prot_D-mesarthrocarpus_Contig9963.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9963.1.1
Unique Nameprot_D-mesarthrocarpus_Contig9963.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length293
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: A0A6H5JM24_9PHAE (RNB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JM24_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 2.930e-68
Identity = 134/275 (48.73%), Postives = 167/275 (60.73%), Query Frame = 0
Query:   11 QREHMGALVPSNLLTGSGFLSDRDSYLLFHPSDSRVPHMLIARRDCPTHFLEVTPNPKKPVFYEGMDGCFFLGGGEEGGGWGEPTPAGSSGVAYTNSIFIARLKPTWSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTVEVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQ 285
            + +HMG+LV S+ L   G LSD+DSY++FHP+D RVPHMLIAR + P+ F++   NP                                   AY N IF+A +K TWS  SKLPWG  VR +GEAG I  ET ALL QH VNHG+FPR VL  L                    +    K  E   D GA+ RGS WKIP+ E+++RRDLR TR+FTIDP+ A+DLDDAL +TPL DGT E+GVHIADV++F +P S+LD+EA+RR TTVYLVQQ
Sbjct:  231 REDHMGSLVWSSPLKVDGKLSDKDSYVMFHPTDRRVPHMLIARGELPSIFVD---NPG----------------------------------AYANYIFMACVKGTWSATSKLPWGHNVRFVGEAGAIHAETKALLCQHGVNHGDFPRTVLRGLE-------------------AFLPPKNAEDGIDAGADTRGSRWKIPDEEISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEIGVHIADVTYFVRPNSDLDREARRRATTVYLVQQ 449          
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: A0A4D9CMF6_9STRA (RNB domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMF6_9STRA)

HSP 1 Score: 188 bits (477), Expect = 3.100e-50
Identity = 126/284 (44.37%), Postives = 153/284 (53.87%), Query Frame = 0
Query:    3 CLHLHHRGQREHMGALVPSNLLTGSGFLSDRDSYLLFHPSDSRVPHMLIARRDCPTHFLEVTPNPKKPVFYEGMDGCFFLGGGEEGGGWGEPTPAGSSGVAYTNSIFIARLKPTWSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTVEVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQV 286
            C  L  +  RE +G L P   +     LS +D  + F PSD R P +L+ R +CP  FL+      +P+ +    G    GGG                 A+   IF+ R+K  W   S  P+GE  RCLGEAGEI  ETDALL  H V+HG+FP  VL  L ++ Q          G     G DE+ E    D G  +    W +  AEVA+RRD R  RVFTIDP TAKDLDDALH+  L DGTVEVGVHIADVS F   G+ LD EA RR TTVYLVQ+V
Sbjct:  301 CCILSAKHSRELVGRLTPRTPVAPDQPLSPKDGVVDFIPSDPRGPRLLVPRLECPYAFLQ------RPMDFVDKVGT---GGGXXXXXXXXXXXXXXGRPAF---IFLVRMKEIWKADSARPFGEQARCLGEAGEINVETDALLQSHGVDHGDFPPEVLEDLGREIQAPPKSEGLGEGXXXXGGQDEEWE----DLGPLLVSHHWTVSTAEVAKRRDFRAHRVFTIDPFTAKDLDDALHILDLGDGTVEVGVHIADVSFFVGEGTALDAEASRRATTVYLVQKV 568          
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: A0A836CGT9_9STRA (RNB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGT9_9STRA)

HSP 1 Score: 171 bits (432), Expect = 3.210e-44
Identity = 95/180 (52.78%), Postives = 115/180 (63.89%), Query Frame = 0
Query:  107 SIFIARLK-PTWSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTVEVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQ 285
            S+F A +  P WS  SK+P+ ++V  LG AGE+  ET ALL+Q+ VNHG+F   +LH+L Q                  +G D           A     GWKIP +E A RRDLR  R+FTIDP TA+DLDDALHVTPL DGTVE+GVHIADVSHF  PG ELD+EAQRR TT+YLVQ+
Sbjct:  366 SLFAAMMDVPRWSAQSKMPFAQSVWFLGHAGEVEAETTALLSQNGVNHGDFSPSLLHALDQLL---------------LNGQD-----------AGGVDGGWKIPASEAAVRRDLRDARIFTIDPPTARDLDDALHVTPLPDGTVEIGVHIADVSHFVPPGGELDREAQRRATTIYLVQR 519          
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: A0A7S2SA57_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SA57_9STRA)

HSP 1 Score: 141 bits (355), Expect = 4.910e-38
Identity = 83/172 (48.26%), Postives = 110/172 (63.95%), Query Frame = 0
Query:  115 PTWSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTVEVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQV 286
            P  S + +L    ++RC+GEAGEI  E +A+L  H+VNH +F + VL S+      R G   GA    H  GG   E E+R           W+IP  E+A RRD R  R+F+IDP+TAKDLDDALH+TP++  TVEVGVHIADVS+F + G+ +D+EA RR T+VYLV +V
Sbjct:    1 PATSRFPRLR-PRSLRCVGEAGEISAEHEAMLESHRVNHQDFSQEVLDSVHAFL--RSGDGGGAEASPHA-GGARAEVETRE----------WQIPPEELAARRDFRDKRIFSIDPTTAKDLDDALHITPIDSDTVEVGVHIADVSYFVREGTAVDQEAARRATSVYLVHKV 158          
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: A0A812XFS0_9DINO (DIS3L2 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XFS0_9DINO)

HSP 1 Score: 138 bits (347), Expect = 6.390e-33
Identity = 80/184 (43.48%), Postives = 105/184 (57.07%), Query Frame = 0
Query:  104 YTNSIFIARLKPT-WSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTVEVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQV 286
            +  S+F A +    W E S+ P G+    LGE+G I T+  A+L +H+++   F   V+  LR                         EE++R   G      GW++PE E ARRRDL    +FTIDP+TAKDLDDALH+ PL DG  EVGVHIADVSHF  PGS +D+EA+RR T+ YLV +V
Sbjct:  290 FKRSLFAAVVDDADWDERSRFPRGKLKASLGESGTIVTDLQAILQKHEIDSSAFSEAVVEELRPL----------------------TEEKARSGKG------GWRVPEEERARRRDLTSECIFTIDPTTAKDLDDALHIKPLGDGRFEVGVHIADVSHFVTPGSAVDEEARRRCTSTYLVTRV 445          
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: A0A5A8EAL7_CAFRO (RNB domain-containing protein n=6 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EAL7_CAFRO)

HSP 1 Score: 138 bits (347), Expect = 7.070e-33
Identity = 80/184 (43.48%), Postives = 105/184 (57.07%), Query Frame = 0
Query:  104 YTNSIFIARLKPT-WSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTVEVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQV 286
            +  S+F A +    W E S+ P G+    LGE+G I T+  A+L +H+++   F   V+  LR                         EE++R   G      GW++PE E ARRRDL    +FTIDP+TAKDLDDALH+ PL DG  EVGVHIADVSHF  PGS +D+EA+RR T+ YLV +V
Sbjct:  792 FKRSLFAAVVDDADWDERSRFPRGKLKASLGESGTIVTDLQAILQKHEIDSSAFSEAVVEELRPL----------------------TEEKARSGKG------GWRVPEEERARRRDLTSECIFTIDPTTAKDLDDALHIKPLGDGRFEVGVHIADVSHFVTPGSAVDEEARRRCTSTYLVTRV 947          
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: V5GGL2_IXORI (Putative exosomal 3'-5' exoribonuclease complex subunit n=4 Tax=Ixodes ricinus TaxID=34613 RepID=V5GGL2_IXORI)

HSP 1 Score: 137 bits (344), Expect = 1.280e-32
Identity = 77/184 (41.85%), Postives = 104/184 (56.52%), Query Frame = 0
Query:  104 YTNSIFIARLKPTWSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTV-EVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQV 286
            ++ ++F+A +   W   S    G+  R LG+AG++  ET+A+L  ++V+HGEFP  +L  L Q                                        WK+PE E++RRRD R   VFT+DP TA+DLDDAL   PL+DG + EVGVHIADVSHF  PG++LD+ A RR T+VYLVQQV
Sbjct:  148 FSQTLFLAEMTK-WLPDSTFAQGQLRRLLGQAGDLEVETEAILESYEVDHGEFPPDILAHLDQS---------------------------------------WKVPEEELSRRRDFRNELVFTVDPKTARDLDDALSCRPLDDGALWEVGVHIADVSHFVLPGTKLDQVALRRATSVYLVQQV 291          
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: A0A7S2KY36_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KY36_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.420e-32
Identity = 82/171 (47.95%), Postives = 102/171 (59.65%), Query Frame = 0
Query:  116 TWSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTVEVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQV 286
            +WS  SK P    VR L  +  +  ET+ALL ++ V+HG+FP  VL  + +  +         +GR          E ++   GA  +  GWK  E     RRD R  R+FTIDP+TAKDLDDALHVTPL DG VE+GVHIADVSHF Q GS +D+EA RR TTVYLV  V
Sbjct:  182 SWSSMSKWPPCTNVRKLCGSCNVEDETNALLVENGVDHGDFPAAVLRDVDKAVK---------SGRFL--------ENNKSSDGAVEKDMGWKPTEEMCRGRRDYRNHRIFTIDPTTAKDLDDALHVTPLPDGRVEIGVHIADVSHFIQSGSAVDQEALRRATTVYLVNDV 335          
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: A0A0D2UP08_CAPO3 (DIS3-like exonuclease 2 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UP08_CAPO3)

HSP 1 Score: 137 bits (344), Expect = 1.730e-32
Identity = 83/183 (45.36%), Postives = 105/183 (57.38%), Query Frame = 0
Query:  104 YTNSIFIARLKPTWSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTVEVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQV 286
            Y + +F A+L   W E S    G+ +  LG  G+I +ET A+  +H      F   VL  L          P     ++  +  D  + E    PGA+   +GW +PEAE+  RRDLR TR+FTIDP TA+DLDDALH+TPL D   EVGVHIADVS+F + GS LDKEA  R TT YLVQ V
Sbjct:  620 YKDMLFSAKLTD-WPENSSYASGKVLELLGPVGQIASETRAIRLEHHFEQERFEPKVLACLPSVAHPHA-TPTTELPKNSKAAQDPVDPEKTLPPGADP--TGWVVPEAELQTRRDLRSTRIFTIDPPTARDLDDALHITPLADDLFEVGVHIADVSYFVKEGSRLDKEAAERATTCYLVQMV 798          
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: B7PE49_IXOSC (Salivary protein Is3, putative n=1 Tax=Ixodes scapularis TaxID=6945 RepID=B7PE49_IXOSC)

HSP 1 Score: 136 bits (342), Expect = 2.630e-32
Identity = 77/184 (41.85%), Postives = 105/184 (57.07%), Query Frame = 0
Query:  104 YTNSIFIARLKPTWSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTV-EVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQV 286
            ++ ++F+A +   W   S    G+  R LG+AG++  ET+A+L  ++V+HGEFP  +L  L Q                                        WK+PE E++RRRD R   VFT+DP TA+DLDDAL   PL+DGT+ EVGVHIADVS+F  PG++LD+ A RR T+VYLVQQV
Sbjct:  203 FSQTLFLAEMTK-WLPDSTFAQGQLRRLLGQAGDLEVETEAILESYEVDHGEFPPDILAHLDQS---------------------------------------WKVPEEELSRRRDFRSELVFTVDPKTARDLDDALSCRPLDDGTLWEVGVHIADVSNFVLPGTKLDQVALRRATSVYLVQQV 346          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JM24_9PHAE2.930e-6848.73RNB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A4D9CMF6_9STRA3.100e-5044.37RNB domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A836CGT9_9STRA3.210e-4452.78RNB domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2SA57_9STRA4.910e-3848.26Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A812XFS0_9DINO6.390e-3343.48DIS3L2 protein (Fragment) n=1 Tax=Symbiodinium sp.... [more]
A0A5A8EAL7_CAFRO7.070e-3343.48RNB domain-containing protein n=6 Tax=Cafeteria ro... [more]
V5GGL2_IXORI1.280e-3241.85Putative exosomal 3'-5' exoribonuclease complex su... [more]
A0A7S2KY36_9STRA1.420e-3247.95Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A0D2UP08_CAPO31.730e-3245.36DIS3-like exonuclease 2 n=1 Tax=Capsaspora owczarz... [more]
B7PE49_IXOSC2.630e-3241.85Salivary protein Is3, putative n=1 Tax=Ixodes scap... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041505Dis3-like cold-shock domain 2PFAMPF17849OB_Dis3coord: 103..150
e-value: 4.7E-12
score: 45.7
NoneNo IPR availableGENE3D2.40.50.700coord: 12..137
e-value: 8.6E-14
score: 53.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..199
NoneNo IPR availablePANTHERPTHR23355RIBONUCLEASEcoord: 31..286
IPR001900Ribonuclease II/RPFAMPF00773RNBcoord: 217..286
e-value: 4.6E-27
score: 95.2
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 106..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9963contigD-mesarthrocarpus_Contig9963:2040..3656 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9963.1.1mRNA_D-mesarthrocarpus_Contig9963.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9963 2040..3656 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9963.1.1 ID=prot_D-mesarthrocarpus_Contig9963.1.1|Name=mRNA_D-mesarthrocarpus_Contig9963.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=293bp
RHCLHLHHRGQREHMGALVPSNLLTGSGFLSDRDSYLLFHPSDSRVPHML
IARRDCPTHFLEVTPNPKKPVFYEGMDGCFFLGGGEEGGGWGEPTPAGSS
GVAYTNSIFIARLKPTWSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQ
VNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGA
NVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTV
EVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQVGQLAIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041505Dis3_CSD2
IPR001900RNase_II/R
IPR012340NA-bd_OB-fold