mRNA_D-mesarthrocarpus_Contig9827.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9827.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig9827.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9827.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9827contigD-mesarthrocarpus_Contig9827:991..3671 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LK48
PFAMsPkinase,SET
Model size616
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K00924,ko:K06101,ko:K11423,ko:K16675
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,ko04391,map00310,map04391
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.47e-21
EggNOG OGsCOG2940@1|root,KOG0594@1|root,KOG0594@2759|Eukaryota,KOG1083@2759|Eukaryota
EC2.1.1.43,2.3.1.225
Descriptionuterine gland development
Cds size615
COG categoryH
BRITEko00000,ko00001,ko01000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791134.1451764-CDS-D-mesarthrocarpus_Contig9827:990..11041680791134.1451764-CDS-D-mesarthrocarpus_Contig9827:990..1104Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9827 991..1104 +
1680791134.1603365-CDS-D-mesarthrocarpus_Contig9827:2007..21631680791134.1603365-CDS-D-mesarthrocarpus_Contig9827:2007..2163Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9827 2008..2163 +
1680791134.176288-CDS-D-mesarthrocarpus_Contig9827:2997..31811680791134.176288-CDS-D-mesarthrocarpus_Contig9827:2997..3181Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9827 2998..3181 +
1680791134.1890476-CDS-D-mesarthrocarpus_Contig9827:3510..36711680791134.1890476-CDS-D-mesarthrocarpus_Contig9827:3510..3671Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9827 3511..3671 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9827.2.1prot_D-mesarthrocarpus_Contig9827.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9827 991..3671 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9827.2.1

>prot_D-mesarthrocarpus_Contig9827.2.1 ID=prot_D-mesarthrocarpus_Contig9827.2.1|Name=mRNA_D-mesarthrocarpus_Contig9827.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=205bp
IGVGLGQVCPPPPLAGVPCPREFGAPPPTVESFAVSCKDASILLEGGGEI
LASLEGRRGVKIDILPQGDPRAPPSAPEHRVIRVTGGQEQVRAALEAMRA
LASVQPLEAWLEAQKQKLNHQEALNALHVAARELTAVTQASRPRQRWCLG
SDWHSFSPQLIALAMRNKRNADLRRNALQVTRKIAEAGKPPSPPVLLLHA
VRNA*
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mRNA from alignment at D-mesarthrocarpus_Contig9827:991..3671+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9827.2.1 ID=mRNA_D-mesarthrocarpus_Contig9827.2.1|Name=mRNA_D-mesarthrocarpus_Contig9827.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2681bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9827:991..3671+ (Discosporangium mesarthrocarpum MT17_79)
ATAGGGGTGGGGCTGGGACAGGTGTGCCCACCCCCCCCACTAGCTGGTGT
TCCCTGCCCTCGAGAGTTTGGGGCACCCCCCCCTACTGTGGAGAGCTTTG
CTGTCAGCTGCAAGGTGCAGATTGGGAATTTTTGTTAGAGATGGTTCTGT
GTGGGTGTCGGTCGAGGGGGGAGGTCGAGGGGGGGGGAGGCTGAGGGGGG
GGGAGGTTGAGGGGAGAAAGTCGAGGGGGGAGGTTGAGGAGGGAGGTCGA
GGAGGGGAGGTTGAGGGAAGAAAGTCGAGGGGGGGAATGTTGAGGGGGGG
AGGTGGGTGGGCACTAGATGTGAGGCTTGTGACCCCAGGGTGGGGAAGTG
AACTTTTCAGTTGGCTCTAGACGCTCTGTGGATGGGTGGAGAATGGGTTG
AGCTGGGAGTGGATGGATGGGGATGGGGTCAAAGTTCAGGAGCAGGAGAG
GAATCATATCAAGAACTGAAAGGCTTGTGAAGGGAATTGTGCCTGTCATC
AAATTGAACTCAGCTGATGAGCTCTGTACCTTTGGTATGGATGGGGAGCA
ACAAGAGAGGTAGCTCCATGGGCGATCCCCCCCCCGTCCATGGCACAACG
GGCTACCCGTGTTTTTAATCATTGTAGAGGATTCCCAGGTAATGGCCAGT
GACCCGTGGGCTACATTGTTTTTTGATGGTGAATCAGTGTGATGTTCACA
AAACACCTTGACAGCGAAGGCAGTAGATGTAACGTGGCCGTTTCTCTTCT
CTCCCTTAGTCTTCTGACAATTGTTTGGTGACTGGTGACCCCCCCTCTGT
GTTGGACTGATGCATAGTTCACCCTTAACCCTAGAGCTCTGTCCTCAATC
CCTCTCCCGCTCATTCCCTCTGCGTCCCCATCTATTATACCCTCCTTGGT
CCCCTTCCCAAGCCTGATTCTTCTTCCCCCCCGCCCTCGATCCTCGTGCC
TCCCCACCCTCCCTGGCTATTAACCCATAACCCTAAAATGTAACCCCAAT
ATGGGTGCCACACATAGGACGCTTCCATTCTTCTGGAGGGTGGAGGAGAA
ATTCTTGCCTCTTTGGAGGGCCGTAGAGGGGTCAAGATTGATATCTTGCC
ACAGGGTGACCCTAGAGCACCCCCCTCAGCCCCAGAGCACAGGGTGATTC
GAGTCACAGGAGGGCAGGAGCAGGTGTGTACATGGAGTATGAATTCACCA
TAAGTGGATTAGGTGTGTGCATGGTTGTAGTGAGCCCTAACCCTAACCCT
ACCCGTTGTGAGGAAGTGGAAGACACATGAGCAGCATTGGAAGGAGGGAG
GGGTACGTGTGGTTTTTCTTGTCTTTTCATAGCTTAGCAGTGTGGGTTGG
TGAGTACAGGAGTAGCACGGGGTTGTTTTTTTTGGATGTTCATTGTCATC
AGTTTCAGCTATTTTTACCTTTGCAGAGATGTAGAGTCCTACTGTAGAGC
GGCAGTGCTATTTTTGTGCTTTGCATTTTTCAGTTTGCAGTAACCTTTTC
CAGTTTCATGCTCTTGGTGCTGCTCTTTTATCTTTGCAGCACTTTCGTTG
GATCTCCAGAAATTTCTCTCCTGCTTGCTCCCCTGCACTCCACACCTTCA
CCACCACCGCTCTCGGAATAAGTCAAGGAGACAAAAGGACGTAGCCCATT
GGTCCATCAATCTATATATCCCTAGACCCCTAGATCCCTAGATCTATTTT
TGTGCTTGCCCTTGTACCTGTGCTTTGTTAAACGATCGATTTCTGTCCTG
CACTGAATAATGGTTTGATCGAGAGTATGCATCACCTTGCGGCAACGCAT
ACTCCCCTACGTCACATGTACTCTCTTGAGGCACAGCCCAGCACACATCA
GAGGTTGCTTAGAGCTCCAACACAATGGGGTTAGGGTTAGGGCATGAGCA
CCTATATAACCGCTGTTCGTCGTTCATGTGTTACTTGGTACCAGGTACGG
ATTGAATGCTCCCATAAAGCCACACATTGGATTGTTCTGAAATAAAACCC
TGTGCAGGTGCGAGCAGCGCTGGAGGCCATGCGCGCCCTCGCCTCTGTTC
AGCCCCTGGAAGCGTGGCTCGAGGCGCAGAAGCAGAAGCTCAACCACCAG
GAAGCCTTGAATGCGTTGCATGTCGCAGCGAGGGAACTTACGGCTGTTAC
CCAGGCCTCAAGACCCAGGCAGCGTTGGTGCTTGGGCAGCGGTGAGTAAC
TGTGTTTGCGTGAGGCTGAGGGCACCACCCGTTCTTGGTCTTCCGTGCCG
TGTTTTTAAGGCTTGGAAGGCGTACTCTTGCCCTGGTCTACAGGTCTTCT
GTGCCGTGTTTTGCATAGGCTTGGAAGGCGTACTCTTGCCCTGGTCTACA
GGTCTTCCGTGCCGTGTTTTGCATAGGCTTGGAAGGCGTACTCTTGCCCT
GGTCTACAGCGAAGGGCTTTGAAGTACTCATCTCTGAGAGTCCCGGAGAC
AACCCCACACCCCCCCAAGAGCTCCAACCCTAACCTTGATGTTAGCCCTC
CCCTATTTCCCTTCCTGCAGACTGGCACAGCTTCTCGCCGCAGTTGATAG
CTTTGGCCATGAGGAACAAGCGCAATGCAGACCTCAGGAGGAATGCCCTC
CAGGTCACCAGAAAGATTGCGGAGGCAGGCAAGCCCCCCTCCCCCCCGGT
GCTCCTCCTCCACGCGGTGAGAAATGCCTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9827:991..3671+

>mRNA_D-mesarthrocarpus_Contig9827.2.1 ID=mRNA_D-mesarthrocarpus_Contig9827.2.1|Name=mRNA_D-mesarthrocarpus_Contig9827.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=615bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9827:991..3671+ (Discosporangium mesarthrocarpum MT17_79)
ATAGGGGTGGGGCTGGGACAGGTGTGCCCACCCCCCCCACTAGCTGGTGT
TCCCTGCCCTCGAGAGTTTGGGGCACCCCCCCCTACTGTGGAGAGCTTTG
CTGTCAGCTGCAAGGACGCTTCCATTCTTCTGGAGGGTGGAGGAGAAATT
CTTGCCTCTTTGGAGGGCCGTAGAGGGGTCAAGATTGATATCTTGCCACA
GGGTGACCCTAGAGCACCCCCCTCAGCCCCAGAGCACAGGGTGATTCGAG
TCACAGGAGGGCAGGAGCAGGTGCGAGCAGCGCTGGAGGCCATGCGCGCC
CTCGCCTCTGTTCAGCCCCTGGAAGCGTGGCTCGAGGCGCAGAAGCAGAA
GCTCAACCACCAGGAAGCCTTGAATGCGTTGCATGTCGCAGCGAGGGAAC
TTACGGCTGTTACCCAGGCCTCAAGACCCAGGCAGCGTTGGTGCTTGGGC
AGCGACTGGCACAGCTTCTCGCCGCAGTTGATAGCTTTGGCCATGAGGAA
CAAGCGCAATGCAGACCTCAGGAGGAATGCCCTCCAGGTCACCAGAAAGA
TTGCGGAGGCAGGCAAGCCCCCCTCCCCCCCGGTGCTCCTCCTCCACGCG
GTGAGAAATGCCTGA
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