prot_D-mesarthrocarpus_Contig9076.3.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig9076.3.1
Unique Nameprot_D-mesarthrocarpus_Contig9076.3.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length45
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9076.3.1 vs. uniprot
Match: D7FHS8_ECTSI (SNF2 helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS8_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.560e-8
Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    1 RELVAARTLWRSHLDLLSELDELSSCTTSLRLADPGE--RLEALSEE 45
            REL+A+R LWR+HLDLLS +DEL SC T LRLAD  E  RL  L+EE
Sbjct: 1926 RELLASRALWRAHLDLLSNIDELGSCVTPLRLADSDEEARLGLLTEE 1972          
BLAST of mRNA_D-mesarthrocarpus_Contig9076.3.1 vs. uniprot
Match: A0A6H5JYY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYY0_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 1.560e-8
Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    1 RELVAARTLWRSHLDLLSELDELSSCTTSLRLADPGE--RLEALSEE 45
            REL+A+R LWR+HLDLLS +DEL SC T LRLAD  E  RL  L+EE
Sbjct: 1833 RELLASRALWRAHLDLLSNIDELGSCVTPLRLADSDEEERLGLLTEE 1879          
BLAST of mRNA_D-mesarthrocarpus_Contig9076.3.1 vs. uniprot
Match: A0A1Z5KGE3_FISSO (E3 ubiquitin-protein ligase SHPRH n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGE3_FISSO)

HSP 1 Score: 50.4 bits (119), Expect = 5.980e-6
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    1 RELVAARTLWRSHLDLLSELDELSSCTTSLRLADPGERLEALSEE 45
            RE  AA  +WR+HLDLL++LDEL  C +S+RL   GE +  LSEE
Sbjct: 1494 RERAAAWRMWRTHLDLLNDLDELGQCKSSMRLLYDGEDVTTLSEE 1538          
BLAST of mRNA_D-mesarthrocarpus_Contig9076.3.1 vs. uniprot
Match: A0A1Z5JRD4_FISSO (E3 ubiquitin-protein ligase SHPRH n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JRD4_FISSO)

HSP 1 Score: 47.4 bits (111), Expect = 7.360e-5
Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 RELVAARTLWRSHLDLLSELDELSSCTTSLRLADPGERLEALSEE 45
            RE  AA  +WR+HLDLL++LDEL  C +S+R+    E +  LSEE
Sbjct: 1493 RERAAAWRMWRTHLDLLNDLDELGQCKSSMRILYDNEDVTTLSEE 1537          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9076.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FHS8_ECTSI1.560e-865.96SNF2 helicase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5JYY0_9PHAE1.560e-865.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Z5KGE3_FISSO5.980e-655.56E3 ubiquitin-protein ligase SHPRH n=1 Tax=Fistulif... [more]
A0A1Z5JRD4_FISSO7.360e-551.11E3 ubiquitin-protein ligase SHPRH n=1 Tax=Fistulif... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9076contigD-mesarthrocarpus_Contig9076:4061..4195 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9076.3.1mRNA_D-mesarthrocarpus_Contig9076.3.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig9076 4061..4195 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig9076.3.1 ID=prot_D-mesarthrocarpus_Contig9076.3.1|Name=mRNA_D-mesarthrocarpus_Contig9076.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=45bp
RELVAARTLWRSHLDLLSELDELSSCTTSLRLADPGERLEALSEE
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