mRNA_D-mesarthrocarpus_Contig983.5.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig983.5.1
Unique NamemRNA_D-mesarthrocarpus_Contig983.5.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 3.800e-56
Identity = 124/278 (44.60%), Postives = 171/278 (61.51%), Query Frame = 3
Query:  687 CVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQGRGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQGTVACS--EADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGICVYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKALEKKSFFRHKKLSMN 1514
            C   RD E G L ISQTA+I  +  R DV S+S  PA+P   + P+++    G    RE IG+++W +  +R DIS +VR++AR++   +E HWK  V+ L  L  + + GI YE+G GL LA + D+S+A D  DRR VSG A   G   ++  S+TQ  V+ S  EA+Y+A GE VKEA FVR +L F+ P+      I V EDN+GA+ L +NPL++ R+K  DVR+HFIR L +S DISI     +S   Q AD+LTKAL K S   H++  MN
Sbjct:  234 CAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYA-DAEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETS-GSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIK---FVSTSEQHADMLTKALSKSSLQYHRRKLMN 506          
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 4.410e-56
Identity = 117/282 (41.49%), Postives = 163/282 (57.80%), Query Frame = 3
Query:  684 ACVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQG--RGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQG--TVACSEADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGICVYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKALEKKSFFRHKKLSMNL 1517
            AC + RD ERG L ISQ  F  +L     +      P   +  L    E        FREL+G+++W A  TR DI+N+VR++ARY       HWK A+  L  +  +   GI +E+G   G+ +  F D+ +A    DRR VSGG V+ G   V WFSRTQ   T++ +EA+Y+A+ +V+KE  F+R +  FM P  G+P  I V+EDN+GAI +A NP+    +K  DVRHHFIR+LV+ K+ISI    ++    Q AD LTKA+ K+SF  H+   MNL
Sbjct:   43 ACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMP-CIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISIT---NVPTPFQHADFLTKAISKESFALHRDFVMNL 320          
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 5.690e-56
Identity = 120/281 (42.70%), Postives = 165/281 (58.72%), Query Frame = 3
Query:  687 CVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQG--RGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQG--TVACSEADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGICVYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKALEKKSFFRHKKLSMNL 1517
            C + R+ E G+L ISQ  F  +L     V      P +    L        A    FREL+G+++W A  TR DI+N+VR++ARY       HW  A+  L     +   GI +++G   G  L  +AD+ FA   ADRR VSGG V  G  AV+WFSRTQ   T++ +EA+Y+A+G+VVKE  F+R I  FM PQ G+P  I V+EDN+GAI LA+NP++   +K  DVRHHF+R+LV+ K+IS+    H+    Q AD LTK+L K +F  H+   MNL
Sbjct:  185 CFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMP-CIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVI---HVPSPYQRADFLTKSLPKDAFESHRDFVMNL 461          
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 1.960e-55
Identity = 116/282 (41.13%), Postives = 163/282 (57.80%), Query Frame = 3
Query:  684 ACVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQG--RGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQG--TVACSEADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGICVYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKALEKKSFFRHKKLSMNL 1517
            AC + RD ERG L ISQ  F  +L     +      P   +  L    E   +    FREL+G+++W A  TR DI+N+VR++ARY       HWK A+  L  +  +   GI +E+G   G+ +  F D+ +A    DRR VSGG V+ G   V WFSRTQ   T++ +EA+Y+A+ +V+KE  F+R +  FM P   +P  I V+EDN+GAI +  NP+    +K  DVRHHFIR+LV+ K+ISI    H+  + Q AD LTKA+ K+SF  H+   MNL
Sbjct:   98 ACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVKLTDFDENEASADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMP-CIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISIT---HVPTQFQHADFLTKAISKESFALHRDFVMNL 375          
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 6.570e-55
Identity = 117/282 (41.49%), Postives = 162/282 (57.45%), Query Frame = 3
Query:  684 ACVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQG--RGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQG--TVACSEADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGICVYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKALEKKSFFRHKKLSMNL 1517
            AC + RD ERG L ISQ  F  +L     +      P   +  L    E        FREL+G+++W A  TR DI+N+VR++ARY       HWK A+  L  +  +   GI +E+G   G+ +  F D+ +A    DRR VSGG V+ G   V WFSRTQ   T++ +EA+Y+A+ +V+KE  F+R +  FM P  G+P  I V+EDN+GAI +A NP+    +K  DVRHHFIR+LV+ K+ISI    H+    Q AD LTKA+ K+S   H+   MNL
Sbjct:  160 ACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMP-CIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISIT---HVPTHFQHADFLTKAISKESLGLHRDFVMNL 437          
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5KLT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT9_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 9.460e-55
Identity = 115/268 (42.91%), Postives = 159/268 (59.33%), Query Frame = 3
Query:  687 CVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQG--RGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQG--TVACSEADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGIC--VYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKAL 1472
            C + R+ E G+L ISQ  F  +L     V      P +    L        A    FREL+G+++W A  TR DI+N+VR++ARY    +  HW  A+  L     +   GI +++G   GL L  +AD+ FA   ADRR VSGG V  G  AV+WFSRTQ   T++ +EA+Y+A+G+VVKE  F+R I  FM PQ G+P   C  V+EDN+GAI LA+NP++   +K  DVRHHF+R+LV+ K+IS+    H+    Q AD LTK+L
Sbjct:   49 CFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPTLVHWNAAMDILGDARRTSHFGISFQRGTVEGLSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMP---CNPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVI---HVPSPYQRADFLTKSL 310          
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5K8K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K2_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 1.030e-54
Identity = 115/272 (42.28%), Postives = 158/272 (58.09%), Query Frame = 3
Query:  684 ACVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQG--RGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQG--TVACSEADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGICVYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKALEKKSF 1487
            AC + RD ERG L ISQ  F  +L  +  V      P   +  L    E        FREL+G+V+W A  TR DI+N+VR++ARY       HWK A+  L  +  +   GI +E+G   G+ +  F D+ +    ADRR VSGG V+ G   V WFSRTQ   T++ +EA+Y+A+ +V+KE  F+R +  FM P  G+P  I V+EDN+GAI +A NP+    +K  D RHH IR LV+ K+ISI    H++ E Q AD LTKA+ K+SF
Sbjct:   15 ACFYQRDLERGLLRISQQRFAEELAAQYGVEWGKSVPLPVSVKLTDLDENEACADVPFRELVGSVMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYVRKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMP-CIPVFEDNQGAIQVAHNPITNSNSKHIDERHHLIRKLVERKEISIT---HVTSEFQHADFLTKAISKESF 282          
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 2.480e-54
Identity = 121/282 (42.91%), Postives = 166/282 (58.87%), Query Frame = 3
Query:  684 ACVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQG--RGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQG--TVACSEADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGICVYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKALEKKSFFRHKKLSMNL 1517
            AC + RD ERG L ISQ  F  +L     V      P   +  L    E        FREL+G+++W A  TR DI+N+VR++ARY       HWK A+  L  +  +   GI +E+G   G+ +  F D+ +A   ADRR VSGG V+ G   V WFSRTQ   T++ +EA+Y+A+ +V+KE  F+R +  FM P  G+P  I V+EDN+GAI +A NP+    +K  DVRHHFIR+LV+ K+ISI    H++ E Q AD LTKA+ K+SF  H+   MNL
Sbjct: 1194 ACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMP-CIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISIT---HVTSEFQHADFLTKAISKESFALHRDFVMNL 1471          
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 5.590e-54
Identity = 127/279 (45.52%), Postives = 174/279 (62.37%), Query Frame = 3
Query:  687 CVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQGRGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQGTVACS--EADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGICVYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKALEKKSFFRHKKLSMNL 1517
            C   RD E G L ISQTA+I  + ER DV S+S  PA P A L P++E    G    RE IG+++W +  +R D+S +VR++AR++   ++ HW    + L  L G+ + GI Y++G GL LA + D+S+A D  DRR VSG A   G   V+  S+TQ  V+ S  EA+Y+A GE VKEA FVR +L F+ P+      I V EDN+GAI L +NPL++GR K  DVR+HFIR L +S DIS+  K+  + E Q AD+LTKAL + S   H++  MNL
Sbjct:  971 CAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYA-DTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETS-GSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISV--KFVPTTE-QHADLLTKALSRVSLQYHRRKLMNL 1244          
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 6.360e-54
Identity = 127/279 (45.52%), Postives = 174/279 (62.37%), Query Frame = 3
Query:  687 CVFARDWERGQLLISQTAFIYKLCERVDVCSSSPTPAAPNA*LLPRQEGARAGIGRFRELIGAVLWGANMTRRDISNSVRSLARYSQDLSEEHWKRAVRALQSLHGS*ERGIIYEQGRGLELAAFADSSFAGDRADRRPVSGGAVIFGRAAVAWFSRTQGTVACS--EADYMAMGEVVKEAFFVRNILFFMQPQCGVPEGICVYEDNKGAIDLAKNPLNTGRAKPFDVRHHFIRDLVQSKDISIYTKYHLSRERQAADVLTKALEKKSFFRHKKLSMNL 1517
            C   RD E G L ISQTA+I  + ER DV S+S  PA P A L P++E    G    RE IG+++W +  +R D+S +VR++AR++   ++ HW    + L  L G+ + GI Y++G GL LA + D+S+A D  DRR VSG A   G   V+  S+TQ  V+ S  EA+Y+A GE VKEA FVR +L F+ P+      I V EDN+GAI L +NPL++GR K  DVR+HFIR L +S DIS+  K+  + E Q AD+LTKAL + S   H++  MNL
Sbjct: 1350 CAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYA-DTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETS-GSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISV--KFVPTTE-QHADLLTKALSRVSLQYHRRKLMNL 1623          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig983.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCG0_9PHAE3.800e-5644.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KP70_9PHAE4.410e-5641.49Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFG2_9PHAE5.690e-5642.70Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L4G9_9PHAE1.960e-5541.13Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JEF2_9PHAE6.570e-5541.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KLT9_9PHAE9.460e-5542.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8K2_9PHAE1.030e-5442.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHY5_9PHAE2.480e-5442.91Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5KSG8_9PHAE5.590e-5445.52Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE6.360e-5445.52Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig983contigD-mesarthrocarpus_Contig983:12113..13635 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2711.XP_006485859.1
PFAMsRVT_2,Retrotran_gag_3,rve
Model size1523
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.72e-20
EggNOG OGsCOG0515@1|root,COG2801@1|root,KOG0017@2759|Eukaryota,KOG1187@2759|Eukaryota,37RIF@33090|Viridiplantae,3GFVM@35493|Streptophyta
DescriptionCysteine-rich RLK (RECEPTOR-like protein kinase) 8
Cds size399
COG categoryL
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791134.6345565-UTR-D-mesarthrocarpus_Contig983:12112..129091680791134.6345565-UTR-D-mesarthrocarpus_Contig983:12112..12909Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig983 12113..12909 -
1680791134.6569695-UTR-D-mesarthrocarpus_Contig983:13308..136351680791134.6569695-UTR-D-mesarthrocarpus_Contig983:13308..13635Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig983 13309..13635 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791134.6461992-CDS-D-mesarthrocarpus_Contig983:12909..133081680791134.6461992-CDS-D-mesarthrocarpus_Contig983:12909..13308Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig983 12910..13308 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig983.5.1prot_D-mesarthrocarpus_Contig983.5.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig983 12910..13308 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig983.5.1

>prot_D-mesarthrocarpus_Contig983.5.1 ID=prot_D-mesarthrocarpus_Contig983.5.1|Name=mRNA_D-mesarthrocarpus_Contig983.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=133bp
MVHLDAEQAFIQADIDTEVCFKLPQGCEELSHTVVRLNRALYGLKQASRR
WNDRFTQVLLGLGFDQSKADPCLFRYVNNYDVDLLVTVHVDDMIVVGTRE
DSDAVSKALSFEFPTKNLGPVCLLGTGREDNC*
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mRNA from alignment at D-mesarthrocarpus_Contig983:12113..13635-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig983.5.1 ID=mRNA_D-mesarthrocarpus_Contig983.5.1|Name=mRNA_D-mesarthrocarpus_Contig983.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1523bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig983:12113..13635- (Discosporangium mesarthrocarpum MT17_79)
GCTGAGCCCTTGTTTTTCGAAGAGGCAGTCTCATCTGATTACCGGGATTT CTGGGTGAACGCAATGAGCAAAGAGTTTAAGGGACTAACGAGGGCAGGAG TGTTTACACCTAGGGAACTACCAATTGGACGACAGGCGATTGGGGATAGT TGGGTGTGTAAATGGAAATCTAACGAGCTCGGCTTTGTTACTAGAGCCAA GGCTAGATTAGTGGCGAAGGGGTACAGCCAATAGGAAGGGAAGAATTTCT TCGACACTTAAGCCCCAACCCATTCATCATCCACAATACGTCCTCTGGCA GCATTTGCAAATGAGGTTAACCGAAGGATGGTACACTTGGACGCTGAACA GGCGTTCATCCAAGCTGACATCGATACAGAAGTATGTTTCAAGCTCCCAC AAGGGTGTGAAGAACTATCTCACACGGTAGTCCGTCTCAATCGCGCTTTG TATGGCCTGAAACAAGCCAGTAGGCGTTGGAACGACAGATTCACACAAGT ATTACTTGGGCTGGGTTTTGATCAGAGTAAGGCGGATCCATGTCTTTTCC GGTATGTCAATAACTACGATGTAGACTTGCTCGTTACCGTTCATGTCGAT GATATGATTGTCGTCGGTACGCGCGAGGATTCTGATGCGGTGAGTAAAGC TCTTTCTTTTGAGTTCCCAACCAAAAACCTTGGGCCTGTGTGTTTGCTCG GGACTGGGAGAGAGGACAATTGTTGATCTCACAGACTGCTTTCATCTACA AACTCTGTGAACGTGTAGATGTGTGTTCCTCCAGCCCCACCCCAGCAGCA CCAAATGCATAGCTCTTGCCTCGACAGGAAGGTGCAAGAGCAGGGATCGG GAGGTTCCGGGAACTAATTGGTGCCGTTCTTTGGGGAGCCAATATGACCC GACGTGACATATCAAACAGTGTGAGAAGCTTGGCTAGGTACTCGCAAGAC CTCAGTGAGGAACATTGGAAGAGAGCCGTTCGAGCCCTTCAATCCCTCCA CGGATCTTAGGAACGAGGAATTATTTATGAGCAGGGGAGGGGGCTAGAGT TAGCTGCCTTTGCAGATTCTTCCTTTGCCGGAGACCGAGCAGACAGACGT CCTGTCTCCGGAGGGGCTGTGATTTTTGGGAGGGCTGCAGTAGCTTGGTT TTCAAGGACACAGGGAACTGTAGCATGTAGTGAAGCTGACTACATGGCCA TGGGGGAGGTTGTCAAGGAGGCCTTTTTTGTGCGCAACATTTTGTTTTTC ATGCAACCACAGTGTGGGGTACCTGAGGGGATTTGTGTCTACGAGGACAA CAAGGGGGCAATTGACTTAGCTAAGAACCCCTTGAATACAGGAAGGGCAA AGCCATTTGATGTGCGACATCACTTCATTAGAGACCTAGTGCAGAGTAAG GACATCAGTATATATACGAAGTATCATTTATCCAGAGAGAGACAAGCGGC TGATGTACTGACTAAGGCACTGGAGAAAAAGAGCTTCTTTAGACATAAAA AACTCAGCATGAATTTGCGCCCT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig983:12113..13635-

>mRNA_D-mesarthrocarpus_Contig983.5.1 ID=mRNA_D-mesarthrocarpus_Contig983.5.1|Name=mRNA_D-mesarthrocarpus_Contig983.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=399bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig983:12113..13635- (Discosporangium mesarthrocarpum MT17_79)
ATGGTACACTTGGACGCTGAACAGGCGTTCATCCAAGCTGACATCGATAC
AGAAGTATGTTTCAAGCTCCCACAAGGGTGTGAAGAACTATCTCACACGG
TAGTCCGTCTCAATCGCGCTTTGTATGGCCTGAAACAAGCCAGTAGGCGT
TGGAACGACAGATTCACACAAGTATTACTTGGGCTGGGTTTTGATCAGAG
TAAGGCGGATCCATGTCTTTTCCGGTATGTCAATAACTACGATGTAGACT
TGCTCGTTACCGTTCATGTCGATGATATGATTGTCGTCGGTACGCGCGAG
GATTCTGATGCGGTGAGTAAAGCTCTTTCTTTTGAGTTCCCAACCAAAAA
CCTTGGGCCTGTGTGTTTGCTCGGGACTGGGAGAGAGGACAATTGTTGA
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