mRNA_D-mesarthrocarpus_Contig9992.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9992.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9992.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig9992.1.1 vs. uniprot
Match: D7FVE5_ECTSI (Glutamine-dependent NAD(+) synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE5_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 8.210e-14
Identity = 38/59 (64.41%), Postives = 48/59 (81.36%), Query Frame = 1 
Query:    1 QVVTATINLEDVRAFRASRSSLMEQASDAKSLPKVVAPCGFSLTTPGADYLSMPPTLPR 177
            +V+TAT+NLEDVR++RAS SS MEQAS A+ LP V AP  F L TPGA+Y++ PPTLP+
Sbjct:  274 EVITATVNLEDVRSYRASVSSRMEQASGARRLPTVEAP-SFCLGTPGANYVTHPPTLPQ 331
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BLAST of mRNA_D-mesarthrocarpus_Contig9992.1.1 vs. uniprot
Match: A0A6H5JI49_9PHAE (NAD(+) synthase (glutamine-hydrolyzing) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI49_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 8.220e-14
Identity = 38/59 (64.41%), Postives = 48/59 (81.36%), Query Frame = 1 
Query:    1 QVVTATINLEDVRAFRASRSSLMEQASDAKSLPKVVAPCGFSLTTPGADYLSMPPTLPR 177
            +V+TAT+NLEDVR++RAS SS MEQAS A+ LP V AP  F L TPGA+Y++ PPTLP+
Sbjct:  348 EVITATVNLEDVRSYRASVSSRMEQASGARRLPTVEAP-SFCLGTPGANYVTHPPTLPQ 405
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9992.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVE5_ECTSI8.210e-1464.41Glutamine-dependent NAD(+) synthetase n=1 Tax=Ecto... [more]
A0A6H5JI49_9PHAE8.220e-1464.41NAD(+) synthase (glutamine-hydrolyzing) n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9992contigD-mesarthrocarpus_Contig9992:74..253 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FVE5
PFAMsCN_hydrolase,NAD_synthase
Model size180
Max annot lvl2759|Eukaryota
KEGG rclassRC00010,RC00100
KEGG koko:K01950
KEGG ReactionR00257
KEGG Pathwayko00760,ko01100,map00760,map01100
KEGG ModuleM00115
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0010259,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0032501,GO:0032502,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0048856,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons1
Evalue1.35e-14
EggNOG OGsCOG0171@1|root,KOG2303@2759|Eukaryota
EC6.3.5.1
DescriptionNAD synthase (glutamine-hydrolyzing) activity
Cds size180
COG categoryH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791148.409736-CDS-D-mesarthrocarpus_Contig9992:73..2531680791148.409736-CDS-D-mesarthrocarpus_Contig9992:73..253Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9992 74..253 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9992.1.1prot_D-mesarthrocarpus_Contig9992.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9992 74..253 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9992.1.1

>prot_D-mesarthrocarpus_Contig9992.1.1 ID=prot_D-mesarthrocarpus_Contig9992.1.1|Name=mRNA_D-mesarthrocarpus_Contig9992.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=60bp
QVVTATINLEDVRAFRASRSSLMEQASDAKSLPKVVAPCGFSLTTPGADY
LSMPPTLPRP
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mRNA from alignment at D-mesarthrocarpus_Contig9992:74..253-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9992.1.1 ID=mRNA_D-mesarthrocarpus_Contig9992.1.1|Name=mRNA_D-mesarthrocarpus_Contig9992.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=180bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9992:74..253- (Discosporangium mesarthrocarpum MT17_79)
CAGGTCGTGACGGCCACCATCAACCTAGAGGACGTGCGTGCCTTCCGTGC
CTCCAGGAGCTCCCTGATGGAGCAGGCCAGCGATGCAAAAAGCCTCCCCA
AGGTGGTGGCGCCGTGCGGCTTCTCCCTGACCACCCCTGGGGCAGACTAC
CTGTCCATGCCCCCCACGCTGCCGAGGCCT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9992:74..253-

>mRNA_D-mesarthrocarpus_Contig9992.1.1 ID=mRNA_D-mesarthrocarpus_Contig9992.1.1|Name=mRNA_D-mesarthrocarpus_Contig9992.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=180bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9992:74..253- (Discosporangium mesarthrocarpum MT17_79)
CAGGTCGTGACGGCCACCATCAACCTAGAGGACGTGCGTGCCTTCCGTGC
CTCCAGGAGCTCCCTGATGGAGCAGGCCAGCGATGCAAAAAGCCTCCCCA
AGGTGGTGGCGCCGTGCGGCTTCTCCCTGACCACCCCTGGGGCAGACTAC
CTGTCCATGCCCCCCACGCTGCCGAGGCCT
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