prot_D-mesarthrocarpus_Contig10198.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10198.1.1
Unique Nameprot_D-mesarthrocarpus_Contig10198.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length190
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10198.1.1 vs. uniprot
Match: A0A6H5KKG1_9PHAE (VPS13_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKG1_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 9.080e-7
Identity = 45/123 (36.59%), Postives = 58/123 (47.15%), Query Frame = 0 
Query:   93 EPSHPTLARVWRIRWRVPVWVQ-GPGGAGVKLSAADTHLVSSVLMAQLMVCSTPR---TATGRLSVTLGAQRVRVGLLTD-------------QAPSSSH---------LQPEEILRVVLTDV 189
            EPS P LAR WR+ WRVP W++    GAG           SS L+  L + S+P         +S TL AQR+ + LLT+              AP S           +QPEEI+RVV+ DV
Sbjct: 2532 EPSQPILARTWRLSWRVPSWLRFKAAGAGGAPKPPAISAWSSALLRTLSIRSSPSGPVVGPSYVSATLVAQRLTLALLTEGGAISRSSSXXXXXAPVSPSRRREGLGVFVQPEEIVRVVIADV 2654
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10198.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKG1_9PHAE9.080e-736.59VPS13_C domain-containing protein n=2 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10198contigD-mesarthrocarpus_Contig10198:93..1171 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10198.1.1mRNA_D-mesarthrocarpus_Contig10198.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10198 93..1171 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10198.1.1 ID=prot_D-mesarthrocarpus_Contig10198.1.1|Name=mRNA_D-mesarthrocarpus_Contig10198.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=190bp
RGAEEGVWLLVGEAGARIPLETVEVELSCLDPVTKRFELATRFTVHCDSI
WQPVTRFPCPKPESPSTAASAVASPPPLTTPTLGTSNTPSMCEPSHPTLA
RVWRIRWRVPVWVQGPGGAGVKLSAADTHLVSSVLMAQLMVCSTPRTATG
RLSVTLGAQRVRVGLLTDQAPSSSHLQPEEILRVVLTDVE
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