mRNA_D-mesarthrocarpus_Contig10211.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10211.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig10211.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10211.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10211contigD-mesarthrocarpus_Contig10211:2242..3089 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size849
Hectar predicted targeting categoryother localisation
Exons1
Cds size825
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789164.7298481-UTR-D-mesarthrocarpus_Contig10211:2241..22641680789164.7298481-UTR-D-mesarthrocarpus_Contig10211:2241..2264Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10211 2242..2264 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789164.7395911-CDS-D-mesarthrocarpus_Contig10211:2264..30891680789164.7395911-CDS-D-mesarthrocarpus_Contig10211:2264..3089Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10211 2265..3089 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10211.2.1prot_D-mesarthrocarpus_Contig10211.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10211 2265..3089 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10211.2.1

>prot_D-mesarthrocarpus_Contig10211.2.1 ID=prot_D-mesarthrocarpus_Contig10211.2.1|Name=mRNA_D-mesarthrocarpus_Contig10211.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=275bp
MKTKAGATAYPFLWLKAEAGKQGPEVGLSVDMAKAEDEEDYLLMRERRLH
TWGGQASEDLAPRASSASPTSHHHRHRLEEEHHHRYHLHYRHHRGLHPSR
LNEQQQQQQQERAKAGTSEGGEREAQEAGRRIISPAVGCTAAAEMAPREG
GEGQGLRWGPKQRIATVEPISSPGIEDGGNSSTEVNADPEGSLHPILEGV
INLGRELGHGLGIGLGVGLGILGLGHGSELEPGPESEANEGSEGRDRSPE
PMTMSPVVAPEHTSVQHSLDGEGVG
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mRNA from alignment at D-mesarthrocarpus_Contig10211:2242..3089+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10211.2.1 ID=mRNA_D-mesarthrocarpus_Contig10211.2.1|Name=mRNA_D-mesarthrocarpus_Contig10211.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=848bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10211:2242..3089+ (Discosporangium mesarthrocarpum MT17_79)
TGGACGCAAGACTGAACAGGGCAATGAAGACCAAGGCTGGGGCCACGGCA
TACCCTTTTCTGTGGCTCAAGGCAGAGGCAGGGAAGCAAGGGCCGGAGGT
GGGGCTGAGTGTGGACATGGCCAAGGCGGAGGACGAGGAGGACTACTTGC
TCATGAGGGAGCGGCGGCTGCACACTTGGGGTGGCCAGGCGTCAGAGGAT
CTTGCACCCAGGGCATCATCAGCCTCCCCTACCTCCCACCACCACCGCCA
CAGGCTGGAGGAGGAGCACCACCACCGCTACCACCTTCACTACCGCCACC
ACCGTGGCCTTCATCCTTCTCGGCTCAATGAGCAGCAGCAGCAGCAGCAG
CAAGAAAGGGCAAAGGCAGGGACATCTGAGGGAGGGGAGCGGGAAGCACA
AGAGGCAGGGAGGAGGATAATCTCTCCTGCTGTGGGGTGTACTGCCGCCG
CAGAGATGGCCCCTCGGGAGGGGGGGGAAGGGCAGGGTCTCAGGTGGGGG
CCAAAGCAAAGAATAGCCACCGTTGAGCCAATCAGTTCGCCCGGGATCGA
AGATGGGGGCAACAGTTCCACCGAGGTCAACGCCGACCCTGAGGGCTCAC
TACACCCGATTTTGGAGGGGGTCATTAACCTGGGGCGTGAGCTGGGGCAT
GGGCTGGGGATAGGGCTAGGAGTTGGGCTGGGTATCCTGGGTCTGGGGCA
TGGGTCAGAGCTGGAGCCAGGGCCAGAGTCCGAGGCAAATGAGGGAAGTG
AAGGGAGAGACAGGAGCCCAGAGCCAATGACTATGTCCCCAGTTGTGGCT
CCAGAGCACACCAGTGTGCAGCACTCTTTGGACGGGGAGGGAGTGGGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10211:2242..3089+

>mRNA_D-mesarthrocarpus_Contig10211.2.1 ID=mRNA_D-mesarthrocarpus_Contig10211.2.1|Name=mRNA_D-mesarthrocarpus_Contig10211.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=825bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10211:2242..3089+ (Discosporangium mesarthrocarpum MT17_79)
ATGAAGACCAAGGCTGGGGCCACGGCATACCCTTTTCTGTGGCTCAAGGC
AGAGGCAGGGAAGCAAGGGCCGGAGGTGGGGCTGAGTGTGGACATGGCCA
AGGCGGAGGACGAGGAGGACTACTTGCTCATGAGGGAGCGGCGGCTGCAC
ACTTGGGGTGGCCAGGCGTCAGAGGATCTTGCACCCAGGGCATCATCAGC
CTCCCCTACCTCCCACCACCACCGCCACAGGCTGGAGGAGGAGCACCACC
ACCGCTACCACCTTCACTACCGCCACCACCGTGGCCTTCATCCTTCTCGG
CTCAATGAGCAGCAGCAGCAGCAGCAGCAAGAAAGGGCAAAGGCAGGGAC
ATCTGAGGGAGGGGAGCGGGAAGCACAAGAGGCAGGGAGGAGGATAATCT
CTCCTGCTGTGGGGTGTACTGCCGCCGCAGAGATGGCCCCTCGGGAGGGG
GGGGAAGGGCAGGGTCTCAGGTGGGGGCCAAAGCAAAGAATAGCCACCGT
TGAGCCAATCAGTTCGCCCGGGATCGAAGATGGGGGCAACAGTTCCACCG
AGGTCAACGCCGACCCTGAGGGCTCACTACACCCGATTTTGGAGGGGGTC
ATTAACCTGGGGCGTGAGCTGGGGCATGGGCTGGGGATAGGGCTAGGAGT
TGGGCTGGGTATCCTGGGTCTGGGGCATGGGTCAGAGCTGGAGCCAGGGC
CAGAGTCCGAGGCAAATGAGGGAAGTGAAGGGAGAGACAGGAGCCCAGAG
CCAATGACTATGTCCCCAGTTGTGGCTCCAGAGCACACCAGTGTGCAGCA
CTCTTTGGACGGGGAGGGAGTGGGG
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