mRNA_D-mesarthrocarpus_Contig9807.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9807.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9807.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9807.1.1 vs. uniprot
Match: D7FME4_ECTSI (5\'-3\' exoribonuclease 1 (Exonuclease 2) (Exonuclease II) (Exo II) (P140) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME4_ECTSI)

HSP 1 Score: 343 bits (879), Expect = 4.690e-111
Identity = 161/259 (62.16%), Postives = 197/259 (76.06%), Query Frame = 1
Query:    4 KQASYLTGRGVPGSAGVDIGKIQLMLRVTPLQGMRIDTKTGARRKVFGIEEADVPVHMALWSCPAPDPRFEERDKLTLGTRFPIGCRVICLHGGQGHGCLGDVVGHNRQNTKARSMLYRPPEPPFGQAIVQTVKAVYYPSVHICTKLGIPSHVFGKVVGSISVDPGRYDLGLNFKQNGKYQLLGYSKCVLKKERVWSYADTVKIAGSSQEDEEPEVAEWQYSEEAVKLVVQYRHKFPQLFHSLARRSGERFYEAQVHLG 780
            +Q +Y+TGRGVPGS GVDIGK+QLML+  PLQGMR+D  TGARRKVFG EEA+VPVHM LWSCP+ DPRF ER+ +TL  RFP+G RV CLHGG GHGC G+VV H++      + L RPPEPPFG AIVQ+VK  Y+P    C  LGI   VFG++VGS+SVDPGR DL LN KQNG+YQLLGYS+CVL+ E  WS +DTV++ GS+   E+ E   W++S EA+KL+ +Y   FPQLFH LAR  GERF+EA++ LG
Sbjct:  222 EQGAYITGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSCPSEDPRFVERENVTLEERFPLGSRVTCLHGGNGHGCGGEVVAHSKGKVDVLADL-RPPEPPFGLAIVQSVKTAYFPQHKACQTLGISPQVFGRIVGSVSVDPGRVDLALNLKQNGRYQLLGYSRCVLRNEPAWSTSDTVRVVGSAPVTEDMEARSWEFSLEAIKLITRYARAFPQLFHGLARHGGERFFEAEMLLG 479          
BLAST of mRNA_D-mesarthrocarpus_Contig9807.1.1 vs. uniprot
Match: A0A6H5KVU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU6_9PHAE)

HSP 1 Score: 347 bits (891), Expect = 9.610e-110
Identity = 163/259 (62.93%), Postives = 199/259 (76.83%), Query Frame = 1
Query:    4 KQASYLTGRGVPGSAGVDIGKIQLMLRVTPLQGMRIDTKTGARRKVFGIEEADVPVHMALWSCPAPDPRFEERDKLTLGTRFPIGCRVICLHGGQGHGCLGDVVGHNRQNTKARSMLYRPPEPPFGQAIVQTVKAVYYPSVHICTKLGIPSHVFGKVVGSISVDPGRYDLGLNFKQNGKYQLLGYSKCVLKKERVWSYADTVKIAGSSQEDEEPEVAEWQYSEEAVKLVVQYRHKFPQLFHSLARRSGERFYEAQVHLG 780
            +Q +Y+TGRGVPGS GVDIGK+QLML+  PLQGMR+D  TGARRKVFG EEA+VPVHM LWSCP+ DPRF ER+K+TL  RFP+G RV CLHGG GHGC+G+VV HN +      +  RPPEPPFG AIVQ+VK  Y+P    C  LGI   VFG++VGS+SVDPGR DLGLN KQNG+YQLLGYS+CVL+ E  WS +DTV++ GS+   E+ E   W++S EA+KL+ +Y   FPQLFH LAR  GERF+EA++ LG
Sbjct:   90 EQGAYITGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSCPSEDPRFVEREKVTLEERFPLGSRVTCLHGGNGHGCVGEVVAHNGKVDVLADL--RPPEPPFGLAIVQSVKTAYFPQHKACQTLGISPQVFGRIVGSVSVDPGRVDLGLNLKQNGRYQLLGYSRCVLRNEPAWSTSDTVRVVGSAPVTEDMEARSWEFSLEAIKLITRYARAFPQLFHGLARHRGERFFEAEMLLG 346          
BLAST of mRNA_D-mesarthrocarpus_Contig9807.1.1 vs. uniprot
Match: A0A835Z4G8_9STRA (XRN 5'-3' exonuclease N-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4G8_9STRA)

HSP 1 Score: 244 bits (624), Expect = 7.390e-71
Identity = 129/260 (49.62%), Postives = 161/260 (61.92%), Query Frame = 1
Query:   13 SYLTGRGVPGSAGVDIGKIQLMLRVTPLQGMRIDTKTGARRKVFGIEEADVPVHMALWSCPAPDPRFEERDKLTLGTRFPIGCRVICLHGG----QGHGCLGDVVGHNRQNTKARSMLYRPPEPPFGQAIVQTVKAVYYPSVHICTKLGIPSHVFGKVVGSISVDPGRYDLGLNFKQNGKYQLLGYSKCVLKKERVWSYADTVKIAGSSQEDEEPEVAEWQYSEEAVKLVVQYRHKFPQLFHSLARRSGERFYEAQVHLG 780
            +YL GR  PGS GVD+G I   L V PLQG      T     +FG EEADVP+HMALW  PAPDPRFEER   +L  R P+G RV+CL       Q  GC+G V             L RPPEPPFG A+   V+  YYP+  +C +L I   VFGKVVG+++ DPGRYD+GLN K NG+YQLLGYS+CVL+++  WS ADTV+I GS+ ED   EV  W+++E A +LV  Y  ++PQ+F +L      R YEA    G
Sbjct:  722 AYLKGRATPGSGGVDVGPIGSRLTVRPLQGTSCRDVTAY---MFGSEEADVPLHMALWQSPAPDPRFEERGAPSLDVRLPVGSRVLCLTAAGAERQARGCVGRVKALTNGKVDVVVDL-RPPEPPFGAAVAAAVQDRYYPAHAVCQRLRIRPDVFGKVVGTVNADPGRYDIGLNLKANGRYQLLGYSRCVLREQAAWSTADTVRIVGSAGEDAAEEVGAWEFTEAAARLVALYMTRYPQMFAALHTLEHGRSYEAGALFG 977          
BLAST of mRNA_D-mesarthrocarpus_Contig9807.1.1 vs. uniprot
Match: A0A6V1PVC7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PVC7_HETAK)

HSP 1 Score: 237 bits (604), Expect = 1.040e-67
Identity = 123/258 (47.67%), Postives = 166/258 (64.34%), Query Frame = 1
Query:   16 YLTGRGVPGSAGVDIGKIQLMLRVTPLQGMRIDTKTGARRKVFGIEEADVPVHMALWSCPAPDPRFEERDKLTLGTRFPIGCRVICLHGGQGHGCLGDVVGHN-RQNTKARSMLYRPPEPPFGQAIVQTVKAVYYPSVHICTKLGIPSHVFGKVVGSISVDPGRYDLGLNFKQNGKYQLLGYSKCVLKKERVWSYADTVKIAGSSQED--EEPEVAEWQYSEEAVKLVVQYRHKFPQLFHSLARRSGERFYEAQVHLG 780
            YL GRGVPG+ G D+G + L L V PLQGMR D  TG   KV+G +EA VP  +AL + PAPDPRF E++   L  R P+G RV+ + G    G  G V GH+  QNT    +  R PEPPFG  I ++++  Y P+  +   LG+   VFGKVVGS+ ++PGR ++GLN K NG++QLLGYS+C+LK+   W   D VKI G+++ED  EE    +WQ+S +A +L+V Y+  FPQ+FH+LAR    R Y A+  LG
Sbjct:  647 YLGGRGVPGTGGADVGPVALQLAVRPLQGMRQDPLTGRTHKVWGTQEAQVPYQLALRAHPAPDPRFREKEGPPLPERVPVGARVVFVRGAF-RGLSGQVEGHDVEQNTCRVVVEERDPEPPFGLNIARSIQEQYVPAPQLARALGLRGDVFGKVVGSVRIEPGRIEVGLNLKWNGQFQLLGYSRCLLKRRAAWKEGDAVKIVGTAEEDGGEEDLRGDWQFSRKAGELLVDYQRNFPQVFHALARAGHARHYSAEQLLG 903          
BLAST of mRNA_D-mesarthrocarpus_Contig9807.1.1 vs. uniprot
Match: A0A7S2UEG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UEG0_9STRA)

HSP 1 Score: 205 bits (522), Expect = 6.970e-60
Identity = 115/272 (42.28%), Postives = 153/272 (56.25%), Query Frame = 1
Query:    1 MKQASYLTGRGVPGSAGVDIGKIQLMLRVTPLQGMRIDTKTGARRKVFGIEEADVPVHMALWSCPAPDPRFEERDKLTLGTRFPIGCRVICLHGGQGHGCLGDVVGHNRQNTKARSMLYRPPEPPFGQAIVQTVKAVYYPSVHICTKLGIPSHVFGKVVGSISVDPGRYDLGLNFKQNGKYQLLGYSKCVLKKER--------VWSYADTVKIAGS--------SQEDEEPEVAEWQYSEEAVKLVVQYRHKFPQLFHSLARRSGERFYEAQ 768
            M +  YL G G+PGS GV+IG IQ+   + PLQGM+     G+ +KVFG EEADVP+ M L + PAPDPRF E+   T   RFP    VI L  G+  GC+G VVG    +  + ++   PPEPPFG AI ++V+  Y  S      L I   +FGK+ GS+  DPGRYDLGLN K      +LGY++   K            W   D+V + GS        S +D+  E   W+Y+ +AV+LV  YR  FPQLF ++ +   ERFYEA+
Sbjct:   25 MMKTQYLNGSGIPGSGGVNIGDIQIRFTLVPLQGMKTSPVDGSSKKVFGKEEADVPLQMVLMTAPAPDPRFYEKGAQTTAERFPPTTNVI-LTKGKHRGCVGTVVGAADSDKVSVTVAVVPPEPPFGLAIARSVQESYISSSDAAKVLNIHPGIFGKITGSLHFDPGRYDLGLNLKYKHDLSVLGYTRRRNKPASGNNSNVAGAWVMGDSVLVVGSKRSTHGNSSSDDDNKEKIYWEYTPKAVRLVAAYRQTFPQLFSAITKYPNERFYEAK 295          
BLAST of mRNA_D-mesarthrocarpus_Contig9807.1.1 vs. uniprot
Match: A0A7S0BVY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVY8_9STRA)

HSP 1 Score: 207 bits (527), Expect = 2.370e-59
Identity = 116/271 (42.80%), Postives = 163/271 (60.15%), Query Frame = 1
Query:    7 QASYLTGRGVPGSAGVDIGKIQLMLRVTPLQGMRIDTKTGARRKVFGIEEADVPVHMALWSCPAPDPRFEERDKLTLGTRFPIGCRVICLHGGQGHGCLGDVVGHNRQNTKAR---SMLYRPPEPPFGQAIVQTVKAVYYPSVHICTKLGIPSHVFGKVVGSISVDPGRYDLGLNFKQNGKYQLLGYSK---------CVLKKERVWSYADTVKIAGSS----QEDEEPEVAEWQYSEEAVKLVVQYRHKFPQLFHSLARRSGER-FYEAQ 768
            +  Y  G G+PGS GV IG+ Q+ LRV PLQGM+     G+ +K+FG EEADVP+ MALWS PAPDPRF ER  +TL   +P+GC VI L  G+  GC+G VVG + +  + +   ++   PPEPPFG AI ++VK  Y  S      L +   VFGK+ GS+SVDPGRYDLGLN K      + GY++            KK   W   D++K+ GSS     + ++ +   W+Y+ +A++LV  YR +FP LF +++R +  + FY A+
Sbjct:   46 EQQYAMGNGIPGSGGVRIGEAQIRLRVVPLQGMKTFAD-GSTKKIFGKEEADVPLQMALWSAPAPDPRFVERGPMTLSDLYPVGCNVI-LTKGKHKGCIGTVVGVSGEKDEKKVVTNVRIIPPEPPFGLAIARSVKESYVSSHDAAKVLHLDPSVFGKITGSLSVDPGRYDLGLNLKYKEGLCVSGYTRKKNFVEKNVADSKKVNPWLVGDSLKVVGSSVSKGDDTKKKDRTIWEYTPQAIRLVAAYRQQFPSLFSAISRDTTNKGFYNAK 314          
BLAST of mRNA_D-mesarthrocarpus_Contig9807.1.1 vs. uniprot
Match: A0A7S4RC29_9STRA (5'-3' exoribonuclease 1 n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RC29_9STRA)

HSP 1 Score: 201 bits (510), Expect = 4.310e-55
Identity = 114/271 (42.07%), Postives = 156/271 (57.56%), Query Frame = 1
Query:   16 YLTGRGVPGSAGVDIGKIQLMLRVTPLQGMRIDTKTGARRKVFGIEEADVPVHMALWSCPAPDPRFEERDKLTLGTRFPIGCRVICLHGGQGHGCLGDVVGHNRQNTKARSMLYRPPEPPFGQAIVQTVKAVYYPSVHICTKLGIPSHVFGKVVGSISVDPGRYDLGLNFKQNGKYQLLGYSKCVL-----KKER-----VWSYADTVKIAGS---SQEDEEP---EVAEWQYSEEAVKLVVQYRHKFPQLFHSLARRSGERFYEAQVHLG 780
            Y  G  +PGS GV+IG IQ+  +V PLQGM+ + + G+ +K+FG EEAD+P+ MALW  PAPDPRF ER  +T+  RFP  C +I L  G+  GC+G V+G          +   PPEPPFG AI ++V+  Y  +      L +P  +F ++ GS+  DPGRYDLGLN        +LGY++        K E+     VW   D+V + GS   S  D E    E   ++Y+ +AV+LV  YR KFPQLF +L +   ERFYEA+   G
Sbjct:  786 YANGARIPGSGGVNIGDIQIRFKVVPLQGMKTNPQDGSSKKLFGKEEADIPLQMALWEAPAPDPRFIERGPMTIKDRFPPKCNII-LTKGKYRGCMGSVIGVVDGEKLGVKVKVVPPEPPFGLAIARSVQESYISTADAANVLKMPPGIFSRITGSVFFDPGRYDLGLNLTYKTDLCVLGYTRRKKGNRYGKNEKKQANNVWKTGDSVLVVGSRANSSSDGEKGGREKIVFEYTPKAVRLVAAYRQKFPQLFAALCKNPRERFYEAKQVFG 1055          
BLAST of mRNA_D-mesarthrocarpus_Contig9807.1.1 vs. uniprot
Match: K0STL9_THAOC (5'-3' exoribonuclease 1 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0STL9_THAOC)

HSP 1 Score: 196 bits (499), Expect = 1.280e-53
Identity = 114/273 (41.76%), Postives = 156/273 (57.14%), Query Frame = 1
Query:   16 YLTGRGVPGSAGVDIGKIQLMLRVTPLQGMRIDTKTGARRKVFGIEEADVPVHMALWSCPAPDPRFEERDKLTLGTRFPIGCRVICLHGGQGHGCLGDVVGHNRQNTKARSMLYRPPEPPFGQAIVQTVKAVYYPSVHICTKLGIPSHVFGKVVGSISVDPGRYDLGLNFKQNGKYQLLGYSKCVL--------KKERVWSYADTVKIAGS-----SQED-----EEPEVAEWQYSEEAVKLVVQYRHKFPQLFHSLARRSGERFYEAQVHLG 780
            YL G G PGS GV IG +Q+ L++ PLQGM+     G+ +K+FG EEAD+P+ MAL S PAPDPRF ER   +L  RFP  C+V+ L  G+  GC+G V+    ++     +   PPEPPFG AI ++V   Y  S      L +   VFG+V G++   PG+YDLGLN K   +  +LGY++           K    WS  DTV + GS     S ED     EE +   W+++ +AV+LV  Y++ FP LF +LAR   ERFY+A+   G
Sbjct:  834 YLAGAGYPGSGGVQIGDVQIRLKILPLQGMKASPLDGSSKKLFGKEEADLPLQMALASSPAPDPRFIERGPKSLKDRFPSKCKVV-LTKGKYRGCIGTVLSTLDKDKVGVKVSVIPPEPPFGLAIARSVGESYISSGDAARVLKMNPKVFGRVTGNLFFSPGKYDLGLNLKYRDRRYVLGYTRIKQDPNEAKKKKTSNAWSAGDTVLVVGSKRMSASDEDFDSAGEEKKRTIWEFTPKAVRLVAAYKNAFPHLFAALARDPDERFYDAKKVFG 1105          
BLAST of mRNA_D-mesarthrocarpus_Contig9807.1.1 vs. uniprot
Match: A0A7S2PS12_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PS12_9STRA)

HSP 1 Score: 192 bits (489), Expect = 2.700e-52
Identity = 109/270 (40.37%), Postives = 158/270 (58.52%), Query Frame = 1
Query:    1 MKQASYLTGRGVPGSAGVDIGKIQLMLRVTPLQGMRIDTKTGARRKVFGIEEADVPVHMALWSCPAPDPRFEERDKLTLGTRFPIGCRVICLHGGQGHGCLGDVVG---HNRQNTKARSMLYRPPEPPFGQAIVQTVKAVYYPSVHICTKLGIPSHVFGKVVGSISVDPGRYDLGLNFKQNGKYQLLGYS-------KCVLKKERVWSYADTVKIAGSSQ----EDEEPEVAEWQYSEEAVKLVVQYRHKFPQLFHSLARRSGERFYEAQ 768
            + Q  YL G GVPGS GVDI ++Q+ L+V  LQGM+     G+ +KVFG  EAD+P+HMALW+ PAPD RF E    +L   FP G  ++ L  G+  GC G V+      + +     +   PPEPPFG AI ++V+  Y  S+     L +   V GK+ GS+ V+PGRYDLGLN K   +  +LGY+       KC  K ++ WS  D++ + GS Q    +DE+     W+Y+ +A++L+  YR  FPQ+F +L++   ER Y+A+
Sbjct:  514 IMQQQYLVGSGVPGSGGVDINEVQIRLKVVVLQGMKTYAD-GSSKKVFGKVEADLPLHMALWASPAPDERFVESGPKSLNELFPKGSNIL-LTKGKHKGCRGSVLSVTEGGKDSCVVAKVHVLPPEPPFGLAIAKSVQDTYVSSIEAAKLLKLNPGVLGKLTGSLLVNPGRYDLGLNLKFKKEMYVLGYTRMKNVNVKCQ-KAKQAWSEGDSLLVVGSRQNMPDQDEQEGKVIWEYTPKAIRLIALYRQTFPQIFSALSKAPHERIYDAK 780          
BLAST of mRNA_D-mesarthrocarpus_Contig9807.1.1 vs. uniprot
Match: B7FQA3_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQA3_PHATC)

HSP 1 Score: 189 bits (479), Expect = 3.410e-52
Identity = 106/270 (39.26%), Postives = 157/270 (58.15%), Query Frame = 1
Query:   16 YLTGRGVPGSAGVDIGKIQLMLRVTPLQGMRIDTKTGARRKVFGIEEADVPVHMALWSCPAPDPRFEERDKLTLGTRFPIGCRVICLHGGQGHGCLGDVVGHNRQNTKARSMLYRPPEPPFGQAIVQTVKAVYYPSVHICTKLGIPSHVFGKVVGSISVDPGRYDLGLNFKQNGKYQLLGYSKCVLKKE-----------RVWSYADTVKIAGSS----QEDEEPEVAEWQYSEEAVKLVVQYRHKFPQLFHSLARRSGERFYEAQVHLG 780
            Y TG GVPGS GV I +I++ L++ PLQGM+ +   G+ +K+FGIEEADVP+ +ALW  PAPDPRF ER  +TL  RFP    V+ L  G+  GC G VVG   + +    +   P E PFG AI ++V+  +  S      L +   +FGKV G +  + GRYDLGLN K +    ++GY++   + +             W   D++ + GSS    +ED E  + +W+Y+ +A++LV  YR +FPQLF ++A++  E+ Y+A    G
Sbjct:  123 YHTGNGVPGSGGVQIDEIKIRLKLLPLQGMKTNPANGSSKKLFGIEEADVPLQLALWQAPAPDPRFVERGPMTLSERFPESSSVV-LTKGKYRGCKGRVVGVADRKSVGVKVEVIPAELPFGLAIARSVRESHISSSDAAKILKMNPGLFGKVTGRLQFEQGRYDLGLNLKSSDGMCVVGYTRKKWEPQSDLGKKGASLNNAWMAGDSLLVVGSSRNQIEEDREDRI-QWEYTPKAIRLVEDYRREFPQLFANIAKKPNEKKYDANKIFG 390          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9807.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FME4_ECTSI4.690e-11162.165\'-3\' exoribonuclease 1 (Exonuclease 2) (Exonucl... [more]
A0A6H5KVU6_9PHAE9.610e-11062.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z4G8_9STRA7.390e-7149.62XRN 5'-3' exonuclease N-terminus-domain-containing... [more]
A0A6V1PVC7_HETAK1.040e-6747.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UEG0_9STRA6.970e-6042.28Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S0BVY8_9STRA2.370e-5942.80Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A7S4RC29_9STRA4.310e-5542.075'-3' exoribonuclease 1 n=3 Tax=Ditylum brightwell... [more]
K0STL9_THAOC1.280e-5341.765'-3' exoribonuclease 1 n=1 Tax=Thalassiosira ocea... [more]
A0A7S2PS12_9STRA2.700e-5240.37Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B7FQA3_PHATC3.410e-5239.26Predicted protein (Fragment) n=2 Tax=Phaeodactylum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9807contigD-mesarthrocarpus_Contig9807:241..4441 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FME4
PFAMsXRN_N
Model size780
Max annot lvl2759|Eukaryota
KEGG koko:K12618
KEGG Pathwayko03008,ko03018,map03008,map03018
Hectar predicted targeting categoryother localisation
Exons7
Evalue7.68e-112
EggNOG OGsCOG5049@1|root,KOG2045@2759|Eukaryota
Description5'-3' exonuclease activity
Cds size780
COG categoryADL
BRITEko00000,ko00001,ko01000,ko03009,ko03016,ko03019,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9807.1.1prot_D-mesarthrocarpus_Contig9807.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9807 241..4441 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791132.5765996-CDS-D-mesarthrocarpus_Contig9807:240..3721680791132.5765996-CDS-D-mesarthrocarpus_Contig9807:240..372Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9807 241..372 -
1680791132.5916321-CDS-D-mesarthrocarpus_Contig9807:727..8121680791132.5916321-CDS-D-mesarthrocarpus_Contig9807:727..812Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9807 728..812 -
1680791132.6047885-CDS-D-mesarthrocarpus_Contig9807:1056..11601680791132.6047885-CDS-D-mesarthrocarpus_Contig9807:1056..1160Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9807 1057..1160 -
1680791132.6157744-CDS-D-mesarthrocarpus_Contig9807:1820..19221680791132.6157744-CDS-D-mesarthrocarpus_Contig9807:1820..1922Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9807 1821..1922 -
1680791132.630876-CDS-D-mesarthrocarpus_Contig9807:2833..29271680791132.630876-CDS-D-mesarthrocarpus_Contig9807:2833..2927Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9807 2834..2927 -
1680791132.6428063-CDS-D-mesarthrocarpus_Contig9807:3313..34381680791132.6428063-CDS-D-mesarthrocarpus_Contig9807:3313..3438Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9807 3314..3438 -
1680791132.6530664-CDS-D-mesarthrocarpus_Contig9807:4303..44411680791132.6530664-CDS-D-mesarthrocarpus_Contig9807:4303..4441Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9807 4304..4441 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9807.1.1

>prot_D-mesarthrocarpus_Contig9807.1.1 ID=prot_D-mesarthrocarpus_Contig9807.1.1|Name=mRNA_D-mesarthrocarpus_Contig9807.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=260bp
MKQASYLTGRGVPGSAGVDIGKIQLMLRVTPLQGMRIDTKTGARRKVFGI
EEADVPVHMALWSCPAPDPRFEERDKLTLGTRFPIGCRVICLHGGQGHGC
LGDVVGHNRQNTKARSMLYRPPEPPFGQAIVQTVKAVYYPSVHICTKLGI
PSHVFGKVVGSISVDPGRYDLGLNFKQNGKYQLLGYSKCVLKKERVWSYA
DTVKIAGSSQEDEEPEVAEWQYSEEAVKLVVQYRHKFPQLFHSLARRSGE
RFYEAQVHLG
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mRNA from alignment at D-mesarthrocarpus_Contig9807:241..4441-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9807.1.1 ID=mRNA_D-mesarthrocarpus_Contig9807.1.1|Name=mRNA_D-mesarthrocarpus_Contig9807.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4201bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9807:241..4441- (Discosporangium mesarthrocarpum MT17_79)
ATGAAACAGGCGTCCTATCTCACCGGTCGGGGAGTTCCAGGCAGCGCAGG CGTGGACATCGGGAAGATCCAGCTGATGCTTCGGGTAACACCCCTTCAGG GGATGAGGATCGACACAAAGACGGGTGCCCGCCGCAAGGTGTGCAAACTC CTGCCTCCGCTTCCCCCCCCCCCCCCCCTCCGGGGGCCCTCTGGTAAAGA GAAATCCATGCAGAGGGCCCTTGTTGGGGATGTGGAGGGTGGAAGAACAA GCCGGAAATTTTTTGGCTCTGCTGTGTTGGGCTGTCTGATGGCCCTCGAA AGGTCTCATCCAATAAGAGGCCGTTGAATGTAAGGCAGGGAGGGAGGCTA CGGTACTTCTGTTTCAGACTCTGGTCCTACACCTTACACCAAATATTGGA TTCAAGGAGAGTGAAAAGAATCTGCTGCACTGTACTTCTGTTCTTCCACG GTGCGCTGCTGTGCTTGGAGGTGTACTCCAACACTGTGTGTACTTTGAAG AGACATATATGTTTGAACCACTTCAAGCTATTCAGGGGGAGGGGGGGAGG TGCTGTGGTTGTTGCAGCCAGTTTGATGAGCACCTCCACCTCTGTGTTTT CATCATGTCAGCACCCTGCACCTCAGAGAACCTTACTGCCACTGGAGTAT TTTCTTTGAAGAGCTCCTATCATTGCCTCTTCAAAGTATTTTTTATGATT ATTGCTTTGCCATGCTATTATTACTTCAGAAGCACCTCAAGACAAAGTAT TTACTGTTCGCATACAGCCCCCAAGAGGGGCAAGGCCCGTTGGCTGCCTC CTCCGTCGGGTTGAGATGCAAACCTTACCCCCCCCCCCCCACCCCACCCC CCCTACATAAGGCACAGAGTAGGCTGCTTGCCAGGCAAGAGAGCTTAGAT ATCATTGCAATAACTCACCAAACCTTTGACAGAAGCAGCAATACCTCAAA GTACTGGTTACGGCCTCATTTTCTTTTCCCCTCCCAATCCACCACACACG TAGGTCTTTGGCATAGAGGAGGCAGACGTCCCAGTGCACATGGCGCTCTG GTCCTGCCCAGCCCCTGACCCTAGGTTCGAGGAGAGAGACAAGCTCACCC TGGGGACCAGGTTCCCCATCGGTTGCCGGTGAGTGACAGAGAGGTTTGCC ACAGGAGTGCTGGCTGGGGGAGGCGCATTTGGCCTGGGCTTGGGAGGGCG ATTTGGGTACTGAAAATGTTGGTTTTTGACTTGGTCAGCCACTTCACCTC TGGCAGTTTCATGCATGGAGGAAACTTCCTGCCAATATCGCTTCCCACCA CTCTCTCCTTGGCCCCCTATCGGAATGCTACTGATGCCTGCTGTAGTACT GTATGCTGTAGCAGTTTGTGGTATTGTATGCGCCTTGCTTCCAACCTGAC GCGTAAGCCCTCCAAGGCACGGCCCCACTCGAGCCCTATCCCCTGTCTCC ACACCAACACCGACATCGATGCCCCAATGCCCCAATCTTCTGCTGGCTTA TTCCATCTTCGCAGGGTGATATGCCTCCATGGGGGCCAGGGACATGGCTG CTTGGGCGATGTGGTGGGCCACAACAGGCAGAACACCAAGGCACGTAGTA TGCTGTATGTAGCTCTGCCTTCGTTTGGGAGGAGGGGGAGGCAGTAGTGA GGAAGGATTGTCCAGTGGGGGAGGACAGGGAAATTATGAGGGGCACGGGT GGTCATACGCCTGACATACATCAAGTGCTCCGGATGAAGTAAAGGCTGTG ACTGCGAGCACGTAGCACCAGAGCCCAACGTAGAAGGCAGAAGAGACCCT TGTGACGTACTGTGACTTAGTTTGTCGGCCTGCCGGGTCAGCCCCTGAAA GGTCTGGTGCAAGGTGTATCCGAAGGTACGAAGACTGCAAGAACAGAAAG TTTTTTTACTGTCTTGGGGGTGGGTTGCAAACAACAGTGCAGCAGGTGCA TTGTACTCAGAATGAGTTTCCCTCTGTCCGGCAAGAGAGCATGTTTTGAC AAAGGTGCGTGCACTTCAATCCGGGCTTCTGTTCGGTGGCTCATAATTCT TGTCTGCCGTCTCGGATATACACTGTGGAGCTAGATATATATATACCCCA TGCCCCAACCTGCCTCAAGTTGCTTCCTAGGACCGCACGCTATGTGAGCG ACGTTTTTTTAACATTTAGGAGAGCCTTTTCCAGCATTTAGAAAAATCTC TCTGGTGGCTTTGTGGAAAGGACTTGACACCTCCCTCCCTTATCACTCAC CTCCCCCCCCAACATCCAGCATGTCACCTGCCACAGCCCTCCCGCACATC CCCCCCACAGTTTAAGAATAATAATGGTTATTTCAGGCACACTGGTAGTA GTATACTTTGAAGTACATTGTACATTGTATATTAGTAAGAGAGAGAGAGA GAGAGAGAGCATTTCGGGACTTACTTGCCTGGCCCTGCCGCTGCCACCCC CTGCTTCTGTTCGACCGCTTGCCCTGTCTACACAAAACACTGTAACAGCT GGCGGTGAGGGTGGATGAGCGGCCACCAGAGCCTCCGTTTGGTCAAGCAA TCGTACAGACAGTCAAGGCTGTCTACTACCCTTCCGTCCACATCTGCACG AAGCTTGGGATACCCTCCCATGTGAGCCTCCGCTCACTCACCCACACACA CACACACACCCTTGCTGCCCTGTCCCAGGGACCCGCCCCGATGCCCTGAC AACCCTGCAGCGGTTCAAACGGTGGAGTAGTTTCTATTTCGGTTCAAACG GTGGCAGAGCAGAAGCAATGGGGCTTTTTTTTTGTTCTTGCTGTGGTGGA CGTATTGCGGGTGTGTTAAGACACCGGCCCAGCGTGCTGCATACGCCACT GTCTGATTGTTGGGACGCCCCCCTTTGGAGGCAGCGCTTTCGTACCGGCA CCTCTGCGGAGCTGCAGCAGTTTTGTTCTTTTGACTTTTCTTGGCGGGTC AATCAATGGTCTATTCTTCTTCCTACTCCGAAGTACGTCCTACTAGGGCG CTAGAGCCTATGTATGTATGTATGTATCTATGTATGTATCTATGTATGTA TCTATGTATGTATCTATGTATCTATGTATGTTTTTTTTTGCCTTCGGAGC TGCTCTCATTTTTCTGCTCTCTTGCTGCACATGGCCCTAGCGCCTTGCGC ACCATCCATGCCTCGAGTCTAGTTGTCAAGCCCTCCCCTTGGGAGGGAAA GGGCCTTAGAAGAAGTCTTCATTATGCTCCGAGGGAGTGTGTTCGGCTTT GCTTTCCCACACACCCACCCACGCACCCCAGGTGTTTGGAAAAGTCGTGG GCAGTATCTCGGTGGATCCTGGGAGGTATGACCTCGGCCTGAACTTCAAG CAGAACGGGAAGTACCAGCTGCTGGGATACAGCAAGTGAGCGTGCGTCTT TTTTCCATGGCCCCAATGGGCGTGTGCTCTGTGCCACAGAGCCAGCACGC TCATTACACTTTGAAGTGCTTGGCAAACCTGCAGACCCTATTTTTTGGTC TTCCACCCCTGCTATGCAGTACAGTGTGGTCCTGTCTCCTACCTGAAATG AAGGGCTACCTCATCTCACCAACTACTGTAAATTCTAAACTTAAATTTAA ATTTGCCCTGGAAAACTGAAAATCCCCAGGTGTGTCCTAAAGAAAGAGAG GGTGTGGTCTTATGCTGACACGGTAAAGATTGCCGGCTCCTCACAAGAGG ATGAAGAGCCGGAGGTGAGGGGTGATAGTATCTGTGTGCAGGGGGGGGGG GAAGGAGAGAGAGGGTTGTCAGCATAGCCCTTGGTTATGCAAGGATGATT TTGCTTGTGTATTGAACAACTGGAAGAAGACTGGGGAACCTCCAAGGTCC CCCAAGTTGTCGTGTCCATGGCTCCATGCCCACACACAGCACTGCATTTT GAAGATCATCAGAGTAGACCCTAACTATAAGGGAAGGAAGCTTGTTGCTC CCTCTCTTGGTGACACACACAGCCCTCAGTCTTGTCTCTCCCCCAGTAAC CCCCCCCCCCAAGAAATGCACCACATAGCTTGATGCTCTACACATACACT CTCCGCCGCCATGTGTCAGGTCGCTGAATGGCAGTACTCAGAGGAGGCGG TGAAGCTCGTGGTTCAGTACCGCCACAAGTTCCCACAGTTGTTCCACAGC CTGGCAAGGCGTTCTGGCGAGCGCTTCTACGAGGCCCAGGTGCATCTCGG G
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9807:241..4441-

>mRNA_D-mesarthrocarpus_Contig9807.1.1 ID=mRNA_D-mesarthrocarpus_Contig9807.1.1|Name=mRNA_D-mesarthrocarpus_Contig9807.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=780bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9807:241..4441- (Discosporangium mesarthrocarpum MT17_79)
ATGAAACAGGCGTCCTATCTCACCGGTCGGGGAGTTCCAGGCAGCGCAGG
CGTGGACATCGGGAAGATCCAGCTGATGCTTCGGGTAACACCCCTTCAGG
GGATGAGGATCGACACAAAGACGGGTGCCCGCCGCAAGGTCTTTGGCATA
GAGGAGGCAGACGTCCCAGTGCACATGGCGCTCTGGTCCTGCCCAGCCCC
TGACCCTAGGTTCGAGGAGAGAGACAAGCTCACCCTGGGGACCAGGTTCC
CCATCGGTTGCCGGGTGATATGCCTCCATGGGGGCCAGGGACATGGCTGC
TTGGGCGATGTGGTGGGCCACAACAGGCAGAACACCAAGGCACGTAGTAT
GCTGTATCGGCCACCAGAGCCTCCGTTTGGTCAAGCAATCGTACAGACAG
TCAAGGCTGTCTACTACCCTTCCGTCCACATCTGCACGAAGCTTGGGATA
CCCTCCCATGTGTTTGGAAAAGTCGTGGGCAGTATCTCGGTGGATCCTGG
GAGGTATGACCTCGGCCTGAACTTCAAGCAGAACGGGAAGTACCAGCTGC
TGGGATACAGCAAGTGTGTCCTAAAGAAAGAGAGGGTGTGGTCTTATGCT
GACACGGTAAAGATTGCCGGCTCCTCACAAGAGGATGAAGAGCCGGAGGT
CGCTGAATGGCAGTACTCAGAGGAGGCGGTGAAGCTCGTGGTTCAGTACC
GCCACAAGTTCCCACAGTTGTTCCACAGCCTGGCAAGGCGTTCTGGCGAG
CGCTTCTACGAGGCCCAGGTGCATCTCGGG
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