mRNA_D-mesarthrocarpus_Contig9343.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9343.3.1
Unique NamemRNA_D-mesarthrocarpus_Contig9343.3.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9343.3.1 vs. uniprot
Match: A0A835YL82_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL82_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 7.790e-16
Identity = 42/105 (40.00%), Postives = 62/105 (59.05%), Query Frame = 1
Query:    1 GYMLLSITVLGPGDRPPYHDRKRELQEELKKAGIKEGELQNVSALMPH-------QISQKLHFLVVTVYMGVDIPPLDSLLGRNSIDAYVLVKFADSDPIRTRVV 294
            G +LLS+T++GPG++ P+HDR++E++ E      +      V AL P        Q +  L FLVV +Y   DIPP+DS LG   +DAYVLVKF +   ++ + V
Sbjct:  513 GQLLLSVTIIGPGEKAPHHDRRKEIEAESASVATRP-----VIALTPPVQQQASLQDAGTLRFLVVNLYRAADIPPMDSGLGGKGVDAYVLVKFGEQPDVKCKAV 612          
BLAST of mRNA_D-mesarthrocarpus_Contig9343.3.1 vs. uniprot
Match: A0A8K1C9C4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C9C4_PYTOL)

HSP 1 Score: 77.8 bits (190), Expect = 1.290e-14
Identity = 42/103 (40.78%), Postives = 63/103 (61.17%), Query Frame = 1
Query:    1 GYMLLSITVLGPGDR----PPYHDRKRELQEELKKAGIKEGELQNVSALMPHQISQKLHFLVVTVYMGVDIPPLD-SLLGRNSIDAYVLVKFADSDPIRTRVV 294
            GY+LLSI VLGPGD+     PY D++ +  + L K  I      N   L+P ++ Q L++LVVT+Y   D+P +D ++L R  IDAY +VKFA  + + T+ +
Sbjct:  665 GYLLLSIVVLGPGDKLKIHSPYEDKEAQSSDVLSKNDI------NSLVLIPPRVIQTLNYLVVTIYQAKDLPDMDQNMLKRGGIDAYAVVKFAGDEALETKKI 761          
BLAST of mRNA_D-mesarthrocarpus_Contig9343.3.1 vs. uniprot
Match: A0A024TTP8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TTP8_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 4.460e-14
Identity = 44/99 (44.44%), Postives = 59/99 (59.60%), Query Frame = 1
Query:    1 GYMLLSITVLGPGDRPPYHDRKRELQEELKKAGIKEGELQNVSALMPHQISQKLHFLVVTVYMGVDIPPLD-SLLGRNSIDAYVLVKFADSDPIRTRVV 294
            GY+LLSI VLGPGD+   HD             +KE   +N   LMP ++SQ LHFLVVTV+    +P +D +++ +  IDAYV V+FA   P+ TR V
Sbjct:  521 GYLLLSIAVLGPGDKYHIHDV----------TDVKE---ENEMVLMPPRLSQALHFLVVTVHRAEGLPNMDKTMVSKGGIDAYVKVQFAGEKPLTTRTV 606          
BLAST of mRNA_D-mesarthrocarpus_Contig9343.3.1 vs. uniprot
Match: A0A485K7P4_9STRA (Aste57867_468 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K7P4_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 4.460e-14
Identity = 45/99 (45.45%), Postives = 60/99 (60.61%), Query Frame = 1
Query:    1 GYMLLSITVLGPGDRPPYHDRKRELQEELKKAGIKEGELQNVSALMPHQISQKLHFLVVTVYMGVDIPPLD-SLLGRNSIDAYVLVKFADSDPIRTRVV 294
            GY+LLSI VLGPGD+   H+ K +L EE            N   LMP +I+Q LHFLVVTV+    +P +D +++ +  IDAYV V+FA   P+ TR V
Sbjct:  538 GYLLLSIAVLGPGDKILIHEDK-DLPEE------------NEMVLMPPRIAQTLHFLVVTVHRAEGLPNMDKTMVNKGGIDAYVKVQFAGEKPLTTRTV 623          
BLAST of mRNA_D-mesarthrocarpus_Contig9343.3.1 vs. uniprot
Match: A0A6G0WHM1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHM1_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 6.090e-14
Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = 1
Query:    1 GYMLLSITVLGPGDRPPYHDRKRELQEELKKAGIKEGELQNVSALMPHQISQKLHFLVVTVYMGVDIPPLD-SLLGRNSIDAYVLVKFADSDPIRTRVV 294
            GY+LLS+ VLGPGD+   HD K ++Q+E            N   LMP +++Q L+FLVVTV+    +P +D +++ +  IDAYV V+FA   P+ TR V
Sbjct:  516 GYLLLSVAVLGPGDKIQIHDDK-DIQQE------------NEMVLMPPRLAQSLYFLVVTVHRAEGLPNMDKTMINQGGIDAYVKVQFAGEKPLTTRTV 601          
BLAST of mRNA_D-mesarthrocarpus_Contig9343.3.1 vs. uniprot
Match: K3WXL3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXL3_GLOUD)

HSP 1 Score: 73.9 bits (180), Expect = 2.900e-13
Identity = 46/103 (44.66%), Postives = 59/103 (57.28%), Query Frame = 1
Query:    1 GYMLLSITVLGPGDRPPYHDRKREL----QEELKKAGIKEGELQNVSALMPHQISQKLHFLVVTVYMGVDIPPLD-SLLGRNSIDAYVLVKFADSDPIRTRVV 294
            GY+LLSI VLGPGD+   HD   +     Q+   K  I      N   L+P ++SQ LH+LVVTV +  D+P +D S+L    IDAYV V FA  D + TR V
Sbjct:  625 GYLLLSIVVLGPGDKLKIHDPAEDKTTLDQDVASKKDI------NSLVLVPPRVSQTLHYLVVTVLIAEDLPDMDKSMLHSGGIDAYVRVYFAGQDILETRKV 721          
BLAST of mRNA_D-mesarthrocarpus_Contig9343.3.1 vs. uniprot
Match: A0A7S2BB98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BB98_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.010e-13
Identity = 35/96 (36.46%), Postives = 58/96 (60.42%), Query Frame = 1
Query:    1 GYMLLSITVLGPGDRPPYHDRKRELQEELKKAGIKEGELQNVSALMPHQISQKLHFLVVTVYMGVDIPPLDSLLGRNSIDAYVLVKFADSDPIRTR 288
            GY+ +S+TVLGPGD+  +HD ++E +E  +K        +   A+    I  KLHFLVV+V+   D+P ++S +  +  + YV V FA + P++T+
Sbjct:   39 GYLKVSLTVLGPGDKQKFHDLEKEYEEAKEK--------EESGAVSGPDIKPKLHFLVVSVFWAADLPMMESGITGSGTNCYVRVDFAGNPPLKTK 126          
BLAST of mRNA_D-mesarthrocarpus_Contig9343.3.1 vs. uniprot
Match: A0A5D6YDW2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDW2_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.880e-12
Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = 1
Query:    1 GYMLLSITVLGPGDRPPYHDRKRELQEELKKAGIKEGELQNVSALMPHQISQKLHFLVVTVYMGVDIPPLD-SLLGRNSIDAYVLVKFADSDPIRTRVV 294
            GY+LLSI VLGPGD+   HD   + +  + +    + ++ N   L+P ++SQ L +LVVTV +  D+P +D S++    IDAYV V FA  D + T+ V
Sbjct:  598 GYLLLSIVVLGPGDKLKLHDPSEDKKSLMDQDVASKKDI-NSMVLVPPRVSQTLQYLVVTVLLAEDLPDMDKSMMHMGGIDAYVRVYFAGQDVLETKKV 695          
BLAST of mRNA_D-mesarthrocarpus_Contig9343.3.1 vs. uniprot
Match: A0A485KP15_9STRA (Aste57867_9797 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KP15_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.210e-11
Identity = 39/101 (38.61%), Postives = 59/101 (58.42%), Query Frame = 1
Query:    1 GYMLLSITVLGPGDRPPYHDRKRELQEELKKAGIKEGELQNVSALM-PHQISQKLHFLVVTVYMGVDIPPLD--SLLGRNSIDAYVLVKFADSDPIRTRVV 294
            G++LLS+ ++GPG+  P HD        +  A I    L++   L+ P  + QK+HFLVVT+Y+  D+PP+D   ++    IDA+V V FA S   +T VV
Sbjct:  365 GFLLLSLAMVGPGESFPVHD--------VTAATIDPSALESPHLLLLPPTVEQKVHFLVVTIYLAEDLPPMDMNGVMSTMGIDAFVRVDFAGSKKCKTNVV 457          
BLAST of mRNA_D-mesarthrocarpus_Contig9343.3.1 vs. uniprot
Match: A0A2D4BLF6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLF6_PYTIN)

HSP 1 Score: 68.9 bits (167), Expect = 1.660e-11
Identity = 40/104 (38.46%), Postives = 55/104 (52.88%), Query Frame = 1
Query:    1 GYMLLSITVLGPGDR-----PPYHDRKRELQEELKKAGIKEGELQNVSALMPHQISQKLHFLVVTVYMGVDIPPLD-SLLGRNSIDAYVLVKFADSDPIRTRVV 294
            GY+LLSI VLGPGDR     PP           + K  I      N   L+P ++ Q LH+LVVT+Y   D+P +D S++ +  +D Y  V FA  D + T+ V
Sbjct:  559 GYLLLSIVVLGPGDRLRIRPPPSRHEDEPADRVVTKDDI------NSLVLVPPRVIQTLHYLVVTIYQAQDLPDMDQSMMKKGGVDGYAKVYFAGQDVLETKKV 656          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9343.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YL82_9STRA7.790e-1640.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8K1C9C4_PYTOL1.290e-1440.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024TTP8_9STRA4.460e-1444.44Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A485K7P4_9STRA4.460e-1445.45Aste57867_468 protein n=1 Tax=Aphanomyces stellatu... [more]
A0A6G0WHM1_9STRA6.090e-1442.42Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
K3WXL3_GLOUD2.900e-1344.66Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S2BB98_9STRA5.010e-1336.46Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A5D6YDW2_9STRA1.880e-1240.40Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A485KP15_9STRA1.210e-1138.61Aste57867_9797 protein n=1 Tax=Aphanomyces stellat... [more]
A0A2D4BLF6_PYTIN1.660e-1138.46Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9343contigD-mesarthrocarpus_Contig9343:3837..4771 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog115417.EPrPW00000022927
PFAMsC2
Model size294
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.26e-14
EggNOG OGsKOG1326@1|root,KOG1326@2759|Eukaryota,1MAYS@121069|Pythiales
DescriptionMyoferlin. Source PGD
Cds size288
COG categoryM
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791088.377621-UTR-D-mesarthrocarpus_Contig9343:3836..38421680791088.377621-UTR-D-mesarthrocarpus_Contig9343:3836..3842Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9343 3837..3842 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791088.391295-CDS-D-mesarthrocarpus_Contig9343:3842..39801680791088.391295-CDS-D-mesarthrocarpus_Contig9343:3842..3980Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9343 3843..3980 +
1680791088.402177-CDS-D-mesarthrocarpus_Contig9343:4621..47711680791088.402177-CDS-D-mesarthrocarpus_Contig9343:4621..4771Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9343 4622..4771 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9343.3.1prot_D-mesarthrocarpus_Contig9343.3.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9343 3843..4771 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9343.3.1

>prot_D-mesarthrocarpus_Contig9343.3.1 ID=prot_D-mesarthrocarpus_Contig9343.3.1|Name=mRNA_D-mesarthrocarpus_Contig9343.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=96bp
MLLSITVLGPGDRPPYHDRKRELQEELKKAGIKEGELQNVSALMPHQISQ
KLHFLVVTVYMGVDIPPLDSLLGRNSIDAYVLVKFADSDPIRTRVV
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mRNA from alignment at D-mesarthrocarpus_Contig9343:3837..4771+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9343.3.1 ID=mRNA_D-mesarthrocarpus_Contig9343.3.1|Name=mRNA_D-mesarthrocarpus_Contig9343.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=935bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9343:3837..4771+ (Discosporangium mesarthrocarpum MT17_79)
GGCTACATGCTTCTGTCCATCACGGTACTGGGACCAGGGGACAGGCCCCC GTACCACGACCGCAAGAGGGAGTTGCAGGAGGAGTTAAAGAAGGCAGGCA TCAAGGAAGGGGAGCTGCAGAACGTGTCAGCGCTCATGCCTCATGTAAGG AGGGCTATGTCTTGTCTTACAGCACTGCCCGGGACCAGATTCACCTGATA TGTGTTGATGTTTCCTTGGTTCTTTATCGGTGTCGAGCCCAAAATGTTCA GCAATCAGCACAAGTAGACATGACCGTAGATGAAGTGGGGGACCTGGGCG GGGATACAATGATGGGGGTGGGGGGCACAGTAACAAACTGATGATGAGTT TTTTTTCTTGCTGTGCTTGAACAGGAAGTGTCTCCGACAGAGGTGAAGAG TGAAGCAGGGATTGTTCCAAAGAGACTCCTGAATCTCTGTGTCTTGTCGA CTTCACTTCAAAACGCCTGGGTCACAGGGAACTGCGTGGCAGTCACACTC AGTACTTCATCTACTGCCCACCCAAGTGTAGCCACCCATACTGCTGTGTA TTACACTTGTAGTTTGCTTGCCTCAGCTCCTGCTTGCATTCTCTTGGGGT ACCTCCCCTGATGGTTGCCTATATCTGGGCAAACCATAATCAAACCCTGC ACCTTATCTGCTTATTTTTGTGTTCATTGTCCTTGTCTTTGCTCTCGCTC CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTACCCCCCCCCCCACCT CTTTCACCCTGTGCTTGACATGTATCTGTGCTGAGCAGATCTCTCAGAAA CTCCACTTCCTGGTGGTGACAGTGTACATGGGTGTTGATATTCCCCCTTT GGACTCACTCCTGGGGAGGAATTCGATTGACGCCTATGTCCTGGTTAAGT TTGCGGACTCAGACCCCATCCGAACCAGGGTGGTG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9343:3837..4771+

>mRNA_D-mesarthrocarpus_Contig9343.3.1 ID=mRNA_D-mesarthrocarpus_Contig9343.3.1|Name=mRNA_D-mesarthrocarpus_Contig9343.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=288bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9343:3837..4771+ (Discosporangium mesarthrocarpum MT17_79)
ATGCTTCTGTCCATCACGGTACTGGGACCAGGGGACAGGCCCCCGTACCA
CGACCGCAAGAGGGAGTTGCAGGAGGAGTTAAAGAAGGCAGGCATCAAGG
AAGGGGAGCTGCAGAACGTGTCAGCGCTCATGCCTCATCAGATCTCTCAG
AAACTCCACTTCCTGGTGGTGACAGTGTACATGGGTGTTGATATTCCCCC
TTTGGACTCACTCCTGGGGAGGAATTCGATTGACGCCTATGTCCTGGTTA
AGTTTGCGGACTCAGACCCCATCCGAACCAGGGTGGTG
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