mRNA_D-mesarthrocarpus_Contig9882.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9882.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9882.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9882.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9882contigD-mesarthrocarpus_Contig9882:1757..3787 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size842
Hectar predicted targeting categorysignal anchor
Exons2
Cds size774
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791139.0147555-CDS-D-mesarthrocarpus_Contig9882:1756..18351680791139.0147555-CDS-D-mesarthrocarpus_Contig9882:1756..1835Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9882 1757..1835 -
1680791139.0300915-CDS-D-mesarthrocarpus_Contig9882:3025..37201680791139.0300915-CDS-D-mesarthrocarpus_Contig9882:3025..3720Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9882 3026..3720 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791139.0417562-UTR-D-mesarthrocarpus_Contig9882:3720..37871680791139.0417562-UTR-D-mesarthrocarpus_Contig9882:3720..3787Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9882 3721..3787 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9882.1.1prot_D-mesarthrocarpus_Contig9882.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9882 1757..3720 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9882.1.1

>prot_D-mesarthrocarpus_Contig9882.1.1 ID=prot_D-mesarthrocarpus_Contig9882.1.1|Name=mRNA_D-mesarthrocarpus_Contig9882.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=258bp
MSRIDLLRPRRKLRTEKGRQGWLRCFTMQGYLIAGTTAVVLWGSLWTVPT
STPQSPGTSEGGSPGAELQGGIKPLPLHLRTGNIDHSAADPHPGARQQEI
LDPSQQYSRGQVSLRQRSGGEAQDGIQARVQGHGDEGIGNGGTPSSNGRP
LSREEEESMLQTEYGKWRKASSLWDQGGGGNRTTTFGGVKSGSTGASESR
GVGKRKCKPLRWALQAYSEEDLARCYEELRTRYEFGEPLRQVEVITIVPG
AGTGSGSP
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mRNA from alignment at D-mesarthrocarpus_Contig9882:1757..3787-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9882.1.1 ID=mRNA_D-mesarthrocarpus_Contig9882.1.1|Name=mRNA_D-mesarthrocarpus_Contig9882.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2031bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9882:1757..3787- (Discosporangium mesarthrocarpum MT17_79)
TATTTATTGAAAACCGGTAAGGGTTTATTTGCTCAGAATGCAAAAATCCT
CGTTTTAAAAGCTGAAGATGTCGAGGATTGACCTTCTACGGCCTCGAAGG
AAACTGCGCACAGAGAAGGGTCGACAGGGGTGGTTACGATGCTTCACCAT
GCAAGGATACCTTATCGCGGGGACGACCGCCGTGGTGTTGTGGGGTAGCC
TTTGGACTGTTCCAACGTCGACGCCACAGTCCCCTGGAACTTCAGAGGGT
GGGTCACCGGGTGCGGAACTGCAAGGGGGGATAAAACCGCTACCCCTGCA
CTTGCGAACTGGAAACATCGATCACTCTGCTGCAGACCCGCATCCCGGAG
CACGGCAACAGGAAATCCTCGATCCCAGCCAGCAATATTCGCGGGGACAG
GTATCTTTGAGACAACGCAGTGGAGGTGAGGCGCAGGATGGAATTCAAGC
TAGGGTGCAGGGGCACGGGGACGAAGGGATTGGAAATGGAGGGACCCCGT
CTTCGAATGGGAGACCTCTTTCACGAGAAGAGGAGGAGAGCATGCTGCAG
ACGGAGTATGGAAAATGGAGGAAGGCGTCGAGCCTTTGGGACCAGGGAGG
AGGGGGGAATCGGACGACGACTTTCGGCGGTGTCAAGTCGGGCAGCACAG
GGGCGAGTGAAAGCAGAGGCGTCGGGAAGCGAAAATGCAAACCGTTGCGG
TGGGCATTGCAGGCGTACTCCGAGGAGGACTTAGCGAGATGCTACGAGGA
ATTGCGTACAAGGTAACACAAAATACTACGTTCGTCTTTATTTGGCTGGT
TGACGGGAAAGGCGCTGTGCCATCAATTGCTGTTGCTTTGGCGTCCTGAT
ACAACATGAAGTGCTCGTTGTTCATCGTGCCTCTGCGGGCACGCCCTAGG
CCTTTTCATCTTTCCCGACCCCCACTTTATTGCCGTGTGCTGTCTTTGTA
ATTCAACCCTCTAGAGCTCTGCTGGGTGCGCGACCTCGGAAGTCTCACGA
ATTGTAGCTCTACAAGACAAAAAAAAGCTCCGTGTATCATTCAGGGGCCC
GACTTATTTCGAACTGTCGTGGGGCAGCAAAATATGCTAGCATAATCCCC
ATGGTCGCATACCGTAGAAGAACAATGTGCTGTGAGAGGCTTGTTTCCCC
CCCCCTTCAAAATCTATATTTCTACGCCTCCATATCCTTATGTGTACCTT
GTGCGTGAAAATGTCGGTTTGTCATTTCCTGTTGGTTTGTTGCCTAGAGA
AGGAGCAATTGCAACTGCAAGCATGTCTAGGTTCTAGCCATTGCGGAAGG
AGCAGGTGATAGCTATATCCACATCCCAGCCAATTCAGAGAGAGAGAGTT
GGCGGCTACATCGTCGTGTGCCCATTCTGAGAGTGCTCCTCTGGCTTGTA
AGCTTACTACTTTGGAAGAACCCAAATGGGGCTTGGTGTATCCTTTTATC
TCTTTCTTGTCCCTCTTGAGACTCAAATAGGTCGGTCAAACTTGTGTAGT
TCTCTGTCTTCCTTGGAGCAATTAAGTCAGCTGTTGTTATCTTTTCTTTT
CTTATCTTATCTTTTCTTTTCTTTTCTTTGTTTCTTTTCGTTCTGTCCTT
TTTTTTCACAGATTTATCTTTTCCTTTTTTCCTTCCCAGCTTGGTCTCTC
GTCTACGACTCCAGCAACACACTAACATCTTCGCCTTTTTTTTTTTTTCT
AATGATGTCACTTTCGATCTCTATTAGGAGCATCACGGATAAAGGGTTGG
CATGGTACACTTGGCCCCGACTTTGGACACTTCATGCCCACCCGGACTGT
GATCCAAAAAGTTAAAAAATAAAAAGTTAAAAAATAAAAAGTTAAAAATA
AAAGTCCCTCTTGTCTACCTCGTTGCCTCATGTAACTTGCCAAACCCGCT
GGAGTTCTTTGTGAGCACCCTGAAGCAGCCTTACCCCTTCCCCATGCACC
AGGTACGAGTTTGGAGAGCCGCTCAGGCAGGTGGAAGTGATCACCATTGT
GCCAGGCGCAGGGACGGGGAGCGGGTCGCCG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9882:1757..3787-

>mRNA_D-mesarthrocarpus_Contig9882.1.1 ID=mRNA_D-mesarthrocarpus_Contig9882.1.1|Name=mRNA_D-mesarthrocarpus_Contig9882.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=774bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9882:1757..3787- (Discosporangium mesarthrocarpum MT17_79)
ATGTCGAGGATTGACCTTCTACGGCCTCGAAGGAAACTGCGCACAGAGAA
GGGTCGACAGGGGTGGTTACGATGCTTCACCATGCAAGGATACCTTATCG
CGGGGACGACCGCCGTGGTGTTGTGGGGTAGCCTTTGGACTGTTCCAACG
TCGACGCCACAGTCCCCTGGAACTTCAGAGGGTGGGTCACCGGGTGCGGA
ACTGCAAGGGGGGATAAAACCGCTACCCCTGCACTTGCGAACTGGAAACA
TCGATCACTCTGCTGCAGACCCGCATCCCGGAGCACGGCAACAGGAAATC
CTCGATCCCAGCCAGCAATATTCGCGGGGACAGGTATCTTTGAGACAACG
CAGTGGAGGTGAGGCGCAGGATGGAATTCAAGCTAGGGTGCAGGGGCACG
GGGACGAAGGGATTGGAAATGGAGGGACCCCGTCTTCGAATGGGAGACCT
CTTTCACGAGAAGAGGAGGAGAGCATGCTGCAGACGGAGTATGGAAAATG
GAGGAAGGCGTCGAGCCTTTGGGACCAGGGAGGAGGGGGGAATCGGACGA
CGACTTTCGGCGGTGTCAAGTCGGGCAGCACAGGGGCGAGTGAAAGCAGA
GGCGTCGGGAAGCGAAAATGCAAACCGTTGCGGTGGGCATTGCAGGCGTA
CTCCGAGGAGGACTTAGCGAGATGCTACGAGGAATTGCGTACAAGGTACG
AGTTTGGAGAGCCGCTCAGGCAGGTGGAAGTGATCACCATTGTGCCAGGC
GCAGGGACGGGGAGCGGGTCGCCG
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