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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Seed ortholog | 2880.D7FI85 |
| PFAMs | EloA-BP1,RNase_T,zf-CCCH |
| Model size | 1244 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K14570 |
| KEGG Pathway | ko03008,map03008 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Evalue | 6.58e-07 |
| EggNOG OGs | COG0847@1|root,KOG2248@2759|Eukaryota |
| Description | exonuclease activity |
| Cds size | 1101 |
| COG category | L |
| BRITE | ko00000,ko00001,ko01000,ko03009 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791146.3773694-UTR-D-mesarthrocarpus_Contig9968:1532..1675 | 1680791146.3773694-UTR-D-mesarthrocarpus_Contig9968:1532..1675 | Discosporangium mesarthrocarpum MT17_79 | UTR | D-mesarthrocarpus_Contig9968 1533..1675 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791146.3919852-CDS-D-mesarthrocarpus_Contig9968:1675..2776 | 1680791146.3919852-CDS-D-mesarthrocarpus_Contig9968:1675..2776 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig9968 1676..2776 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9968.2.1 >prot_D-mesarthrocarpus_Contig9968.2.1 ID=prot_D-mesarthrocarpus_Contig9968.2.1|Name=mRNA_D-mesarthrocarpus_Contig9968.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=367bp
MPKAKYTLVNTGDGPKDCAFFDSEMGCRNGSNCKFIHAGEATEGSLSQLK
KAVVAPLGPATATALGPVSASPPAPASAPAPATVPVVDKPITPPASAKKR
KGKSKKRGADEVSAAMVEASLPPPTPAAQAGPTPKKRRNKKGQQTVEVAA
PASPALQQTDIVYLPQPAPIQFPVKVVSQDPAQTPSLPPVANGGGVHVAI
PTDQDNNGRAPQKKANEKVCSFYNKKSGCKSGALCPFLHVGEAGGGNGGT
RGRAKPADPQGGPKKSPGPKQKKNTRKARSQTPIRNPAPAPAPAPPAVPK
CLFFPTPMGCKNGSACPFVHERTGGSTATPPSALLSAPPSVPPSTSALSP
APKAARVPSPAHAQPPA back to topmRNA from alignment at D-mesarthrocarpus_Contig9968:1533..2776+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-mesarthrocarpus_Contig9968.2.1 ID=mRNA_D-mesarthrocarpus_Contig9968.2.1|Name=mRNA_D-mesarthrocarpus_Contig9968.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1244bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9968:1533..2776+ (Discosporangium mesarthrocarpum MT17_79)
ATCACAGATCAGGACCATCCCTGTCTGGTAGACTCTAACCCAGGCACTCC
CGTTGAAGGTAAACCATAAATCTATAAGTGGGCTACGGGCCTACCAGGCT
CGGGTACTCCTCCGTAGCCCCCAGGCGCACTAAACGGGGCACCATGCCAA
AGGCCAAGTACACGCTGGTTAACACTGGAGACGGCCCCAAGGACTGCGCC
TTCTTCGATTCTGAGATGGGATGCAGGAATGGATCCAACTGTAAGTTCAT
TCATGCCGGGGAGGCGACGGAAGGATCTCTATCCCAGTTGAAGAAGGCAG
TTGTGGCTCCCCTAGGTCCCGCTACGGCTACTGCACTGGGTCCAGTCTCA
GCCTCTCCACCTGCCCCAGCTTCGGCTCCAGCACCTGCAACAGTCCCAGT
GGTCGATAAGCCTATTACGCCGCCAGCGTCGGCAAAGAAAAGAAAGGGAA
AGTCGAAGAAGAGAGGCGCGGACGAGGTCTCTGCCGCGATGGTTGAAGCC
TCACTACCACCACCAACCCCTGCAGCTCAAGCTGGCCCCACCCCGAAGAA
GCGTCGCAACAAGAAGGGTCAGCAGACCGTAGAGGTTGCGGCCCCAGCAA
GCCCGGCACTGCAGCAGACGGATATTGTCTATTTGCCCCAGCCTGCGCCG
ATACAGTTTCCCGTGAAGGTTGTGTCTCAAGACCCTGCGCAGACACCCTC
CTTGCCTCCAGTTGCGAACGGGGGAGGGGTGCACGTGGCGATCCCTACAG
ACCAGGACAACAATGGTAGGGCGCCGCAGAAGAAGGCAAACGAGAAGGTG
TGCTCTTTCTATAACAAGAAGTCGGGGTGCAAGTCGGGGGCCCTATGTCC
CTTCCTCCACGTGGGGGAGGCAGGTGGCGGCAACGGGGGTACGCGCGGAC
GCGCGAAGCCAGCTGATCCCCAGGGAGGCCCAAAGAAATCTCCCGGCCCC
AAGCAAAAAAAGAACACCCGAAAGGCGCGCTCTCAGACTCCGATCAGGAA
CCCAGCACCTGCTCCTGCCCCGGCCCCGCCGGCCGTTCCGAAGTGCCTAT
TTTTCCCGACTCCCATGGGATGCAAGAACGGATCCGCCTGCCCCTTCGTT
CATGAAAGGACTGGCGGTAGCACCGCAACCCCTCCCTCGGCTCTTCTTTC
GGCTCCTCCCTCAGTTCCTCCCTCGACTTCTGCCCTGTCTCCTGCCCCCA
AGGCAGCCCGTGTCCCTTCCCCTGCCCACGCCCAACCTCCCGCC back to topCoding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9968:1533..2776+ >mRNA_D-mesarthrocarpus_Contig9968.2.1 ID=mRNA_D-mesarthrocarpus_Contig9968.2.1|Name=mRNA_D-mesarthrocarpus_Contig9968.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1101bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9968:1533..2776+ (Discosporangium mesarthrocarpum MT17_79)
ATGCCAAAGGCCAAGTACACGCTGGTTAACACTGGAGACGGCCCCAAGGA
CTGCGCCTTCTTCGATTCTGAGATGGGATGCAGGAATGGATCCAACTGTA
AGTTCATTCATGCCGGGGAGGCGACGGAAGGATCTCTATCCCAGTTGAAG
AAGGCAGTTGTGGCTCCCCTAGGTCCCGCTACGGCTACTGCACTGGGTCC
AGTCTCAGCCTCTCCACCTGCCCCAGCTTCGGCTCCAGCACCTGCAACAG
TCCCAGTGGTCGATAAGCCTATTACGCCGCCAGCGTCGGCAAAGAAAAGA
AAGGGAAAGTCGAAGAAGAGAGGCGCGGACGAGGTCTCTGCCGCGATGGT
TGAAGCCTCACTACCACCACCAACCCCTGCAGCTCAAGCTGGCCCCACCC
CGAAGAAGCGTCGCAACAAGAAGGGTCAGCAGACCGTAGAGGTTGCGGCC
CCAGCAAGCCCGGCACTGCAGCAGACGGATATTGTCTATTTGCCCCAGCC
TGCGCCGATACAGTTTCCCGTGAAGGTTGTGTCTCAAGACCCTGCGCAGA
CACCCTCCTTGCCTCCAGTTGCGAACGGGGGAGGGGTGCACGTGGCGATC
CCTACAGACCAGGACAACAATGGTAGGGCGCCGCAGAAGAAGGCAAACGA
GAAGGTGTGCTCTTTCTATAACAAGAAGTCGGGGTGCAAGTCGGGGGCCC
TATGTCCCTTCCTCCACGTGGGGGAGGCAGGTGGCGGCAACGGGGGTACG
CGCGGACGCGCGAAGCCAGCTGATCCCCAGGGAGGCCCAAAGAAATCTCC
CGGCCCCAAGCAAAAAAAGAACACCCGAAAGGCGCGCTCTCAGACTCCGA
TCAGGAACCCAGCACCTGCTCCTGCCCCGGCCCCGCCGGCCGTTCCGAAG
TGCCTATTTTTCCCGACTCCCATGGGATGCAAGAACGGATCCGCCTGCCC
CTTCGTTCATGAAAGGACTGGCGGTAGCACCGCAACCCCTCCCTCGGCTC
TTCTTTCGGCTCCTCCCTCAGTTCCTCCCTCGACTTCTGCCCTGTCTCCT
GCCCCCAAGGCAGCCCGTGTCCCTTCCCCTGCCCACGCCCAACCTCCCGC
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