prot_D-mesarthrocarpus_Contig995.3.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig995.3.1
Unique Nameprot_D-mesarthrocarpus_Contig995.3.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length411
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig995.3.1 vs. uniprot
Match: D7G8A9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A9_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 8.280e-77
Identity = 166/367 (45.23%), Postives = 206/367 (56.13%), Query Frame = 0
Query:   40 RHLSVDFICAFMDSGDPSVHSQMLAGARGGGILSLPLRGALWRDPPNTALLYVETLSQGLLLNRRVSRKSKVEFFTLSNIEQLRKVFDSAPAPLYKALQDLLRSLLCDPATSPFLTAQSLPRSSTASSAGFNQAGRQLPEVGRDLVVIHYPRVLLKGLACLGGHEDLGQRQLVLEVLTICPCLFPGYLRTFSSAALEPKPTYRCLQTYSFLSRLLRDVPLPPRNKLEDSSGSIKAVAGTTNSMGSPLVTEGKEDDEGDAWAGRGVVPRGGEGSRAWGSPEGLLGAIMPLGLGKKELTKGVLSSNSLLQASTMTLIADILDRGAQVIALEGYGLPNRSTFLT---LLRQRLPEVQTLLGLRDRLGTGS 403
            RHLSVD +CAFMDS DP++  QM+ GARGGG L L  RG LWRDP  T  + VETL + LL NRRVSR++K +FF+   IE LRKVFD A   LY++L  L+ ++LCD  TSPFL A        A++AG                V+ + R LL GLACLG HEDLGQR L+L  L  CP L   YLRTF++A LE +PTYR LQTYS LS +LR VP+                       GS               AG                 + L   +MP  L KKELT+GVLS + LLQA+TM L+A ILDR + V A      P+    +    LLRQR+P++QTLLGLRD++G G+
Sbjct:  375 RHLSVDLLCAFMDSEDPALQMQMVTGARGGGALGLIFRGCLWRDPEETCTVVVETLHRRLLRNRRVSRRAKADFFSSGTIEHLRKVFDHASPALYESLHGLMSAVLCDTTTSPFLEA--------AAAAG-------------GTAVVTFQRPLLAGLACLGAHEDLGQRTLLLPTLVACPSLLGPYLRTFNTAMLEARPTYRLLQTYSLLSTVLRKVPV----------------------AGSXXXXXXXXXXXXXXXAG-----------------QALFSTVMPAELNKKELTRGVLSGSPLLQAATMNLMAGILDRSSLVAAAAAGSSPSPPGVVDMKRLLRQRMPDLQTLLGLRDKIGVGA 681          
BLAST of mRNA_D-mesarthrocarpus_Contig995.3.1 vs. uniprot
Match: A0A6H5K182_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K182_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 4.710e-71
Identity = 169/410 (41.22%), Postives = 213/410 (51.95%), Query Frame = 0
Query:   40 RHLSVDFICAFMDSGDPSVHSQMLAGARGGGILSLPLRGALWRDPPNTALLYVETLSQGLLLNRRVSRKSKVEFFTLSNIEQLRKV------------------------FDSAPAPLYKALQDLLRSLLCDPATSPFLTAQSLPRSSTASSAGFNQAGRQLPEVGRDLVVIHYPRVLLKGLACLGGHEDLGQRQLVL---------------EVLTICPCLFPGYLRTFSSAALEPKPTYRCLQTYSFLSRLLRDVPLPPRNKLEDSSGSIKAVAGTTNSMGSPLVTEGKEDDEGDAWAGRGVVPRGGEGSRAWGSPEGLLGAIMPLGLGKKELTKGVLSSNSLLQASTMTLIADILDRGAQVIALEGYGLPNRSTFLT---LLRQRLPEVQTLLGLRDRLGTGSQTGA 407
            RHLSVD +CAFMDS DP++  QM+ G RGGG L L  RG LWRDP  T  + VETL + LL NRRVSR++K +FF+   IE LRKV                        FD A   LY++L  L+ ++LCD  TSPFL A        A++AG                V+ + R LL GLACLG HEDLGQR L+L                 L  CP L   YLRTF++A LE +PTYR LQTYS LS +LR VP                VAG+     SPL  E                           + + L   +MP  L KKELT+GVLS ++LLQA+TM L+A ILDR + V+A      P+    +    LLRQR+P++QTLLGLRD++G G+  G+
Sbjct:  319 RHLSVDLLCAFMDSEDPALQMQMVTGTRGGGALGLIFRGCLWRDPEETCTIVVETLHRRLLRNRRVSRRAKADFFSSGTIEHLRKVGSFLLPAQELFFFADQSFDFVTAVFDHASPALYESLHGLMSAVLCDTTTSPFLEA--------AATAG-------------GTAVVTFQRPLLAGLACLGAHEDLGQRALLLVGRCLLLEASSKWYRSTLVACPSLLGPYLRTFNTAILEARPTYRLLQTYSLLSAVLRKVP----------------VAGS-----SPLSEEXXXXXX------------------XXXAGQALFSTVMPAELNKKELTRGVLSGSTLLQAATMNLMASILDRASLVVAAAAGSSPSPPGVVEMKRLLRQRMPDLQTLLGLRDKIGVGAGDGS 668          
BLAST of mRNA_D-mesarthrocarpus_Contig995.3.1 vs. uniprot
Match: A0A4D9D7A6_9STRA (Npa1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7A6_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 8.700e-7
Identity = 96/375 (25.60%), Postives = 152/375 (40.53%), Query Frame = 0
Query:   40 RHLSVDFICAFMDSGDPSVHSQMLAGARGGGILSLPLRGALWRDPPNTALLYVETLSQGLLLNRRVSRKSKVEFFTLSNIEQLRKVF-----DSAPAPLYKALQDLLRSLLCDPATSPFLTAQSLPRSSTASSAGFNQAGRQLPEVGRDLVVIHYPRVLLKGLACLGGHEDLGQRQLVLEVLTICPCLFPGYLRTFSSAALEPKPTYRCLQTYSFLSRLLRDVPLPPRNKLEDSSGSIKAVAGTTNSMGSPLVTEGKEDDEGDAWAGRGVVPRGGEGSRAWGSPEGLLGAIMPLGLGKKELTKGVLSSNSLLQASTMTLIADILDR-GAQVIALEGYGLPNR----------STFLTLLRQRLPEVQTLLGLRDR 398
            R ++V F  A + S D  + +++L+  R   IL    + +L +D P T  +++ +L   L  + +V  K K    T+S +E+LRKV      +   A + + L+ ++R                             + G Q    GR  V +   R+LL     L G  DL Q+++ L+ L   P +   ++R F+   LE +PT   L  Y+F++R+LR                              L TEG          GR       EG    G+ E +LG+++P GLGK+ELTK +LS + LLQ   + L   +L              LP            S     L  RLP++Q +L +R R
Sbjct:  365 RPVAVAFASALLRSRDSGLGTRLLSTDR---ILKAIFK-SLPQDEPRTLEIWLASLWCALC-HPQVPGKVKKRLVTVSRLEELRKVLSGRGREDRRAGVVRLLEIMVRGR----------------------EGQGREGGGQARTGGRAGVAV--VRLLLS----LAGSADLYQQEVALKFLANYPEVREPFIRRFNPP-LEARPTVSGLAAYTFVARVLRTC----------------------------LGTEGXXXXXXXXXXGRW------EGGGDVGA-ERVLGSLLPAGLGKRELTKALLSPHPLLQRLGLLLCVHVLRSVSPNASTPRSPSLPTHHPLQQPLSSPSALRIALLHRLPDLQVILAIRAR 670          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig995.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G8A9_ECTSI8.280e-7745.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K182_9PHAE4.710e-7141.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9D7A6_9STRA8.700e-725.60Npa1 domain-containing protein n=1 Tax=Nannochloro... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021714Nucleolar pre-ribosomal-associated protein 1, N-terminalPFAMPF11707Npa1coord: 23..242
e-value: 2.7E-21
score: 76.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
IPR039844Nucleolar pre-ribosomal-associated protein 1PANTHERPTHR13500NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1coord: 24..399

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig995contigD-mesarthrocarpus_Contig995:6539..10053 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig995.3.1mRNA_D-mesarthrocarpus_Contig995.3.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig995 6538..10053 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig995.3.1 ID=prot_D-mesarthrocarpus_Contig995.3.1|Name=mRNA_D-mesarthrocarpus_Contig995.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=411bp
GVEVGGGSSRGGAVGQGRKAKRKQAAGERGADAESERIVRHLSVDFICAF
MDSGDPSVHSQMLAGARGGGILSLPLRGALWRDPPNTALLYVETLSQGLL
LNRRVSRKSKVEFFTLSNIEQLRKVFDSAPAPLYKALQDLLRSLLCDPAT
SPFLTAQSLPRSSTASSAGFNQAGRQLPEVGRDLVVIHYPRVLLKGLACL
GGHEDLGQRQLVLEVLTICPCLFPGYLRTFSSAALEPKPTYRCLQTYSFL
SRLLRDVPLPPRNKLEDSSGSIKAVAGTTNSMGSPLVTEGKEDDEGDAWA
GRGVVPRGGEGSRAWGSPEGLLGAIMPLGLGKKELTKGVLSSNSLLQAST
MTLIADILDRGAQVIALEGYGLPNRSTFLTLLRQRLPEVQTLLGLRDRLG
TGSQTGAGLGA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021714Npa1_N
IPR039844URB1