCCTTCCACCTGCCCCCTTTTTATGAAA GGTTGCCTTGGTGTCAGCCCAAGCAGCTCACCACACCCGCCAATTGGGCG CCCGCCTGCTCCTCCACTGGGCACGTCGGTGGCGCAGTCAGCGTCTGCTC TGCTCCCTGAGGCTTTGGAGAGCAGTGACAGAGGCGTCTGCCAGTCAGGA GCGTGCCCTCCGCCGCTGCCTCTCATGCTGGAGGCGGCGGGGGCTGTCCC AGGCATTCCGGGGGTTGAGGGAGGCATCCATGGCCTGTGCTGCCGATAGG GAGAGGATCTGGCGGCAGACCCGTGCTGTCAGCCTTGGGGCCTCCAGGGC ACGGCGCCGCCGCCTGAGAGGGGCGTGGGCGGCATGGATCTTTTGGGCAC GTGAGAGGCAGTCGGCAAGAGGGGCTCTGGGCCATGGAGCCCGTGCCCTG GAGCGGATCCTCCACCGACACAAGGGTGGGGGGGCACTGCGGCGATCCTT CGGAGCCTGGGTGGAGGCGGCCCGGGCAGAAGCGGAGGAGCGGGAGAGGG CCAAGGGGAGGGAGAGGCGGTGCCAGCACCTGGTGGCGGTGGTGCTCCGG GTGGGGGAGGGGGGCCGACTCCGGGCCAAGGTGCGCGCCCTGGGGCTGTG GAGGCTCCATGCGGCGGCTGCGGCCTTCCAGGATGGCAGCCATGAGCTGA GAGCCTCCCGGAAGGAGGCGGGTGTCCGTCAGATGGCCTCCACAGCCGGA CGGGCCCTCCAGCGGAGGCAGGCCAGGGCGTGGGCCCGCCTCCTCAGCAG CGGGGCTGCAGCCTCAGCGGCAAGGGAACAGGAGAGGGCCCGGGGGAAGA GGCAGGGCCGGGCGCTGGGTGCTCTGTGTGCACGGCTCTCCCGCAGCCTG CTAGGCAAGGCGTTGGGCACCTGGAAGCACGCGACTGTGGAGTCCCGCCT GCGGGAAGCCTTGGGCACACTGCAGGGGGAGCGGGGCGCTGCCGCCCTCG GAGCGGTCGTAGGTCGTGCTCTGTGGCGCTCCCAGCTCCGGGCGTTCCGA CAGCTCCGGTCCGTGGTTTCTGCGGGAGCCAGGGTTGAGCAGGGCGCCCG GGCGGTGGTTGCCATCCTGTCCAGGGAACAGACACGGCGGCGGGAGGCCC TCCTAGTCTGGGGGCTATGGGCATGGCGGGTAAAGGCGGCGGAGGAGCTC CGGGCGGAGGCCGAGCAGAGGCGGAAAGGGACGGAGTTGGTGCTGAGGGC AAGGGCGCTAGTGGGTCTGCTCCTGAAGCGGCGGCGGCGGCTGCTCGAGG TTGCATTCGAAGCCGTTGTGGCCTATGGGGCGTGGGCCATCTACCATTCC GCACGGAACCAGAGCCGGCTCCAGCGGGTGGAGGTTGGCTCCAGGGTGCT CGAAAGAGTGGGATCACGGCGGTGGGCCGCCCGGAGGGGCGCCGCCTTCG TAGCCTGGCGCAGCCTGGCACTTGACCGGGGGTCATGGGCCCAGGTGCTC CAGCGCCTTGACCGGCACTGGCGGCGCCGGCTCCTGAGCCAGGGCTTTCA GGCGATCGTCGCCCGGGGCGCCTGGGGCATCTATGACTCTAAGGAGGCAG AGGGCCTCTCTTACCGGCTCTGGGCGGGCGCACGGCTGGTCCAGAGGGCT CTTTCCCGGCGCCTCGCCATGCGGGCAGTGGGGGTCCTGGCGCACTGGCG GCATCTGGTAGCTGAGGCTGGGATTGAGGATGGGGGCCAGCGGCTGCTCC AGGCCAAGAGGGAGTCTGGGGCCCGCCTCATGGCCAGGGCGCTCTCGCGT GTGGCGACCACAAAATGTTCCAGGGCGTGGGCCTGCTGGCGTGCGTCGGC TGCCTGGGCGGCGGCGGAGGAGGGCATGCGCATGATAGGGGACCTCCGGC TCTCGGACACCTGCCGCCGGGCAGGGGCCACGCTCATGGCCAGGGCGCTC TGGGCGGGCCGGAGGCGCGCCCTGGGGAATGCCCTGAGGACATGGCGCAC AGAGACACGTGCTGCTGCGGACGCTGAGCTCCAGTCCCTGGAGATGCACT TCCATGTGGCGAGCACAGTCCTGCGGGTGGAACGGCGGAGCTATGCAGCC CGGGTGGCCCGGACATGGAGGCTCTGGGCGGCTCTGACCTGTGAGGCCAG GTATGAGGACCAGCGGTTGGCAAAGGGTGGCCTTCGCCTGACCCAGGCCA TGACAAGGGCATTGGAGGGGGCCCGGAGGCAGACACTGTTGCGGGCCTGG AGAGCCTGGGTGAGGAAGGTGGCCCAGGACGGGTCGAGGAGGCTGATGGG GGCGAGGTTTGGGCTGCTGGCCTCGCCAGGCCGCCCCAAGTCGAAGAAGT CAATGTCCCCTCCCTCCTCTACCCCTGCCCCTGCCCCTGCCCCTGCCCCT GCCCCTGTCCTAATGGGCTCTGTTGCAGGCACCACACACACAGCACAGCC ACCCCCATCCCTTGGTGCTACTTCTGCCGAGAAGGCTCTCCAGGCAAGGC GACATTCCTCTGAAGACAAGGGAAGGGAGATGGGGAACGGGGAGGAGGAG AAGAACAAGCAGGCACCGACAGGCATGACCAAGGCCGGGGCAGGGTCTGG ACTGAGGCTGAAGCCTGTAGCACCTCAGATACCTGTGGTGACCTGGAACC AGGACGAACGGGACACCGGGGTGGCAGCATCCCCCCCTGGCGTGGCGGCA ACGGCTGGGGTGCCGGGGACAGGGACAGGGGCAGGGGATTGGGCAGGGGA TTGGGCAGGGGCTTGTCTGCCCCCCAACTCTCCGCCACCAGAGCAGCTCC TCGCCCGGGACCGGTTGCTCCAGGGCACCCAGAGCAGCCTGCGGGTGCAA CAAAGGCTCAAAGGAGGCAACCACGGAGCAGCAGGCTCGGCCGCCTCCCC TTCCCCTAGGGTTATTCCTTGCATGCAGCAGTCGCCACAGCAGGGAGAGG TGGTGGAGTCCCTGTGGGCAACGGAAAGCTGGGAGGCTGGGCAGGGAGAA GGCAGCCTTGACCTAAGTGCCAGTTCCGAGGAAGGGTTTCGTAGCTTTTC TGTGGGTGCCAG
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1022:7653..13264+

>mRNA_D-mesarthrocarpus_Contig1022.2.1 ID=mRNA_D-mesarthrocarpus_Contig1022.2.1|Name=mRNA_D-mesarthrocarpus_Contig1022.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=3732bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1022:7653..13264+ (Discosporangium mesarthrocarpum MT17_79)
GTGGCGAAGCTGGTGGCCGCTGCGGGGGCAAGGGCGGGCAGGGGCCAGCT
GCTACGGGGCTGGGGGGCGTTGGAGAGGAACAGATGGGGGGAGCAGGCTC
GTGCATTGGCAGCAGCCCACGAGGCAGTGGAGGTGGAGAGGGATTTCCTC
CAGGAGGAGGTGAGGAGGATGCAGCTTTGGAGGGGGCTCACCATCCTGGC
TGGCTGTGTTGGCAAGAGGGACAGGGCAATGCTAGCCAGGGCCTGGGGAG
AGATTCGGCAGGAGGGGCTCTCCCGGGCCGTCCTTACCCGTGCCGTTGCC
GCCCTCCTCCACTCCCACCGGTGGCAGCTCCGGGGTGCCTTCCACCGCCT
TCAACTGGCTGGGGCCGAGGCCATGGCCCGACGCACCCATGCGTTGACCG
CGCGAGCCACTCTGGGTCGTGCCCTGGTGGCTCGGAGCCGCCGGAAGTGG
CTCGCGCCGGCCTGGAGGGGATGGAAGGCCCTGGTGCAAGATCAGCAGGA
GGAGGAGGAGTGGTTCGAGCGCCGAGAAGGGGTCAGGCTCCGGGCGGCTG
TGCTGATCGCCCGCGTGACGGATGGGCGGGACCGGCTCCGGCTCCAGAGG
GGTGTGGCAGCCTGGAGGCTGGCCATGGAGAGGGCGAGGGCGGCGGAGGT
CTGGCGGGAGGCAGAGAAAACCCGGCGGGAGGTGGAGGAGTGGGCGGAGG
CAGCGGCGGGGGCAGGGGCACAGGTTGCCTTGGTGTCAGCCCAAGCAGCT
CACCACACCCGCCAATTGGGCGCCCGCCTGCTCCTCCACTGGGCACGTCG
GTGGCGCAGTCAGCGTCTGCTCTGCTCCCTGAGGCTTTGGAGAGCAGTGA
CAGAGGCGTCTGCCAGTCAGGAGCGTGCCCTCCGCCGCTGCCTCTCATGC
TGGAGGCGGCGGGGGCTGTCCCAGGCATTCCGGGGGTTGAGGGAGGCATC
CATGGCCTGTGCTGCCGATAGGGAGAGGATCTGGCGGCAGACCCGTGCTG
TCAGCCTTGGGGCCTCCAGGGCACGGCGCCGCCGCCTGAGAGGGGCGTGG
GCGGCATGGATCTTTTGGGCACGTGAGAGGCAGTCGGCAAGAGGGGCTCT
GGGCCATGGAGCCCGTGCCCTGGAGCGGATCCTCCACCGACACAAGGGTG
GGGGGGCACTGCGGCGATCCTTCGGAGCCTGGGTGGAGGCGGCCCGGGCA
GAAGCGGAGGAGCGGGAGAGGGCCAAGGGGAGGGAGAGGCGGTGCCAGCA
CCTGGTGGCGGTGGTGCTCCGGGTGGGGGAGGGGGGCCGACTCCGGGCCA
AGGTGCGCGCCCTGGGGCTGTGGAGGCTCCATGCGGCGGCTGCGGCCTTC
CAGGATGGCAGCCATGAGCTGAGAGCCTCCCGGAAGGAGGCGGGTGTCCG
TCAGATGGCCTCCACAGCCGGACGGGCCCTCCAGCGGAGGCAGGCCAGGG
CGTGGGCCCGCCTCCTCAGCAGCGGGGCTGCAGCCTCAGCGGCAAGGGAA
CAGGAGAGGGCCCGGGGGAAGAGGCAGGGCCGGGCGCTGGGTGCTCTGTG
TGCACGGCTCTCCCGCAGCCTGCTAGGCAAGGCGTTGGGCACCTGGAAGC
ACGCGACTGTGGAGTCCCGCCTGCGGGAAGCCTTGGGCACACTGCAGGGG
GAGCGGGGCGCTGCCGCCCTCGGAGCGGTCGTAGGTCGTGCTCTGTGGCG
CTCCCAGCTCCGGGCGTTCCGACAGCTCCGGTCCGTGGTTTCTGCGGGAG
CCAGGGTTGAGCAGGGCGCCCGGGCGGTGGTTGCCATCCTGTCCAGGGAA
CAGACACGGCGGCGGGAGGCCCTCCTAGTCTGGGGGCTATGGGCATGGCG
GGTAAAGGCGGCGGAGGAGCTCCGGGCGGAGGCCGAGCAGAGGCGGAAAG
GGACGGAGTTGGTGCTGAGGGCAAGGGCGCTAGTGGGTCTGCTCCTGAAG
CGGCGGCGGCGGCTGCTCGAGGTTGCATTCGAAGCCGTTGTGGCCTATGG
GGCGTGGGCCATCTACCATTCCGCACGGAACCAGAGCCGGCTCCAGCGGG
TGGAGGTTGGCTCCAGGGTGCTCGAAAGAGTGGGATCACGGCGGTGGGCC
GCCCGGAGGGGCGCCGCCTTCGTAGCCTGGCGCAGCCTGGCACTTGACCG
GGGGTCATGGGCCCAGGTGCTCCAGCGCCTTGACCGGCACTGGCGGCGCC
GGCTCCTGAGCCAGGGCTTTCAGGCGATCGTCGCCCGGGGCGCCTGGGGC
ATCTATGACTCTAAGGAGGCAGAGGGCCTCTCTTACCGGCTCTGGGCGGG
CGCACGGCTGGTCCAGAGGGCTCTTTCCCGGCGCCTCGCCATGCGGGCAG
TGGGGGTCCTGGCGCACTGGCGGCATCTGGTAGCTGAGGCTGGGATTGAG
GATGGGGGCCAGCGGCTGCTCCAGGCCAAGAGGGAGTCTGGGGCCCGCCT
CATGGCCAGGGCGCTCTCGCGTGTGGCGACCACAAAATGTTCCAGGGCGT
GGGCCTGCTGGCGTGCGTCGGCTGCCTGGGCGGCGGCGGAGGAGGGCATG
CGCATGATAGGGGACCTCCGGCTCTCGGACACCTGCCGCCGGGCAGGGGC
CACGCTCATGGCCAGGGCGCTCTGGGCGGGCCGGAGGCGCGCCCTGGGGA
ATGCCCTGAGGACATGGCGCACAGAGACACGTGCTGCTGCGGACGCTGAG
CTCCAGTCCCTGGAGATGCACTTCCATGTGGCGAGCACAGTCCTGCGGGT
GGAACGGCGGAGCTATGCAGCCCGGGTGGCCCGGACATGGAGGCTCTGGG
CGGCTCTGACCTGTGAGGCCAGGTATGAGGACCAGCGGTTGGCAAAGGGT
GGCCTTCGCCTGACCCAGGCCATGACAAGGGCATTGGAGGGGGCCCGGAG
GCAGACACTGTTGCGGGCCTGGAGAGCCTGGGTGAGGAAGGTGGCCCAGG
ACGGGTCGAGGAGGCTGATGGGGGCGAGGTTTGGGCTGCTGGCCTCGCCA
GGCCGCCCCAAGTCGAAGAAGTCAATGTCCCCTCCCTCCTCTACCCCTGC
CCCTGCCCCTGCCCCTGCCCCTGCCCCTGTCCTAATGGGCTCTGTTGCAG
GCACCACACACACAGCACAGCCACCCCCATCCCTTGGTGCTACTTCTGCC
GAGAAGGCTCTCCAGGCAAGGCGACATTCCTCTGAAGACAAGGGAAGGGA
GATGGGGAACGGGGAGGAGGAGAAGAACAAGCAGGCACCGACAGGCATGA
CCAAGGCCGGGGCAGGGTCTGGACTGAGGCTGAAGCCTGTAGCACCTCAG
ATACCTGTGGTGACCTGGAACCAGGACGAACGGGACACCGGGGTGGCAGC
ATCCCCCCCTGGCGTGGCGGCAACGGCTGGGGTGCCGGGGACAGGGACAG
GGGCAGGGGATTGGGCAGGGGATTGGGCAGGGGCTTGTCTGCCCCCCAAC
TCTCCGCCACCAGAGCAGCTCCTCGCCCGGGACCGGTTGCTCCAGGGCAC
CCAGAGCAGCCTGCGGGTGCAACAAAGGCTCAAAGGAGGCAACCACGGAG
CAGCAGGCTCGGCCGCCTCCCCTTCCCCTAGGGTTATTCCTTGCATGCAG
CAGTCGCCACAGCAGGGAGAGGTGGTGGAGTCCCTGTGGGCAACGGAAAG
CTGGGAGGCTGGGCAGGGAGAAGGCAGCCTTGACCTAAGTGCCAGTTCCG
AGGAAGGGTTTCGTAGCTTTTCTGTGGGTGCC
back to top