prot_D-mesarthrocarpus_Contig9968.2.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9968.2.1
Unique Nameprot_D-mesarthrocarpus_Contig9968.2.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length367
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig9968.2.1 vs. uniprot
Match: K0SL39_THAOC (C3H1-type domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SL39_THAOC)

HSP 1 Score: 49.7 bits (117), Expect = 9.740e-5
Identity = 25/36 (69.44%), Postives = 27/36 (75.00%), Query Frame = 0 
Query:    1 MPKAK-YTLVNT-GDGPKDCAFFDSEMGCRNGSNCK 34
            M K K Y L ++ GDGPK CAFF SE GCRNGSNCK
Sbjct:   13 MGKTKGYKLTSSSGDGPKVCAFFFSEQGCRNGSNCK 48
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9968.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
K0SL39_THAOC9.740e-569.44C3H1-type domain-containing protein (Fragment) n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 295..322
e-value: 11.0
score: 7.9
coord: 12..39
e-value: 0.75
score: 17.3
coord: 216..241
e-value: 0.02
score: 24.1
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 12..40
score: 11.234623
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 295..323
score: 11.779191
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 214..242
score: 11.27218
NoneNo IPR availableGENE3D4.10.1000.10coord: 203..324
e-value: 5.6E-9
score: 37.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..148
NoneNo IPR availablePANTHERPTHR33400ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATEDcoord: 300..322
NoneNo IPR availablePANTHERPTHR33400ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATEDcoord: 16..40
NoneNo IPR availablePANTHERPTHR33400ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATEDcoord: 96..240
NoneNo IPR availablePANTHERPTHR33400:SF9ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATEDcoord: 300..322
coord: 16..40
NoneNo IPR availablePANTHERPTHR33400:SF9ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATEDcoord: 96..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9968contigD-mesarthrocarpus_Contig9968:1676..2776 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9968.2.1mRNA_D-mesarthrocarpus_Contig9968.2.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9968 1533..2776 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9968.2.1 ID=prot_D-mesarthrocarpus_Contig9968.2.1|Name=mRNA_D-mesarthrocarpus_Contig9968.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=367bp
MPKAKYTLVNTGDGPKDCAFFDSEMGCRNGSNCKFIHAGEATEGSLSQLK
KAVVAPLGPATATALGPVSASPPAPASAPAPATVPVVDKPITPPASAKKR
KGKSKKRGADEVSAAMVEASLPPPTPAAQAGPTPKKRRNKKGQQTVEVAA
PASPALQQTDIVYLPQPAPIQFPVKVVSQDPAQTPSLPPVANGGGVHVAI
PTDQDNNGRAPQKKANEKVCSFYNKKSGCKSGALCPFLHVGEAGGGNGGT
RGRAKPADPQGGPKKSPGPKQKKNTRKARSQTPIRNPAPAPAPAPPAVPK
CLFFPTPMGCKNGSACPFVHERTGGSTATPPSALLSAPPSVPPSTSALSP
APKAARVPSPAHAQPPA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH