mRNA_D-mesarthrocarpus_Contig983.5.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 206 bits (523), Expect = 3.800e-56 Identity = 124/278 (44.60%), Postives = 171/278 (61.51%), Query Frame = 3
Query: 687 CVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQGRGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQGTVACS--EADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGICVYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKALEKKSFFRHKKLSMN 1514
C RD E G L ISQTA+I + R DV S+S PA+P + P+++ G RE IG+++W + +R DIS +VR++AR++ +E HWK V+ L L + + GI YE+G GL LA + D+S+A D DRR VSG A G ++ S+TQ V+ S EA+Y+A GE VKEA FVR +L F+ P+ I V EDN+GA+ L +NPL++ R+K DVR+HFIR L +S DISI +S Q AD+LTKAL K S H++ MN
Sbjct: 234 CAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYA-DAEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETS-GSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIK---FVSTSEQHADMLTKALSKSSLQYHRRKLMN 506
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE) HSP 1 Score: 199 bits (506), Expect = 4.410e-56 Identity = 117/282 (41.49%), Postives = 163/282 (57.80%), Query Frame = 3
Query: 684 ACVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQG--RGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQG--TVACSEADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGICVYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKALEKKSFFRHKKLSMNL 1517
AC + RD ERG L ISQ F +L + P + L E FREL+G+++W A TR DI+N+VR++ARY HWK A+ L + + GI +E+G G+ + F D+ +A DRR VSGG V+ G V WFSRTQ T++ +EA+Y+A+ +V+KE F+R + FM P G+P I V+EDN+GAI +A NP+ +K DVRHHFIR+LV+ K+ISI ++ Q AD LTKA+ K+SF H+ MNL
Sbjct: 43 ACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMP-CIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISIT---NVPTPFQHADFLTKAISKESFALHRDFVMNL 320
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 203 bits (516), Expect = 5.690e-56 Identity = 120/281 (42.70%), Postives = 165/281 (58.72%), Query Frame = 3
Query: 687 CVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQG--RGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQG--TVACSEADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGICVYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKALEKKSFFRHKKLSMNL 1517
C + R+ E G+L ISQ F +L V P + L A FREL+G+++W A TR DI+N+VR++ARY HW A+ L + GI +++G G L +AD+ FA ADRR VSGG V G AV+WFSRTQ T++ +EA+Y+A+G+VVKE F+R I FM PQ G+P I V+EDN+GAI LA+NP++ +K DVRHHF+R+LV+ K+IS+ H+ Q AD LTK+L K +F H+ MNL
Sbjct: 185 CFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMP-CIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVI---HVPSPYQRADFLTKSLPKDAFESHRDFVMNL 461
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE) HSP 1 Score: 199 bits (506), Expect = 1.960e-55 Identity = 116/282 (41.13%), Postives = 163/282 (57.80%), Query Frame = 3
Query: 684 ACVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQG--RGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQG--TVACSEADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGICVYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKALEKKSFFRHKKLSMNL 1517
AC + RD ERG L ISQ F +L + P + L E + FREL+G+++W A TR DI+N+VR++ARY HWK A+ L + + GI +E+G G+ + F D+ +A DRR VSGG V+ G V WFSRTQ T++ +EA+Y+A+ +V+KE F+R + FM P +P I V+EDN+GAI + NP+ +K DVRHHFIR+LV+ K+ISI H+ + Q AD LTKA+ K+SF H+ MNL
Sbjct: 98 ACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVKLTDFDENEASADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMP-CIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISIT---HVPTQFQHADFLTKAISKESFALHRDFVMNL 375
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE) HSP 1 Score: 199 bits (507), Expect = 6.570e-55 Identity = 117/282 (41.49%), Postives = 162/282 (57.45%), Query Frame = 3
Query: 684 ACVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQG--RGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQG--TVACSEADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGICVYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKALEKKSFFRHKKLSMNL 1517
AC + RD ERG L ISQ F +L + P + L E FREL+G+++W A TR DI+N+VR++ARY HWK A+ L + + GI +E+G G+ + F D+ +A DRR VSGG V+ G V WFSRTQ T++ +EA+Y+A+ +V+KE F+R + FM P G+P I V+EDN+GAI +A NP+ +K DVRHHFIR+LV+ K+ISI H+ Q AD LTKA+ K+S H+ MNL
Sbjct: 160 ACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMP-CIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISIT---HVPTHFQHADFLTKAISKESLGLHRDFVMNL 437
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5KLT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT9_9PHAE) HSP 1 Score: 195 bits (496), Expect = 9.460e-55 Identity = 115/268 (42.91%), Postives = 159/268 (59.33%), Query Frame = 3
Query: 687 CVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQG--RGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQG--TVACSEADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGIC--VYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKAL 1472
C + R+ E G+L ISQ F +L V P + L A FREL+G+++W A TR DI+N+VR++ARY + HW A+ L + GI +++G GL L +AD+ FA ADRR VSGG V G AV+WFSRTQ T++ +EA+Y+A+G+VVKE F+R I FM PQ G+P C V+EDN+GAI LA+NP++ +K DVRHHF+R+LV+ K+IS+ H+ Q AD LTK+L
Sbjct: 49 CFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPTLVHWNAAMDILGDARRTSHFGISFQRGTVEGLSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMP---CNPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVI---HVPSPYQRADFLTKSL 310
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5K8K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K2_9PHAE) HSP 1 Score: 195 bits (496), Expect = 1.030e-54 Identity = 115/272 (42.28%), Postives = 158/272 (58.09%), Query Frame = 3
Query: 684 ACVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQG--RGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQG--TVACSEADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGICVYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKALEKKSF 1487
AC + RD ERG L ISQ F +L + V P + L E FREL+G+V+W A TR DI+N+VR++ARY HWK A+ L + + GI +E+G G+ + F D+ + ADRR VSGG V+ G V WFSRTQ T++ +EA+Y+A+ +V+KE F+R + FM P G+P I V+EDN+GAI +A NP+ +K D RHH IR LV+ K+ISI H++ E Q AD LTKA+ K+SF
Sbjct: 15 ACFYQRDLERGLLRISQQRFAEELAAQYGVEWGKSVPLPVSVKLTDLDENEACADVPFRELVGSVMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYVRKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMP-CIPVFEDNQGAIQVAHNPITNSNSKHIDERHHLIRKLVERKEISIT---HVTSEFQHADFLTKAISKESF 282
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE) HSP 1 Score: 207 bits (528), Expect = 2.480e-54 Identity = 121/282 (42.91%), Postives = 166/282 (58.87%), Query Frame = 3
Query: 684 ACVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQG--RGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQG--TVACSEADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGICVYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKALEKKSFFRHKKLSMNL 1517
AC + RD ERG L ISQ F +L V P + L E FREL+G+++W A TR DI+N+VR++ARY HWK A+ L + + GI +E+G G+ + F D+ +A ADRR VSGG V+ G V WFSRTQ T++ +EA+Y+A+ +V+KE F+R + FM P G+P I V+EDN+GAI +A NP+ +K DVRHHFIR+LV+ K+ISI H++ E Q AD LTKA+ K+SF H+ MNL
Sbjct: 1194 ACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMP-CIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISIT---HVTSEFQHADFLTKAISKESFALHRDFVMNL 1471
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 206 bits (525), Expect = 5.590e-54 Identity = 127/279 (45.52%), Postives = 174/279 (62.37%), Query Frame = 3
Query: 687 CVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQGRGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQGTVACS--EADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGICVYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKALEKKSFFRHKKLSMNL 1517
C RD E G L ISQTA+I + ER DV S+S PA P A L P++E G RE IG+++W + +R D+S +VR++AR++ ++ HW + L L G+ + GI Y++G GL LA + D+S+A D DRR VSG A G V+ S+TQ V+ S EA+Y+A GE VKEA FVR +L F+ P+ I V EDN+GAI L +NPL++GR K DVR+HFIR L +S DIS+ K+ + E Q AD+LTKAL + S H++ MNL
Sbjct: 971 CAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYA-DTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETS-GSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISV--KFVPTTE-QHADLLTKALSRVSLQYHRRKLMNL 1244
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 206 bits (525), Expect = 6.360e-54 Identity = 127/279 (45.52%), Postives = 174/279 (62.37%), Query Frame = 3
Query: 687 CVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQGRGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQGTVACS--EADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGICVYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKALEKKSFFRHKKLSMNL 1517
C RD E G L ISQTA+I + ER DV S+S PA P A L P++E G RE IG+++W + +R D+S +VR++AR++ ++ HW + L L G+ + GI Y++G GL LA + D+S+A D DRR VSG A G V+ S+TQ V+ S EA+Y+A GE VKEA FVR +L F+ P+ I V EDN+GAI L +NPL++GR K DVR+HFIR L +S DIS+ K+ + E Q AD+LTKAL + S H++ MNL
Sbjct: 1350 CAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYA-DTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETS-GSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISV--KFVPTTE-QHADLLTKALSRVSLQYHRRKLMNL 1623 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig983.5.1 >prot_D-mesarthrocarpus_Contig983.5.1 ID=prot_D-mesarthrocarpus_Contig983.5.1|Name=mRNA_D-mesarthrocarpus_Contig983.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=133bp MVHLDAEQAFIQADIDTEVCFKLPQGCEELSHTVVRLNRALYGLKQASRRback to top mRNA from alignment at D-mesarthrocarpus_Contig983:12113..13635- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig983.5.1 ID=mRNA_D-mesarthrocarpus_Contig983.5.1|Name=mRNA_D-mesarthrocarpus_Contig983.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1523bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig983:12113..13635- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig983:12113..13635- >mRNA_D-mesarthrocarpus_Contig983.5.1 ID=mRNA_D-mesarthrocarpus_Contig983.5.1|Name=mRNA_D-mesarthrocarpus_Contig983.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=399bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig983:12113..13635- (Discosporangium mesarthrocarpum MT17_79)back to top |