prot_D-mesarthrocarpus_Contig983.5.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig983.5.1
Unique Nameprot_D-mesarthrocarpus_Contig983.5.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length133
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5KEU9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU9_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 9.460e-29
Identity = 55/121 (45.45%), Postives = 77/121 (63.64%), Query Frame = 0
Query:    1 MVHLDAEQAFIQADIDTEVCFKLPQGCEELSHTVVRLNRALYGLKQASRRWNDRFTQVLLGLGFDQSKADPCLFRYVNNYDVDLLVTVHVDDMIVVGTREDSDAVSKALSFEFPTKNLGPV 121
            + H D +QAF++A    +   +LP+GC  LS  +V+LN++LYGL+QASR W     + LL LGF+Q  AD C+FR V   +V LL+ VHVDD++ VGT+E  D   K L    P K+LG +
Sbjct:  210 LCHFDIDQAFVRAPFKEDTFMRLPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCVFRSVEGGEVVLLLVVHVDDIVAVGTKERCDQFGKDLGEYVPVKSLGEL 330          
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5K7J2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7J2_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.490e-28
Identity = 50/122 (40.98%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    3 HLDAEQAFIQADIDTEVCFKLPQGCEELSHTVVRLNRALYGLKQASRRWNDRFTQVLLGLGFDQSKADPCLFRYVNNYDVDLLVTVHVDDMIVVGTREDSDAVSKALSFEFPTKNLGPVCLL 124
            H D +QA+  A +D EV  +LP GC + SH VV   RA+YGLKQ+ R+W       ++  GF+Q KADPC+FR + +  V +++ ++VDD +V G+ ED + +  +L+ +FPTKN G + ++
Sbjct:   14 HWDEKQAYTHATLDEEVFLRLPAGCGDKSHKVVMAERAIYGLKQSGRQWGYHAADTVVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDTLVAGSDEDCEELLASLNKKFPTKNSGRMRMV 135          
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5JIY9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIY9_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 3.690e-28
Identity = 53/121 (43.80%), Postives = 78/121 (64.46%), Query Frame = 0
Query:    1 MVHLDAEQAFIQADIDTEVCFKLPQGCEELSHTVVRLNRALYGLKQASRRWNDRFTQVLLGLGFDQSKADPCLFRYVNNYDVDLLVTVHVDDMIVVGTREDSDAVSKALSFEFPTKNLGPV 121
            + H D EQAF++++++ +V  +LPQGC  LS   V+L + LYGL+QASR+W+    + L+ LGF+Q  AD C+FR++ +  V L++ VHVDD+  VG RE  D     L    P KNLG +
Sbjct:   13 LCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMTVKLGKILYGLRQASRQWHAMLKRCLVELGFEQCMADACVFRFIEDGCVVLILIVHVDDIFAVGEREKCDKFGADLIKSVPVKNLGEL 133          
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5K2J9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J9_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 5.290e-28
Identity = 49/117 (41.88%), Postives = 77/117 (65.81%), Query Frame = 0
Query:    3 HLDAEQAFIQADIDTEVCFKLPQGCEELSHTVVRLNRALYGLKQASRRWNDRFTQVLLGLGFDQSKADPCLFRYVNNYDVDLLVTVHVDDMIVVGTREDSDAVSKALSFEFPTKNLG 119
            H D +QA+  A +D EV  KLP GC + SH + +  R++YGLKQ+ R+W       L+  GF+Q KADPC+FR + +  V +++ ++VDD++V G+ ED + +  +L+ +FPTK LG
Sbjct:   14 HWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERSIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKILG 130          
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5JZE6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE6_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 1.600e-27
Identity = 51/117 (43.59%), Postives = 76/117 (64.96%), Query Frame = 0
Query:    3 HLDAEQAFIQADIDTEVCFKLPQGCEELSHTVVRLNRALYGLKQASRRWNDRFTQVLLGLGFDQSKADPCLFRYVNNYDVDLLVTVHVDDMIVVGTREDSDAVSKALSFEFPTKNLG 119
            H D +QA+  A +D EV  KLP GC + SH + +  RA+YGLKQ+ R+W       L+  GF+Q KADPC+FR + +  V +++ ++VDD++V G  ED + +  +L+  FPTKNLG
Sbjct:  225 HWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMTDEVVVMIIVIYVDDILVDGFDEDCEELLASLNKRFPTKNLG 341          
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5JSK5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSK5_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 2.060e-27
Identity = 52/117 (44.44%), Postives = 78/117 (66.67%), Query Frame = 0
Query:    3 HLDAEQAFIQADIDTEVCFKLPQGCEELSHTVVRLNRALYGLKQASRRWNDRFTQVLLGLGFDQSKADPCLFRYVNNYDVDLLVTVHVDDMIVVGTREDSDAVSKALSFEFPTKNLG 119
            H D +QA+  A +D EV  +LP GC + SH +V+  RA+YGLKQ+ R+W       L+  GF+Q KADPC+F  + N  V L++ ++VDD++V G+ ED + +  +L+ +FPTKNLG
Sbjct:  443 HWDVKQAYTHATLDEEVLLRLPAGCGDKSHKIVKAERAIYGLKQSGRQWGYHVADTLVENGFEQCKADPCVFCKMVNEVVVLIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLG 559          
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5JUB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUB8_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 2.070e-27
Identity = 51/117 (43.59%), Postives = 78/117 (66.67%), Query Frame = 0
Query:    3 HLDAEQAFIQADIDTEVCFKLPQGCEELSHTVVRLNRALYGLKQASRRWNDRFTQVLLGLGFDQSKADPCLFRYVNNYDVDLLVTVHVDDMIVVGTREDSDAVSKALSFEFPTKNLG 119
            H D +QA+  A +D EV  KLP GC + SH + +  RA+YGLKQ+ R+W       L+  GF+Q KADPC+FR + +  V +++ ++VDD++V G+ ED + +  +L+ +FPTKNLG
Sbjct:  356 HWDVKQAYTHATLDEEVFLKLPAGCGDKSHMITKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLG 472          
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5JUF5_9PHAE (C3H1-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUF5_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 2.070e-27
Identity = 52/117 (44.44%), Postives = 78/117 (66.67%), Query Frame = 0
Query:    3 HLDAEQAFIQADIDTEVCFKLPQGCEELSHTVVRLNRALYGLKQASRRWNDRFTQVLLGLGFDQSKADPCLFRYVNNYDVDLLVTVHVDDMIVVGTREDSDAVSKALSFEFPTKNLG 119
            H D +QA+  A +D EV  +LP GC + SH +V+  RA+YGLKQ+ R+W       L+  GF+Q KADPC+FR + N  V ++  ++VDD++V G+ ED + +  +L+ +FPTKNLG
Sbjct:  188 HWDVKQAYTHATLDEEVLLRLPAGCGDKSHKIVKAERAIYGLKQSGRQWGYHVADTLVENGFEQCKADPCVFRKMVNKVVVMISMIYVDDILVAGSDEDREELLASLNNKFPTKNLG 304          
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 2.920e-27
Identity = 51/117 (43.59%), Postives = 78/117 (66.67%), Query Frame = 0
Query:    3 HLDAEQAFIQADIDTEVCFKLPQGCEELSHTVVRLNRALYGLKQASRRWNDRFTQVLLGLGFDQSKADPCLFRYVNNYDVDLLVTVHVDDMIVVGTREDSDAVSKALSFEFPTKNLG 119
            H D +QA+  A +D EV  KLP GC + SH + +  RA+YGLKQ+ R+W       L+  GF+Q KADPC+FR + +  V +++ ++VDD++V G+ ED + +  +L+ +FPTKNLG
Sbjct: 1246 HWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLG 1362          
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 3.800e-27
Identity = 51/117 (43.59%), Postives = 78/117 (66.67%), Query Frame = 0
Query:    3 HLDAEQAFIQADIDTEVCFKLPQGCEELSHTVVRLNRALYGLKQASRRWNDRFTQVLLGLGFDQSKADPCLFRYVNNYDVDLLVTVHVDDMIVVGTREDSDAVSKALSFEFPTKNLG 119
            H D +QA+  A +D EV  KLP GC + SH + +  RA+YGLKQ+ R+W       L+  GF+Q KADPC+FR + +  V +++ ++VDD++V G+ ED + +  +L+ +FPTKNLG
Sbjct:  438 HWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLG 554          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEU9_9PHAE9.460e-2945.45Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K7J2_9PHAE1.490e-2840.98Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JIY9_9PHAE3.690e-2843.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K2J9_9PHAE5.290e-2841.88Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZE6_9PHAE1.600e-2743.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JSK5_9PHAE2.060e-2744.44Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JUB8_9PHAE2.070e-2743.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JUF5_9PHAE2.070e-2744.44C3H1-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JN00_9PHAE2.920e-2743.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQN6_9PHAE3.800e-2743.59Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..121
e-value: 7.0E-22
score: 78.2
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 3..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig983contigD-mesarthrocarpus_Contig983:12910..13308 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig983.5.1mRNA_D-mesarthrocarpus_Contig983.5.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig983 12113..13635 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig983.5.1 ID=prot_D-mesarthrocarpus_Contig983.5.1|Name=mRNA_D-mesarthrocarpus_Contig983.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=133bp
MVHLDAEQAFIQADIDTEVCFKLPQGCEELSHTVVRLNRALYGLKQASRR
WNDRFTQVLLGLGFDQSKADPCLFRYVNNYDVDLLVTVHVDDMIVVGTRE
DSDAVSKALSFEFPTKNLGPVCLLGTGREDNC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2