mRNA_D-mesarthrocarpus_Contig10198.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10198.1.1 vs. uniprot
Match: A0A6H5KKG1_9PHAE (VPS13_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKG1_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 9.080e-7 Identity = 45/123 (36.59%), Postives = 58/123 (47.15%), Query Frame = 1 Query: 277 EPSHPTLARVWRIRWRVPVWVQ-GPGGAGVKLSAADTHLVSSVLMAQLMVCSTPR---TATGRLSVTLGAQRVRVGLLTD-------------QAPSSSH---------LQPEEILRVVLTDV 567
EPS P LAR WR+ WRVP W++ GAG SS L+ L + S+P +S TL AQR+ + LLT+ AP S +QPEEI+RVV+ DV
Sbjct: 2532 EPSQPILARTWRLSWRVPSWLRFKAAGAGGAPKPPAISAWSSALLRTLSIRSSPSGPVVGPSYVSATLVAQRLTLALLTEGGAISRSSSXXXXXAPVSPSRRREGLGVFVQPEEIVRVVIADV 2654 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10198.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10198.1.1 >prot_D-mesarthrocarpus_Contig10198.1.1 ID=prot_D-mesarthrocarpus_Contig10198.1.1|Name=mRNA_D-mesarthrocarpus_Contig10198.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=190bp RGAEEGVWLLVGEAGARIPLETVEVELSCLDPVTKRFELATRFTVHCDSIback to top mRNA from alignment at D-mesarthrocarpus_Contig10198:93..1171+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10198.1.1 ID=mRNA_D-mesarthrocarpus_Contig10198.1.1|Name=mRNA_D-mesarthrocarpus_Contig10198.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1079bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10198:93..1171+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10198:93..1171+ >mRNA_D-mesarthrocarpus_Contig10198.1.1 ID=mRNA_D-mesarthrocarpus_Contig10198.1.1|Name=mRNA_D-mesarthrocarpus_Contig10198.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=570bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10198:93..1171+ (Discosporangium mesarthrocarpum MT17_79)back to top |