mRNA_D-mesarthrocarpus_Contig9996.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9996.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9996.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9996.1.1 vs. uniprot
Match: D7FKL7_ECTSI (HU-CCDC81_euk_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKL7_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 5.610e-33
Identity = 61/104 (58.65%), Postives = 77/104 (74.04%), Query Frame = 1
Query:  232 MRIRPVFVLNHSFCRTHGLPFKRLLVQPTFTRPVEVINFTKLAIRYSQNLTKDMVYGALREIFRGIGDAISKGLHVGICFSFGVLEVHEGKVHFSFDPVSLAKD 543
            MR+RPVF+LN  FCR H LP KR+L  P F +  E +N++KLAIRY+  +TKDMVYGALRE+FRGIGDA+S G  V + FSFG LEV E K  F+FD  +L ++
Sbjct:    1 MRLRPVFILNEGFCRAHDLPHKRILRPPLFRKAAEAVNYSKLAIRYTTFMTKDMVYGALREVFRGIGDAMSSGGQVSVVFSFGTLEVKERKFQFTFDCAALCRN 104          
BLAST of mRNA_D-mesarthrocarpus_Contig9996.1.1 vs. uniprot
Match: A0A067BGL6_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BGL6_SAPPC)

HSP 1 Score: 101 bits (251), Expect = 1.100e-22
Identity = 52/169 (30.77%), Postives = 86/169 (50.89%), Query Frame = 1
Query:   37 ISGLCMDVKGKPVGIS-QLGRSREPLWKAWGILNQWALEKLQHREAIDVPSFARVGWQRFRKLSGEMRIRPVFVLNHSFCRTHGLPFKRLLVQPTFTRPVEVINFTKLAIRYSQNLTKDMVYGALREIFRGIGDAISKGLHVGICFSFGVLEVHEGKVHFSFDPVSLAK 540
            +  L  D  GK    S    + +E L + W  LN W   +    +   +  F ++ W+         ++RP+F+LN +F +T+GL +K+ +  P     +E INFTKLAI++S+NLTKD+V+  +R++   IG+  S G  + I  + G +      +H  FDP    K
Sbjct:    4 LRNLLQDCSGKMTRTSCAADKKKETLEEVWIALNAWVEARYHEGKGAHIAPFGKISWETLTIGRNTRKVRPIFMLNDTFGKTYGLQYKKRVTVP-IVAAIEDINFTKLAIKFSKNLTKDVVFCGVRDLLHKIGEVASTGAQMTIEMTIGKIVAKNRAIHLLFDPTQFPK 171          
BLAST of mRNA_D-mesarthrocarpus_Contig9996.1.1 vs. uniprot
Match: A0A067BSZ3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BSZ3_SAPPC)

HSP 1 Score: 103 bits (256), Expect = 2.360e-22
Identity = 53/169 (31.36%), Postives = 87/169 (51.48%), Query Frame = 1
Query:   37 ISGLCMDVKGKPVGIS-QLGRSREPLWKAWGILNQWALEKLQHREAIDVPSFARVGWQRFRKLSGEMRIRPVFVLNHSFCRTHGLPFKRLLVQPTFTRPVEVINFTKLAIRYSQNLTKDMVYGALREIFRGIGDAISKGLHVGICFSFGVLEVHEGKVHFSFDPVSLAK 540
            +  L  D  GK    S    + +E L + W  LN W   + Q  +   +  F ++ W+         ++RP+F+LN +F +T+GL +K+ +  P     +E INFTKLAI++S+NLTKD+V+  +R++   IG+  S G  + I  + G +      +H  FDP    K
Sbjct:    4 LRNLLQDCSGKMTRTSCAADKKKETLEEVWIALNAWVEARYQEGKGAHIAPFGKISWETLTIGRNTRKVRPIFMLNDTFGKTYGLQYKKRVTVP-IVAAIEDINFTKLAIKFSKNLTKDVVFCGVRDLLHKIGEVASTGAQMTIEMTIGKIVAKNRAIHLLFDPTQFPK 171          
BLAST of mRNA_D-mesarthrocarpus_Contig9996.1.1 vs. uniprot
Match: A0A024TXI9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXI9_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.520e-22
Identity = 51/167 (30.54%), Postives = 87/167 (52.10%), Query Frame = 1
Query:   46 LCMDVKGKPVGISQLG-RSREPLWKAWGILNQWALEKLQHREAIDVPSFARVGWQRFRKLSGEMRIRPVFVLNHSFCRTHGLPFKRLLVQPTFTRPVEVINFTKLAIRYSQNLTKDMVYGALREIFRGIGDAISKGLHVGICFSFGVLEVHEGKVHFSFDPVSLAKD 543
            L  D  GK    S    + +E L + W  LN W   +    + ++V  F ++ W+         ++RP+F+L+ ++ +T+GL +K+ +  P    P+E INFTK+AI++S+NL KD V+  +R++   IG+  S G  + I  + G +      VH  FDP    K+
Sbjct:    7 LLSDCSGKMTRTSCAAEKKKETLEEVWAALNAWIEARYNEGKGVNVAPFCKISWETVTISRNTRKLRPIFILHETYAKTYGLHYKKRITAPDIA-PLEDINFTKIAIKFSKNLNKDTVFSGVRDLLHKIGEIASTGAQMAIEMTMGKIVAKNRAVHMLFDPKLFPKN 172          
BLAST of mRNA_D-mesarthrocarpus_Contig9996.1.1 vs. uniprot
Match: A0A1W0A7S2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7S2_9STRA)

HSP 1 Score: 102 bits (255), Expect = 3.140e-22
Identity = 49/149 (32.89%), Postives = 82/149 (55.03%), Query Frame = 1
Query:   94 RSREPLWKAWGILNQWALEKLQHREAIDVPSFARVGWQRFRKLSGEMRIRPVFVLNHSFCRTHGLPFKRLLVQPTFTRPVEVINFTKLAIRYSQNLTKDMVYGALREIFRGIGDAISKGLHVGICFSFGVLEVHEGKVHFSFDPVSLAK 540
            + +E L + W  LN W   +    + + V  F ++ W+         +IRP+F+LN ++ +T+GL +K+ +  P     +E INFTKLAI+YS+NLTKD+V+  +R++   IG+  S G  + I  + G +      +H  FDP  + K
Sbjct:   24 KKKEILEEVWMALNAWIEARYNDGKGVHVAPFCKISWETITVGRNTRKIRPIFLLNDTYGKTYGLHYKKRVTVP-IVAAIEDINFTKLAIKYSKNLTKDIVFSGVRDLLHKIGEIASTGAQMSIELTIGKIVAKNKAIHMIFDPKQIPK 171          
BLAST of mRNA_D-mesarthrocarpus_Contig9996.1.1 vs. uniprot
Match: F0YCP0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCP0_AURAN)

HSP 1 Score: 102 bits (255), Expect = 3.770e-22
Identity = 55/157 (35.03%), Postives = 85/157 (54.14%), Query Frame = 1
Query:  109 LWKAWGILNQWALEKLQHREAIDVPSFARVGWQRF--------------RKLSGEMRIRPVFVLNHSFCRTHGLPFKRLLVQPTFTRPVEVINFTKLAIRYSQNLTKDMVYGALREIFRGIGDAISKGLHVGICFSFGVLEVHEGKVHFSFDPVSLA 537
            L +AW  LN W L+++  R    VP+F +  WQ                +K + ++ +RPVF+   +FCR+HGLP++R             ++++ LA+RYS +LTKDMV+ ALR++ R +G+ I+ G  + +  S G L    GK  F FD  SLA
Sbjct:   31 LREAWDALNAWILDRVIQRRGAAVPNFGKFTWQVLGGFTPADLDPRLAGKKAASKIPLRPVFMFAENFCRSHGLPWRRQ--NEADLVKCGDLDYSNLALRYSSHLTKDMVFAALRDVTRRVGEKIASGFALRVKMSVGSLVCEHGKCRFEFDAASLA 185          
BLAST of mRNA_D-mesarthrocarpus_Contig9996.1.1 vs. uniprot
Match: G4YXB9_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YXB9_PHYSP)

HSP 1 Score: 102 bits (254), Expect = 4.120e-22
Identity = 50/149 (33.56%), Postives = 82/149 (55.03%), Query Frame = 1
Query:   94 RSREPLWKAWGILNQWALEKLQHREAIDVPSFARVGWQRFRKLSGEMRIRPVFVLNHSFCRTHGLPFKRLLVQPTFTRPVEVINFTKLAIRYSQNLTKDMVYGALREIFRGIGDAISKGLHVGICFSFGVLEVHEGKVHFSFDPVSLAK 540
            R RE L   W   N W   +    + + + +FA + W+ F     + ++RP+F L+ +F +T+GL  +R  +       +E INFTK+AI++S NLTKD+V+ A+R++ + IG   S G+ + I F+FG L      V   FDP+   +
Sbjct:   26 RKRETLEDVWRAFNDWIESRFNQGKGVHIATFATITWETFTNSRNQPKLRPIFFLSDTFIKTYGLSQRRPPLPSANLASLEDINFTKIAIKFSHNLTKDLVFCAIRDMVQKIGMVASTGVPMSIAFNFGRLIAKNRCVSVLFDPLKFPR 174          
BLAST of mRNA_D-mesarthrocarpus_Contig9996.1.1 vs. uniprot
Match: H3GLA0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLA0_PHYRM)

HSP 1 Score: 102 bits (253), Expect = 5.320e-22
Identity = 51/147 (34.69%), Postives = 80/147 (54.42%), Query Frame = 1
Query:   94 RSREPLWKAWGILNQWALEKLQHREAIDVPSFARVGWQRFRKLSGEMRIRPVFVLNHSFCRTHGLPFKRLLVQPTFTRPVEVINFTKLAIRYSQNLTKDMVYGALREIFRGIGDAISKGLHVGICFSFGVLEVHEGKVHFSFDPVSL 534
            R RE L   W   N W   +    + + + +FA + W+ F     + ++RP F L+ +F +T+G+  KR  +       +E INFTK+AIR+S NLTKD+V+ A+R++ + IG   S G+ + I F+FG L      V   FDP+  
Sbjct:   26 RKRETLEDVWRAFNDWIESRFSQGKGVHIATFATITWETFTNARNQPKLRPTFFLSDTFIKTYGVSQKRPPLPNANLASLEDINFTKIAIRFSHNLTKDLVFCAIRDMVQQIGMVASTGVPMSIAFNFGRLIAKNRCVSVLFDPLKF 172          
BLAST of mRNA_D-mesarthrocarpus_Contig9996.1.1 vs. uniprot
Match: A0A1V9YYG5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYG5_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.110e-21
Identity = 52/169 (30.77%), Postives = 86/169 (50.89%), Query Frame = 1
Query:   37 ISGLCMDVKGKPVGIS-QLGRSREPLWKAWGILNQWALEKLQHREAIDVPSFARVGWQRFRKLSGEMRIRPVFVLNHSFCRTHGLPFKRLLVQPTFTRPVEVINFTKLAIRYSQNLTKDMVYGALREIFRGIGDAISKGLHVGICFSFGVLEVHEGKVHFSFDPVSLAK 540
            +  L  D  GK    S    + +E L + W  LN W   +    + + +  F ++ W+         ++RP+F+LN +F +T+GL +K+ L  P     +E INFTKLAI++S+NLTKD V+  +R++   IG+  + G  + I  + G +      +H  FDP    K
Sbjct:    4 LRNLLQDCSGKMTRTSCAADKKKETLEEVWLALNAWVEARYNDGKGVHIAPFGKISWETITIGRNTRKVRPIFLLNDTFGKTYGLQYKKRLTVPIIAA-IEDINFTKLAIKFSKNLTKDTVFCGVRDLLHKIGEIAATGAQMTIEMTIGKIVAKNRAIHMLFDPTQFPK 171          
BLAST of mRNA_D-mesarthrocarpus_Contig9996.1.1 vs. uniprot
Match: A0A2P4XRT6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XRT6_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.900e-21
Identity = 49/147 (33.33%), Postives = 81/147 (55.10%), Query Frame = 1
Query:   94 RSREPLWKAWGILNQWALEKLQHREAIDVPSFARVGWQRFRKLSGEMRIRPVFVLNHSFCRTHGLPFKRLLVQPTFTRPVEVINFTKLAIRYSQNLTKDMVYGALREIFRGIGDAISKGLHVGICFSFGVLEVHEGKVHFSFDPVSL 534
            + +E L   W   N W   +  H + + + +FA + W+ F     + ++RP F L+ +F +T+GL  KR  +       +E INFTK+AI++S NLTKD+V+ A+R++ + IG   S G+ + I F+FG L      +   FDP+  
Sbjct:   26 QKKETLEDVWRAFNDWIESRFNHGKGVHIATFATITWETFTNSRNQPKLRPTFFLSDTFVKTYGLSQKRPPLPSANLASLEDINFTKIAIKFSHNLTKDLVFCAIRDMVQKIGMVASTGVAMSIEFNFGRLIAKNRCISVLFDPLKF 172          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9996.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKL7_ECTSI5.610e-3358.65HU-CCDC81_euk_2 domain-containing protein n=1 Tax=... [more]
A0A067BGL6_SAPPC1.100e-2230.77Uncharacterized protein (Fragment) n=1 Tax=Saprole... [more]
A0A067BSZ3_SAPPC2.360e-2231.36Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A024TXI9_9STRA2.520e-2230.54Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A1W0A7S2_9STRA3.140e-2232.89Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
F0YCP0_AURAN3.770e-2235.03Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
G4YXB9_PHYSP4.120e-2233.56Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
H3GLA0_PHYRM5.320e-2234.69Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A1V9YYG5_9STRA1.110e-2130.77Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A2P4XRT6_9STRA1.900e-2133.33Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9996contigD-mesarthrocarpus_Contig9996:3102..4116 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FKL7
PFAMsDUF4496
Model size543
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue9.2e-34
EggNOG OGs2C7PM@1|root,2RCZ3@2759|Eukaryota
Ec32 ortholog descriptionDomain of unknown function DUF4496
Ec32 orthologEc-09_000680.1
DescriptionDomain of unknown function (DUF4496)
Cds size543
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791148.4810247-CDS-D-mesarthrocarpus_Contig9996:3101..32181680791148.4810247-CDS-D-mesarthrocarpus_Contig9996:3101..3218Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9996 3102..3218 -
1680791148.492345-CDS-D-mesarthrocarpus_Contig9996:3547..37421680791148.492345-CDS-D-mesarthrocarpus_Contig9996:3547..3742Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9996 3548..3742 -
1680791148.506051-CDS-D-mesarthrocarpus_Contig9996:3885..41161680791148.506051-CDS-D-mesarthrocarpus_Contig9996:3885..4116Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9996 3886..4116 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9996.1.1prot_D-mesarthrocarpus_Contig9996.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9996 3102..4116 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9996.1.1

>prot_D-mesarthrocarpus_Contig9996.1.1 ID=prot_D-mesarthrocarpus_Contig9996.1.1|Name=mRNA_D-mesarthrocarpus_Contig9996.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=181bp
MLSTEKVTIETIISGLCMDVKGKPVGISQLGRSREPLWKAWGILNQWALE
KLQHREAIDVPSFARVGWQRFRKLSGEMRIRPVFVLNHSFCRTHGLPFKR
LLVQPTFTRPVEVINFTKLAIRYSQNLTKDMVYGALREIFRGIGDAISKG
LHVGICFSFGVLEVHEGKVHFSFDPVSLAKD
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mRNA from alignment at D-mesarthrocarpus_Contig9996:3102..4116-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9996.1.1 ID=mRNA_D-mesarthrocarpus_Contig9996.1.1|Name=mRNA_D-mesarthrocarpus_Contig9996.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1015bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9996:3102..4116- (Discosporangium mesarthrocarpum MT17_79)
ATGTTGTCCACTGAGAAGGTAACCATTGAAACGATTATTTCAGGGCTCTG TATGGATGTCAAAGGCAAGCCCGTTGGCATTAGCCAGTTGGGTCGGTCAC GGGAGCCCTTATGGAAAGCTTGGGGCATCCTCAACCAATGGGCGCTGGAA AAGCTGCAACATCGAGAGGCCATTGACGTTCCATCGTTCGCCCGAGTGGG GTGGCAACGTTTTAGAAAGCTAAGCGGAGAGGTAATACTATGGTTATATT TTATTGCTGGCATTAGGGGTTCGTTGTAGCTCGAGAATCCCAAAACCTGG AGATTCTGCTCGATGTCCACCATCACACAACACGGAGCTGAGATCACGTG CCTCATGCTGGCTCCACTGCACAGATGCGCATCAGGCCTGTCTTTGTCCT CAATCATAGTTTTTGTCGCACTCATGGCCTACCGTTTAAGCGCCTGCTGG TTCAGCCGACTTTCACGCGTCCTGTGGAAGTAATCAACTTCACCAAGCTT GCGATACGCTACTCTCAAAACCTCACCAAGGACATGGTCTATGGAGCGTT GCGTGAGATATTCCGTGGGGTGAGTGAGCCAGGATGCACATGCTCTTCAT GAGTGTTGCGCAGAATCAGGATCTAGGTCGATCCAAATATTTGCGGCGTG GAGGCCTCAGTTCGTGAGGCTTGTCAGGTGTCACAAGCGAATTGTACTAT GTCAAGTAAATCGGTTTAGGTTATCCACAATTTCGAATATCAGCTATATT GACCGGGTGAAAAAGAGGTACCCTTGTTCTTGAGCTGTGAAGCTCTGTTG AGGGACATATTTATACCTTTCGGCTGCCAATCATTTATTTCGAAACGTGT GAAGAATCCAATCGCACTAACTCTCCCGTGTCCTACGTTCTCGGACAGAT CGGGGACGCCATCTCCAAAGGCCTTCACGTTGGGATATGTTTCTCCTTTG GTGTGTTGGAGGTTCATGAAGGCAAGGTGCACTTTTCCTTCGACCCCGTG TCCCTTGCCAAGGAT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9996:3102..4116-

>mRNA_D-mesarthrocarpus_Contig9996.1.1 ID=mRNA_D-mesarthrocarpus_Contig9996.1.1|Name=mRNA_D-mesarthrocarpus_Contig9996.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=543bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9996:3102..4116- (Discosporangium mesarthrocarpum MT17_79)
ATGTTGTCCACTGAGAAGGTAACCATTGAAACGATTATTTCAGGGCTCTG
TATGGATGTCAAAGGCAAGCCCGTTGGCATTAGCCAGTTGGGTCGGTCAC
GGGAGCCCTTATGGAAAGCTTGGGGCATCCTCAACCAATGGGCGCTGGAA
AAGCTGCAACATCGAGAGGCCATTGACGTTCCATCGTTCGCCCGAGTGGG
GTGGCAACGTTTTAGAAAGCTAAGCGGAGAGATGCGCATCAGGCCTGTCT
TTGTCCTCAATCATAGTTTTTGTCGCACTCATGGCCTACCGTTTAAGCGC
CTGCTGGTTCAGCCGACTTTCACGCGTCCTGTGGAAGTAATCAACTTCAC
CAAGCTTGCGATACGCTACTCTCAAAACCTCACCAAGGACATGGTCTATG
GAGCGTTGCGTGAGATATTCCGTGGGATCGGGGACGCCATCTCCAAAGGC
CTTCACGTTGGGATATGTTTCTCCTTTGGTGTGTTGGAGGTTCATGAAGG
CAAGGTGCACTTTTCCTTCGACCCCGTGTCCCTTGCCAAGGAT
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