prot_D-mesarthrocarpus_Contig10198.3.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10198.3.1
Unique Nameprot_D-mesarthrocarpus_Contig10198.3.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length451
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10198.3.1 vs. uniprot
Match: A0A6H5KKG1_9PHAE (VPS13_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKG1_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 2.040e-60
Identity = 167/425 (39.29%), Postives = 217/425 (51.06%), Query Frame = 0
Query:   26 PRHRQGKHYLVVNRTDRPVWYGQALTTETLLLGPCEETPYSWRNVP--VPGMARMTKELVPSRLCLCLRFSLHHDPQQLPGIGGG---ADEDCEGRMGAWTEPVAVDEPGTCKRLLWMAGAMGRDEGLGSQQASQMGTGVVLPLWVVVVKEGLQSRIELYGEWSFTNHLPRRVQVTWSVAISPSDSLRRQSDPLGTRGTLKLGPSGKNQADDQRGGGRLASRFDQRSRASETSALSACLGPGNAASGEGWTSELMLEFRVRALNNRSVAVGSIGPPPVATQGFNDEGIGHGARGGRGGAGRRGATTGTGVRTEQVPGLGEAHVLGERT-WSMTRQSEWVEASPGAYISLIACASADPGVTSLWFWCVAEREWVLLADCEACRSGVGGHQRHPGRMSIKLHPLALVTNRCTQSLTAWLGVDGGAGG 444
            PR R  K Y++ N TDR +W+GQ  TTETL L   EET Y WR +P  +   A   K    SRL L LR +LH    ++ G GGG   A  +  G  GAWTEP  VD  GT K                  + S +   V LPLWV V K GL++RI  +GEW FTNHLP+ +QV W  +    ++ R   +P GTRG L L     +        GR        S  S  +A S+ LG G A  G    SELMLEFR+ +  + +  VGS+GPPPVAT+   D G    A     G G  G+    G+  E + G  E  V    + W +TRQSEWV+A P  +++LI+CAS DPG++   FWCVA R+    A+         GH+ + G+M I LHP+ALV N  +  + A L    G GG
Sbjct: 2793 PRQR-SKRYIITNHTDRNLWFGQVSTTETLFLRAGEETLYRWRTIPRTLAAGAAGRKGDDASRLVLMLRLALH----RVSGSGGGYAGAGSERGGWYGAWTEPFPVDHVGTFK------------------EESDL---VTLPLWVEVDKNGLETRIAFHGEWVFTNHLPQEIQVAWVTSAGVGNAGRCLVEPTGTRGGLSLEACSTS--------GRADGSLHPVS-CSALTASSSSLGTGQAQGGR--LSELMLEFRL-STPDAAAFVGSVGPPPVATE---DLGGHPAAARDADGLGDGGSYDRRGLDDELLQGREEIEVDSSGSPWEVTRQSEWVQARPFVFLALISCASTDPGISGFAFWCVASRQASRAAN---------GHRGNLGQMRIDLHPMALVWNGSSIPMRAVLKHRSGGGG 3167          
BLAST of mRNA_D-mesarthrocarpus_Contig10198.3.1 vs. uniprot
Match: D8LCN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN3_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 1.380e-40
Identity = 127/338 (37.57%), Postives = 166/338 (49.11%), Query Frame = 0
Query:  115 GRMGAWTEPVAVDEPGTCKRLLWMAGAMGRDEGLGSQQASQMGTG------VVLPLWVVVVKEGLQSRIELYGEWSFTNHLPRRVQVTWSVAISPSDSLRRQSDPLGTRGTLKLGPSGKNQADDQRGGGRLASRFDQRSRASETSALSACLGPGNAASGEGWTSELMLEFRVRALNNRSVAVGSIGPPPVATQGFNDEGIGHGARG-GRGGAGRRGATTGTGVRTEQVPGLGEAHVLGERT-WSMTRQSEWVEASPGAYISLIACASADPGVTSLWFWCVAEREWVLLADCEACRSGVGGHQRHPGRMSIKLHPLALVTNRCTQSLTAWLGVDGGAGG 444
            GR   W  P    E     RLL  A A    EG     AS  G G      V LPLWV VVK GL++RI  +GEW F N+LP+ +QV W  +    ++ R   +P GTR  L L       A   R GG L         AS +S       PG   +     SELMLEFR+ +  + +  VGS+GPPPVAT+    +  GH A     GG    G+    G+  E + G  E  V    + W +TRQSEWV+A P  +++LI+CAS DPG++   FWCVA R+    A+         GH+ + G+M I LHP+ALV N  +  + A L    G GG
Sbjct:    5 GRWKQWARPSEEAELAAA-RLLRGAEA----EGQVGADASARGAGHQESDFVTLPLWVEVVKNGLETRIAFHGEWVFANYLPQEIQVAWVTSAGVGNAGRCLVEPTGTREGLSLEAC----ATSGRAGGSLHPLSCSALTASSSS-------PGAGQAHGERLSELMLEFRL-STPDAAACVGSVGPPPVATE----DSAGHPAAARDAGGFADGGSFDSRGLDDELLQGREEIEVDSSGSPWEVTRQSEWVQARPFVFLALISCASTDPGISGFAFWCVASRQASRAAN---------GHRGNLGQMRIDLHPMALVWNGSSIPMRAVLKHRSGGGG 312          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10198.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKG1_9PHAE2.040e-6039.29VPS13_C domain-containing protein n=2 Tax=Ectocarp... [more]
D8LCN3_ECTSI1.380e-4037.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10198contigD-mesarthrocarpus_Contig10198:1981..4265 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10198.3.1mRNA_D-mesarthrocarpus_Contig10198.3.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10198 1981..4265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10198.3.1 ID=prot_D-mesarthrocarpus_Contig10198.3.1|Name=mRNA_D-mesarthrocarpus_Contig10198.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=451bp
LSPGGSLYQPHPLQSCSRRERVKEQPRHRQGKHYLVVNRTDRPVWYGQAL
TTETLLLGPCEETPYSWRNVPVPGMARMTKELVPSRLCLCLRFSLHHDPQ
QLPGIGGGADEDCEGRMGAWTEPVAVDEPGTCKRLLWMAGAMGRDEGLGS
QQASQMGTGVVLPLWVVVVKEGLQSRIELYGEWSFTNHLPRRVQVTWSVA
ISPSDSLRRQSDPLGTRGTLKLGPSGKNQADDQRGGGRLASRFDQRSRAS
ETSALSACLGPGNAASGEGWTSELMLEFRVRALNNRSVAVGSIGPPPVAT
QGFNDEGIGHGARGGRGGAGRRGATTGTGVRTEQVPGLGEAHVLGERTWS
MTRQSEWVEASPGAYISLIACASADPGVTSLWFWCVAEREWVLLADCEAC
RSGVGGHQRHPGRMSIKLHPLALVTNRCTQSLTAWLGVDGGAGGSAGGGG
*
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