mRNA_D-mesarthrocarpus_Contig10198.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10198.2.1 vs. uniprot
Match: A0A6H5KKG1_9PHAE (VPS13_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKG1_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 6.600e-15 Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 3 Query: 3 GSMVVACEVQDFSNFLRVPMVSNALLKWDATTSYPPHLSPSQEGKAADKTGGGAGSVGPDSSAMEETLLSPHRPALSVEVEVHDAVLSISATAIQCLDQCIGEMKK 320 GS VVA +VQDFSNFLR+P++S+A +K D +TS GG G + +A E+LLSP RP S V+V+ AV+S+S TA+QC+DQCI E+ + Sbjct: 2673 GSAVVAADVQDFSNFLRLPLLSHAAVKLDVSTS---------------SVRGGTGRM----AAEGESLLSPFRPIASGAVDVNGAVVSMSVTAMQCIDQCIAELTR 2759 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10198.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10198.2.1 >prot_D-mesarthrocarpus_Contig10198.2.1 ID=prot_D-mesarthrocarpus_Contig10198.2.1|Name=mRNA_D-mesarthrocarpus_Contig10198.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=174bp MVVACEVQDFSNFLRVPMVSNALLKWDATTSYPPHLSPSQEGKAADKTGGback to top mRNA from alignment at D-mesarthrocarpus_Contig10198:1218..1947+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10198.2.1 ID=mRNA_D-mesarthrocarpus_Contig10198.2.1|Name=mRNA_D-mesarthrocarpus_Contig10198.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=730bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10198:1218..1947+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10198:1218..1947+ >mRNA_D-mesarthrocarpus_Contig10198.2.1 ID=mRNA_D-mesarthrocarpus_Contig10198.2.1|Name=mRNA_D-mesarthrocarpus_Contig10198.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=522bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10198:1218..1947+ (Discosporangium mesarthrocarpum MT17_79)back to top |