prot_D-mesarthrocarpus_Contig10198.2.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10198.2.1
Unique Nameprot_D-mesarthrocarpus_Contig10198.2.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length174
Homology
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig10198.2.1 vs. uniprot
Match: A0A6H5KKG1_9PHAE (VPS13_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKG1_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.350e-13
Identity = 46/103 (44.66%), Postives = 64/103 (62.14%), Query Frame = 0 
Query:    2 VVACEVQDFSNFLRVPMVSNALLKWDATTSYPPHLSPSQEGKAADKTGGGAGSVGPDSSAMEETLLSPHRPALSVEVEVHDAVLSISATAIQCLDQCIGEMKK 104
            VVA +VQDFSNFLR+P++S+A +K D +TS                  GG G +    +A  E+LLSP RP  S  V+V+ AV+S+S TA+QC+DQCI E+ +
Sbjct: 2676 VVAADVQDFSNFLRLPLLSHAAVKLDVSTS---------------SVRGGTGRM----AAEGESLLSPFRPIASGAVDVNGAVVSMSVTAMQCIDQCIAELTR 2759
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10198.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKG1_9PHAE1.350e-1344.66VPS13_C domain-containing protein n=2 Tax=Ectocarp... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 167..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10198contigD-mesarthrocarpus_Contig10198:1226..1947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10198.2.1mRNA_D-mesarthrocarpus_Contig10198.2.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10198 1218..1947 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10198.2.1 ID=prot_D-mesarthrocarpus_Contig10198.2.1|Name=mRNA_D-mesarthrocarpus_Contig10198.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=174bp
MVVACEVQDFSNFLRVPMVSNALLKWDATTSYPPHLSPSQEGKAADKTGG
GAGSVGPDSSAMEETLLSPHRPALSVEVEVHDAVLSISATAIQCLDQCIG
EMKKGSPSSLLAAALRPATQGGMPLPAPAATSAALASTSLARAPDDRAAD
LDVAVTPPHETPPHASVSQAEGKV
back to top