mRNA_D-mesarthrocarpus_Contig9963.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9963.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9963.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: A0A6H5JM24_9PHAE (RNB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JM24_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 2.930e-68
Identity = 134/275 (48.73%), Postives = 167/275 (60.73%), Query Frame = 1
Query:   31 QREHMGALVPSNLLTGSGFLSDRDSYLLFHPSDSRVPHMLIARRDCPTHFLEVTPNPKKPVFYEGMDGCFFLGGGEEGGGWGEPTPAGSSGVAYTNSIFIARLKPTWSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTVEVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQ 855
            + +HMG+LV S+ L   G LSD+DSY++FHP+D RVPHMLIAR + P+ F++   NP                                   AY N IF+A +K TWS  SKLPWG  VR +GEAG I  ET ALL QH VNHG+FPR VL  L                    +    K  E   D GA+ RGS WKIP+ E+++RRDLR TR+FTIDP+ A+DLDDAL +TPL DGT E+GVHIADV++F +P S+LD+EA+RR TTVYLVQQ
Sbjct:  231 REDHMGSLVWSSPLKVDGKLSDKDSYVMFHPTDRRVPHMLIARGELPSIFVD---NPG----------------------------------AYANYIFMACVKGTWSATSKLPWGHNVRFVGEAGAIHAETKALLCQHGVNHGDFPRTVLRGLE-------------------AFLPPKNAEDGIDAGADTRGSRWKIPDEEISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEIGVHIADVTYFVRPNSDLDREARRRATTVYLVQQ 449          
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: A0A4D9CMF6_9STRA (RNB domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMF6_9STRA)

HSP 1 Score: 188 bits (477), Expect = 3.100e-50
Identity = 126/284 (44.37%), Postives = 153/284 (53.87%), Query Frame = 1
Query:    7 CLHLHHRGQREHMGALVPSNLLTGSGFLSDRDSYLLFHPSDSRVPHMLIARRDCPTHFLEVTPNPKKPVFYEGMDGCFFLGGGEEGGGWGEPTPAGSSGVAYTNSIFIARLKPTWSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTVEVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQV 858
            C  L  +  RE +G L P   +     LS +D  + F PSD R P +L+ R +CP  FL+      +P+ +    G    GGG                 A+   IF+ R+K  W   S  P+GE  RCLGEAGEI  ETDALL  H V+HG+FP  VL  L ++ Q          G     G DE+ E    D G  +    W +  AEVA+RRD R  RVFTIDP TAKDLDDALH+  L DGTVEVGVHIADVS F   G+ LD EA RR TTVYLVQ+V
Sbjct:  301 CCILSAKHSRELVGRLTPRTPVAPDQPLSPKDGVVDFIPSDPRGPRLLVPRLECPYAFLQ------RPMDFVDKVGT---GGGXXXXXXXXXXXXXXGRPAF---IFLVRMKEIWKADSARPFGEQARCLGEAGEINVETDALLQSHGVDHGDFPPEVLEDLGREIQAPPKSEGLGEGXXXXGGQDEEWE----DLGPLLVSHHWTVSTAEVAKRRDFRAHRVFTIDPFTAKDLDDALHILDLGDGTVEVGVHIADVSFFVGEGTALDAEASRRATTVYLVQKV 568          
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: A0A836CGT9_9STRA (RNB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGT9_9STRA)

HSP 1 Score: 171 bits (432), Expect = 3.210e-44
Identity = 95/180 (52.78%), Postives = 115/180 (63.89%), Query Frame = 1
Query:  319 SIFIARLK-PTWSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTVEVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQ 855
            S+F A +  P WS  SK+P+ ++V  LG AGE+  ET ALL+Q+ VNHG+F   +LH+L Q                  +G D           A     GWKIP +E A RRDLR  R+FTIDP TA+DLDDALHVTPL DGTVE+GVHIADVSHF  PG ELD+EAQRR TT+YLVQ+
Sbjct:  366 SLFAAMMDVPRWSAQSKMPFAQSVWFLGHAGEVEAETTALLSQNGVNHGDFSPSLLHALDQLL---------------LNGQD-----------AGGVDGGWKIPASEAAVRRDLRDARIFTIDPPTARDLDDALHVTPLPDGTVEIGVHIADVSHFVPPGGELDREAQRRATTIYLVQR 519          
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: A0A7S2SA57_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SA57_9STRA)

HSP 1 Score: 141 bits (355), Expect = 4.910e-38
Identity = 83/172 (48.26%), Postives = 110/172 (63.95%), Query Frame = 1
Query:  343 PTWSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTVEVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQV 858
            P  S + +L    ++RC+GEAGEI  E +A+L  H+VNH +F + VL S+      R G   GA    H  GG   E E+R           W+IP  E+A RRD R  R+F+IDP+TAKDLDDALH+TP++  TVEVGVHIADVS+F + G+ +D+EA RR T+VYLV +V
Sbjct:    1 PATSRFPRLR-PRSLRCVGEAGEISAEHEAMLESHRVNHQDFSQEVLDSVHAFL--RSGDGGGAEASPHA-GGARAEVETRE----------WQIPPEELAARRDFRDKRIFSIDPTTAKDLDDALHITPIDSDTVEVGVHIADVSYFVREGTAVDQEAARRATSVYLVHKV 158          
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: A0A812XFS0_9DINO (DIS3L2 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XFS0_9DINO)

HSP 1 Score: 138 bits (347), Expect = 6.390e-33
Identity = 80/184 (43.48%), Postives = 105/184 (57.07%), Query Frame = 1
Query:  310 YTNSIFIARLKPT-WSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTVEVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQV 858
            +  S+F A +    W E S+ P G+    LGE+G I T+  A+L +H+++   F   V+  LR                         EE++R   G      GW++PE E ARRRDL    +FTIDP+TAKDLDDALH+ PL DG  EVGVHIADVSHF  PGS +D+EA+RR T+ YLV +V
Sbjct:  290 FKRSLFAAVVDDADWDERSRFPRGKLKASLGESGTIVTDLQAILQKHEIDSSAFSEAVVEELRPL----------------------TEEKARSGKG------GWRVPEEERARRRDLTSECIFTIDPTTAKDLDDALHIKPLGDGRFEVGVHIADVSHFVTPGSAVDEEARRRCTSTYLVTRV 445          
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: A0A5A8EAL7_CAFRO (RNB domain-containing protein n=6 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EAL7_CAFRO)

HSP 1 Score: 138 bits (347), Expect = 7.070e-33
Identity = 80/184 (43.48%), Postives = 105/184 (57.07%), Query Frame = 1
Query:  310 YTNSIFIARLKPT-WSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTVEVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQV 858
            +  S+F A +    W E S+ P G+    LGE+G I T+  A+L +H+++   F   V+  LR                         EE++R   G      GW++PE E ARRRDL    +FTIDP+TAKDLDDALH+ PL DG  EVGVHIADVSHF  PGS +D+EA+RR T+ YLV +V
Sbjct:  792 FKRSLFAAVVDDADWDERSRFPRGKLKASLGESGTIVTDLQAILQKHEIDSSAFSEAVVEELRPL----------------------TEEKARSGKG------GWRVPEEERARRRDLTSECIFTIDPTTAKDLDDALHIKPLGDGRFEVGVHIADVSHFVTPGSAVDEEARRRCTSTYLVTRV 947          
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: V5GGL2_IXORI (Putative exosomal 3'-5' exoribonuclease complex subunit n=4 Tax=Ixodes ricinus TaxID=34613 RepID=V5GGL2_IXORI)

HSP 1 Score: 137 bits (344), Expect = 1.280e-32
Identity = 77/184 (41.85%), Postives = 104/184 (56.52%), Query Frame = 1
Query:  310 YTNSIFIARLKPTWSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTV-EVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQV 858
            ++ ++F+A +   W   S    G+  R LG+AG++  ET+A+L  ++V+HGEFP  +L  L Q                                        WK+PE E++RRRD R   VFT+DP TA+DLDDAL   PL+DG + EVGVHIADVSHF  PG++LD+ A RR T+VYLVQQV
Sbjct:  148 FSQTLFLAEMTK-WLPDSTFAQGQLRRLLGQAGDLEVETEAILESYEVDHGEFPPDILAHLDQS---------------------------------------WKVPEEELSRRRDFRNELVFTVDPKTARDLDDALSCRPLDDGALWEVGVHIADVSHFVLPGTKLDQVALRRATSVYLVQQV 291          
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: A0A7S2KY36_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KY36_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.420e-32
Identity = 82/171 (47.95%), Postives = 102/171 (59.65%), Query Frame = 1
Query:  346 TWSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTVEVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQV 858
            +WS  SK P    VR L  +  +  ET+ALL ++ V+HG+FP  VL  + +  +         +GR          E ++   GA  +  GWK  E     RRD R  R+FTIDP+TAKDLDDALHVTPL DG VE+GVHIADVSHF Q GS +D+EA RR TTVYLV  V
Sbjct:  182 SWSSMSKWPPCTNVRKLCGSCNVEDETNALLVENGVDHGDFPAAVLRDVDKAVK---------SGRFL--------ENNKSSDGAVEKDMGWKPTEEMCRGRRDYRNHRIFTIDPTTAKDLDDALHVTPLPDGRVEIGVHIADVSHFIQSGSAVDQEALRRATTVYLVNDV 335          
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: A0A0D2UP08_CAPO3 (DIS3-like exonuclease 2 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UP08_CAPO3)

HSP 1 Score: 137 bits (344), Expect = 1.730e-32
Identity = 83/183 (45.36%), Postives = 105/183 (57.38%), Query Frame = 1
Query:  310 YTNSIFIARLKPTWSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTVEVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQV 858
            Y + +F A+L   W E S    G+ +  LG  G+I +ET A+  +H      F   VL  L          P     ++  +  D  + E    PGA+   +GW +PEAE+  RRDLR TR+FTIDP TA+DLDDALH+TPL D   EVGVHIADVS+F + GS LDKEA  R TT YLVQ V
Sbjct:  620 YKDMLFSAKLTD-WPENSSYASGKVLELLGPVGQIASETRAIRLEHHFEQERFEPKVLACLPSVAHPHA-TPTTELPKNSKAAQDPVDPEKTLPPGADP--TGWVVPEAELQTRRDLRSTRIFTIDPPTARDLDDALHITPLADDLFEVGVHIADVSYFVKEGSRLDKEAAERATTCYLVQMV 798          
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Match: B7PE49_IXOSC (Salivary protein Is3, putative n=1 Tax=Ixodes scapularis TaxID=6945 RepID=B7PE49_IXOSC)

HSP 1 Score: 136 bits (342), Expect = 2.630e-32
Identity = 77/184 (41.85%), Postives = 105/184 (57.07%), Query Frame = 1
Query:  310 YTNSIFIARLKPTWSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQVNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGANVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTV-EVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQV 858
            ++ ++F+A +   W   S    G+  R LG+AG++  ET+A+L  ++V+HGEFP  +L  L Q                                        WK+PE E++RRRD R   VFT+DP TA+DLDDAL   PL+DGT+ EVGVHIADVS+F  PG++LD+ A RR T+VYLVQQV
Sbjct:  203 FSQTLFLAEMTK-WLPDSTFAQGQLRRLLGQAGDLEVETEAILESYEVDHGEFPPDILAHLDQS---------------------------------------WKVPEEELSRRRDFRSELVFTVDPKTARDLDDALSCRPLDDGTLWEVGVHIADVSNFVLPGTKLDQVALRRATSVYLVQQV 346          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9963.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JM24_9PHAE2.930e-6848.73RNB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A4D9CMF6_9STRA3.100e-5044.37RNB domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A836CGT9_9STRA3.210e-4452.78RNB domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2SA57_9STRA4.910e-3848.26Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A812XFS0_9DINO6.390e-3343.48DIS3L2 protein (Fragment) n=1 Tax=Symbiodinium sp.... [more]
A0A5A8EAL7_CAFRO7.070e-3343.48RNB domain-containing protein n=6 Tax=Cafeteria ro... [more]
V5GGL2_IXORI1.280e-3241.85Putative exosomal 3'-5' exoribonuclease complex su... [more]
A0A7S2KY36_9STRA1.420e-3247.95Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A0D2UP08_CAPO31.730e-3245.36DIS3-like exonuclease 2 n=1 Tax=Capsaspora owczarz... [more]
B7PE49_IXOSC2.630e-3241.85Salivary protein Is3, putative n=1 Tax=Ixodes scap... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9963contigD-mesarthrocarpus_Contig9963:2040..3656 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LBE7
PFAMsRNB,Rrp44_CSD1
Model size879
Max annot lvl2759|Eukaryota
KEGG koko:K18758
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000175,GO:0000178,GO:0000278,GO:0000280,GO:0000287,GO:0000291,GO:0000819,GO:0000932,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005844,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0008150,GO:0008152,GO:0008187,GO:0008266,GO:0008285,GO:0008408,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010586,GO:0010587,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019222,GO:0019439,GO:0019827,GO:0022402,GO:0022613,GO:0032501,GO:0032502,GO:0032991,GO:0034427,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0035770,GO:0036464,GO:0042127,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043632,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0046872,GO:0048285,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051276,GO:0051304,GO:0051306,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0098727,GO:0098813,GO:0140014,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1903047,GO:1905354,GO:1990074,GO:1990904
Exons4
Evalue1.98e-70
EggNOG OGsCOG0557@1|root,KOG2102@2759|Eukaryota
Description3'-5'-exoribonuclease activity
Cds size879
COG categoryK
BRITEko00000,ko01000,ko03019
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791146.0514169-CDS-D-mesarthrocarpus_Contig9963:2039..22251680791146.0514169-CDS-D-mesarthrocarpus_Contig9963:2039..2225Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9963 2040..2225 +
1680791146.0682113-CDS-D-mesarthrocarpus_Contig9963:2492..26111680791146.0682113-CDS-D-mesarthrocarpus_Contig9963:2492..2611Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9963 2493..2611 +
1680791146.0818632-CDS-D-mesarthrocarpus_Contig9963:3019..32111680791146.0818632-CDS-D-mesarthrocarpus_Contig9963:3019..3211Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9963 3020..3211 +
1680791146.0945954-CDS-D-mesarthrocarpus_Contig9963:3274..36561680791146.0945954-CDS-D-mesarthrocarpus_Contig9963:3274..3656Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9963 3275..3656 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9963.1.1prot_D-mesarthrocarpus_Contig9963.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9963 2040..3656 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9963.1.1

>prot_D-mesarthrocarpus_Contig9963.1.1 ID=prot_D-mesarthrocarpus_Contig9963.1.1|Name=mRNA_D-mesarthrocarpus_Contig9963.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=293bp
RHCLHLHHRGQREHMGALVPSNLLTGSGFLSDRDSYLLFHPSDSRVPHML
IARRDCPTHFLEVTPNPKKPVFYEGMDGCFFLGGGEEGGGWGEPTPAGSS
GVAYTNSIFIARLKPTWSEYSKLPWGEAVRCLGEAGEIRTETDALLAQHQ
VNHGEFPRGVLHSLRQQQQQRKGWPRGATGRHHCSGGDEKEEESRHDPGA
NVRGSGWKIPEAEVARRRDLRGTRVFTIDPSTAKDLDDALHVTPLEDGTV
EVGVHIADVSHFFQPGSELDKEAQRRGTTVYLVQQVGQLAIR*
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mRNA from alignment at D-mesarthrocarpus_Contig9963:2040..3656+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9963.1.1 ID=mRNA_D-mesarthrocarpus_Contig9963.1.1|Name=mRNA_D-mesarthrocarpus_Contig9963.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1617bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9963:2040..3656+ (Discosporangium mesarthrocarpum MT17_79)
CGCCACTGCCTCCATCTCCACCACCGTGGACAGAGAGAGCACATGGGTGC CCTGGTCCCCTCCAACCTGTTGACAGGCTCAGGTTTCCTATCCGACAGGG ATTCATATCTGCTGTTTCATCCCTCAGACAGCCGGGTGCCCCACATGCTC ATCGCTCGGCGAGATTGCCCCACCCACTTCCTGGAGGTGAGGCCGCCCCC CACCCTTTAAGATATGTCCCCACCGATAACTCTGACCCTAACCCTATAAA CCACAAGCCACGCTGTGTTGCACTGCTTCTTGGAGGTTAAGCTTGAGGTC ACGCCTTGGCCCTGGAAACCCTAACCCTAGCCCTAGACCAACCACATACA GAACAGTTCTCGGAAAGTACGTGCGTCCAAGTCCAGGCCCTGCTACTGTA TGTTCGAGACCCTTGCCCTAACCCTGTCCTTTGTTGGGTGGCCACCCACT TAGGTAACCCCTAACCCTAAAAAACCTGTGTTCTATGAAGGGATGGACGG TTGCTTTTTTTTGGGGGGGGGAGAGGAGGGGGGGGGGTGGGGTGAGCCAA CGCCTGCCGGAAGCAGTGGTGTGTGTATGTGTGTGCGTGTCAACACAATG TTAATTTGTGTGTGTTAACACAACATTAATGCGTGTGGGTCTTGACTCTT TGTCGGTTTTTTGTTTTGCCATCCCTAGTTGTTAAGAGAAAAAATGTTGC TGTTATCACGGGGGAGACGACAGATCTCGCCCCTCCAAGGGGAAAAGGAG AGCTAGTTGATGAAGTGGGGTTAGGTTTAGGGCTCATACACTTCAGATAC CAGGTAACCCCCCGTCTCCTCCCCCGCCCCTCCCCCCAATGCCTCTTGCA TTCTTTGTTGACTGGCGTGGGCTGTGCAACGGCCCTGCTCTCCCTGGTTG TGGTAAATAAATGAACAAACATGCACAAAATGAAACCGCTCCAAATATGT ATATACACACGTGTATATACAGTGCCCAAGGGCGTACACCAACTCCATCT TCATTGCCCGGCTGAAGCCCACCTGGTCTGAGTACTCCAAGTTGCCCTGG GGCGAGGCCGTCAGGTGCCTAGGGGAGGCTGGGGAGATACGGACTGAGAC TGATGCCCTCCTGGCCCAGCACCAAGTCAATCACGGGGAGTTCCCAAGAG GGGTCCTGCATTCTCTGAGGCAGTACCTACCAGGGGGGGGGGGCGTCCCA GGGCAGCAGCAACAGCAGAAGAAGCAGATGCGGAGACAGCAGCAGCAGCG AAAGGGGTGGCCCAGGGGCGCCACGGGCCGCCACCACTGCAGCGGCGGCG ATGAGAAAGAGGAGGAGAGCCGGCACGATCCAGGGGCAAATGTGAGGGGC TCTGGGTGGAAGATCCCGGAGGCGGAGGTGGCGCGGCGGAGGGACCTCCG GGGCACCCGAGTCTTCACGATTGACCCTTCCACAGCCAAGGACCTCGATG ATGCCCTCCATGTGACCCCGCTGGAGGACGGCACGGTGGAGGTGGGGGTT CACATCGCGGATGTCAGCCACTTCTTCCAGCCTGGCTCGGAGCTGGACAA GGAGGCCCAGCGGCGGGGAACCACAGTGTACCTGGTGCAGCAGGTGGGTC AATTGGCGATACGTTAA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9963:2040..3656+

>mRNA_D-mesarthrocarpus_Contig9963.1.1 ID=mRNA_D-mesarthrocarpus_Contig9963.1.1|Name=mRNA_D-mesarthrocarpus_Contig9963.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=879bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9963:2040..3656+ (Discosporangium mesarthrocarpum MT17_79)
CGCCACTGCCTCCATCTCCACCACCGTGGACAGAGAGAGCACATGGGTGC
CCTGGTCCCCTCCAACCTGTTGACAGGCTCAGGTTTCCTATCCGACAGGG
ATTCATATCTGCTGTTTCATCCCTCAGACAGCCGGGTGCCCCACATGCTC
ATCGCTCGGCGAGATTGCCCCACCCACTTCCTGGAGGTAACCCCTAACCC
TAAAAAACCTGTGTTCTATGAAGGGATGGACGGTTGCTTTTTTTTGGGGG
GGGGAGAGGAGGGGGGGGGGTGGGGTGAGCCAACGCCTGCCGGAAGCAGT
GGTGTGGCGTACACCAACTCCATCTTCATTGCCCGGCTGAAGCCCACCTG
GTCTGAGTACTCCAAGTTGCCCTGGGGCGAGGCCGTCAGGTGCCTAGGGG
AGGCTGGGGAGATACGGACTGAGACTGATGCCCTCCTGGCCCAGCACCAA
GTCAATCACGGGGAGTTCCCAAGAGGGGTCCTGCATTCTCTGAGGCAACA
GCAGCAGCAGCGAAAGGGGTGGCCCAGGGGCGCCACGGGCCGCCACCACT
GCAGCGGCGGCGATGAGAAAGAGGAGGAGAGCCGGCACGATCCAGGGGCA
AATGTGAGGGGCTCTGGGTGGAAGATCCCGGAGGCGGAGGTGGCGCGGCG
GAGGGACCTCCGGGGCACCCGAGTCTTCACGATTGACCCTTCCACAGCCA
AGGACCTCGATGATGCCCTCCATGTGACCCCGCTGGAGGACGGCACGGTG
GAGGTGGGGGTTCACATCGCGGATGTCAGCCACTTCTTCCAGCCTGGCTC
GGAGCTGGACAAGGAGGCCCAGCGGCGGGGAACCACAGTGTACCTGGTGC
AGCAGGTGGGTCAATTGGCGATACGTTAA
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