prot_D-mesarthrocarpus_Contig983.2.2 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig983.2.2
Unique Nameprot_D-mesarthrocarpus_Contig983.2.2
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length357
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig983.2.2 vs. uniprot
Match: D7FS80_ECTSI (B1358B12.18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS80_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 4.730e-33
Identity = 134/212 (63.21%), Postives = 160/212 (75.47%), Query Frame = 0 
Query:  142 KNSLMEQMLKTAGQRQHWQEAIDLFDKMKAEGMSLDKLAYVAALRACSKGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKVSLYTAVMNACYTVGDLDGILAVADRLRDQRLKPDHSTYHLMVTSHIGRLDWVSATKALVDMSKDGLVPSKRSARQWRLASAALEEVDLDVDE----RDGEKAGTR 349
            K  LM QM+K AGQRQHW+EAI LFD+M+ +G+   K AY AALR       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               VGD+D ILA+ ++LR Q L PDH+ YHL+VTSHI +LDWVSAT+ALV+M + GL P+  SAR+WRLA+A +EE+D++V+E    R+GE+A  R
Sbjct:   89 KKRLMAQMVKAAGQRQHWKEAIVLFDQMQEKGVPTVKAAYGAALRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGDMDAILAIGEQLRAQSLTPDHAGYHLIVTSHISKLDWVSATEALVEMGEAGLAPTAGSARKWRLANAVIEEIDIEVNEDYMPREGEEADDR 300
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig983.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FS80_ECTSI4.730e-3363.21B1358B12.18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 149..177
e-value: 0.0017
score: 16.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 212..246
score: 9.492543
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 142..352
e-value: 3.9E-36
score: 127.0
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 144..296
e-value: 2.7E-13
score: 49.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..356
IPR044657Pentatricopeptide repeat-containing protein NFD5-likePANTHERPTHR46862OS07G0661900 PROTEINcoord: 150..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig983contigD-mesarthrocarpus_Contig983:2557..6162 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig983.2.2mRNA_D-mesarthrocarpus_Contig983.2.2Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig983 2255..6304 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig983.2.2 ID=prot_D-mesarthrocarpus_Contig983.2.2|Name=mRNA_D-mesarthrocarpus_Contig983.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=357bp
MASNVISTWVVGFVALSTTCSAFAPVAPYSTCPPGERWWSTDGTLYKESS
VPRPRPSSESRRVRPDRRMAGCRAAATALMTVTGHGCLGVDHYRARIWRR
CRRPRSGQGWGQAPVQATKGGAGGGSASGREVEVSFLKGVGKNSLMEQML
KTAGQRQHWQEAIDLFDKMKAEGMSLDKLAYVAALRACSKGAAWERAIQL
FDNCIEEGYDLDEVMVTSAVKACCQAGRPVEAEALLAKGVARGVQPKVSL
YTAVMNACYTVGDLDGILAVADRLRDQRLKPDHSTYHLMVTSHIGRLDWV
SATKALVDMSKDGLVPSKRSARQWRLASAALEEVDLDVDERDGEKAGTRE
DEDRNV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
IPR033443PPR_long
IPR044657NFD5-like