mRNA_D-mesarthrocarpus_Contig10175.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10175.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10175.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: A0A6H5JUA1_9PHAE (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUA1_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 3.860e-77
Identity = 140/277 (50.54%), Postives = 185/277 (66.79%), Query Frame = 1
Query:    1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFIT-MYWGMGIISASLLGLVLSSVIG--EEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVNKKPSVMEL--IGQKVVNHFGNGCTGGEGVVRALTLQESGGEQVD---VGDVRELFRTPIMRRATLCLWMVWFFINFSYFGLVFLLPMYYGR--EGNSNDMYLQTGASGAAFMPG 801
            GML GA F SIYAD++GRR AF+ SL  +F G + SAL+P+ Y L   R LVGFG+GGNLPV ++L  EFLPT+ RAK L  +  ++WG+G+ISASLLGL+L++V+G  +E+ MWRWFLG A LPSA++  AY ++PESPRFL V GRH +AMQ+LE VA +N K  V+ L   GQ        G   GE     +    + G + D    G+VRELF TPI+RR TL LW+VW  +N SY+G+ FLLP YY     G ++ +Y+ +   GA F+PG
Sbjct:   56 GMLVGAGFWSIYADKRGRRTAFVSSLACVFVGGVFSALSPSLYILCLCRVLVGFGVGGNLPVTTALVTEFLPTDERAKILCRVAGIFWGVGMISASLLGLILANVLGPGQEETMWRWFLGAAALPSAMVAVAYRLLPESPRFLQVMGRHDEAMQVLERVARINGKLDVLGLDFSGQATGLRSDGGGRDGEAAAAGIGQSATYGRKADNIEAGEVRELFHTPILRRITLSLWVVWLTLNISYYGVTFLLPRYYDEISGGEADFVYILSALVGATFIPG 332          
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: A0A6H5JDE1_9PHAE (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDE1_9PHAE)

HSP 1 Score: 249 bits (635), Expect = 4.980e-75
Identity = 149/330 (45.15%), Postives = 205/330 (62.12%), Query Frame = 1
Query:    1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFIT-MYWGMGIISASLLGLVLSSVIG--EEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVNKKPSVMEL--IGQKV-------VNHFGNGCTGGEGVVRALTLQESGGEQVDVGDVRELFRTPIMRRATLCLWMVWFFINFSYFGLVFLLPMYYGR--EGNSNDMYLQTGASGAAFMPGMSCKVNAGVDAVSRLSILSDVRIARQNMPQRVKAWGMYSIYAXXXYLVT 948
            GML GA   SIYAD++GRR AF+ SL  +F G + SAL+P+++ L   R +VGFG+GGNLPV ++L  EFLPT+ RA  L     ++WG+G+I ASL GL+L++V+G  +E+ MWRWFLG+A LPSA++  AY ++PESPRFL V GRH +AMQ+LE+VA +N +  V+ L   GQ V       +   G     G G   A  +QE+  E  + GDVRELF TPI+RR TL LW+VWF +N SYFG+ FLLP YY +   G +N +Y+ +   GA F+PG          A + + + S+ R+ R    +    W  Y+  A    L T
Sbjct:   34 GMLVGAGSWSIYADKRGRRTAFVSSLACVFVGGVLSALSPSFFVLCLCRAVVGFGVGGNLPVTTALITEFLPTDDRANILCATAGIFWGIGMIFASLFGLMLANVLGPGKEEAMWRWFLGVAALPSAIVAVAYRLLPESPRFLQVMGRHDEAMQVLEHVARMNGRLDVLGLGFSGQAVGEGDPLYLRTAGLSVAAGIGDA-AAHVQEA--ENAEAGDVRELFHTPILRRITLSLWVVWFTVNISYFGVTFLLPRYYDKISGGQANFVYILSALVGATFIPG----------AFAAMWLCSERRLGRVGALK----WSSYATAAAVILLAT 346          
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: A0A6H5JL66_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL66_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 1.400e-70
Identity = 148/339 (43.66%), Postives = 202/339 (59.59%), Query Frame = 1
Query:    1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFIT-MYWGMGIISASLLGLVLSSVIG--EEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVNKKPSVMEL--IGQKVVNHFGNGCTGGEGVVRALTLQ-----ESGG-----------EQVDVGDVRELFRTPIMRRATLCLWMVWFFINFSYFGLVFLLPMYYGR--EGNSNDMYLQTGASGAAFMPGMSCKVNAGVDAVSRLSILSDVRIARQNMPQRVKAWGMYSIYAXXXYLVT 948
            GML GA F SIYAD++GRR AF+ SL   F G + SA + +++ L   R LVGFG+GGNLPVA++L  EF+PTN R+  L      +WG+G+ISASLLGL+L++V+G  +E+ MWRWFLG+A LPSA++  AY ++PESPRFL V GRH +A+Q+LE+VA +N K  V+ L   GQ V          GEG    L +      +SGG           E  + GDVRELF TPI+RR TL LW+VWF +N S FG+ FLLP YY +   G ++ +Y+ +   G   +PG          A + + + S+ R+ R    +    W  Y+  A    L T
Sbjct:  118 GMLVGAGFWSIYADKRGRRTAFVSSLACAFVGGVFSAFSSSFHLLCLCRVLVGFGVGGNLPVATALVTEFVPTNDRSNVLCTTAGTFWGIGMISASLLGLILANVLGAGKEEAMWRWFLGVAALPSAIVAVAYQLLPESPRFLQVMGRHDEAIQVLEHVARMNGKLDVLGLDFSGQSV----------GEGDNLRLRIAGSSDLDSGGIGDASAHGQEAENAEAGDVRELFHTPILRRITLSLWVVWFTVNISNFGVTFLLPRYYDKISGGQADFVYILSACVGVTCIPG----------AFAAMWLCSEHRLGRVGALK----WSSYATAAAVILLAT 432          
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: D7FV27_ECTSI (Major facilitator transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV27_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 3.080e-68
Identity = 144/330 (43.64%), Postives = 198/330 (60.00%), Query Frame = 1
Query:    1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFIT-MYWGMGIISASLLGLVLSSVIG--EEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVNKKPSVMEL--IGQKV-------VNHFGNGCTGGEGVVRALTLQESGGEQVDVGDVRELFRTPIMRRATLCLWMVWFFINFSYFGLVFLLPMYYGR--EGNSNDMYLQTGASGAAFMPGMSCKVNAGVDAVSRLSILSDVRIARQNMPQRVKAWGMYSIYAXXXYLVT 948
            GML GA F SIYAD++GRR AF+ SL  +F G + SAL+P+++ L   R LVGFG+GGNLPV ++L  EFLPTN R+  L      +WG+G+ISASLLGL+L++V+G  +E+ MWRWFLG+A LPSA++  AY ++PESPRFL V GRH +A+Q+LE+VA +N K  V+ L   GQ V       +   G+      G+  A T  +   E  + GDVRELF TPI+RR TL L          YFG+ FLLP YY +   G ++ +Y+ +   GA F+PG          A + + + S+ R+ R    +    W  Y+  A    L T
Sbjct:   34 GMLVGAGFWSIYADKRGRRTAFVSSLACVFVGGVFSALSPSFHVLCLCRVLVGFGVGGNLPVTTALVTEFLPTNDRSNVLCVTAGTFWGVGMISASLLGLILANVLGPGKEEAMWRWFLGVAALPSAIVAVAYRLLPESPRFLQVMGRHDEAIQVLEHVARMNGKLDVLGLDFSGQAVGEGDNLRLRMAGSSDLDSGGIGDASTHGQEA-ENAEAGDVRELFHTPILRRITLSL----------YFGVTFLLPRYYDKISGGQADFVYILSAFVGATFIPG----------AFAAMWLCSEHRLGRVGALK----WSSYATAAAVILLAT 338          
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: A0A251PU65_PRUPE (MFS domain-containing protein n=1 Tax=Prunus persica TaxID=3760 RepID=A0A251PU65_PRUPE)

HSP 1 Score: 139 bits (351), Expect = 3.380e-34
Identity = 89/246 (36.18%), Postives = 138/246 (56.10%), Query Frame = 1
Query:    1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFITMYWGMGIISASLLGLVLSSVIGEEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVN--KKPSVMELIGQKVVNHFGNGCTGGEGVVRALTLQESGGEQVDVGDVR-----ELFRTPIMRRATLCLWMVWFFINFSYFGLVFL 717
            GML GA    I +D+ GRR  F+++  I       SAL+PNY +L+ LRCLVG GLGG  PV SS   EF+P  +R   +   + +W +G I  + L   +   +G     WRW LGL+ LPS++L+  Y++ PESPR+L ++GR  +A+ ILE VA +N  K PS   +   K+     +  +    ++     +++  +++D  D+       +  +P + R+TL LW+V+F   FSY+GLV L
Sbjct:   72 GMLVGAYSWGIVSDKHGRRKGFLITATITSGAGFLSALSPNYTSLILLRCLVGVGLGGG-PVLSSWFLEFIPAPNRGTWMVVFSAFWTLGTILEASLAWFVMPTLG-----WRWLLGLSSLPSSLLLVFYWLAPESPRYLCLKGRTTEAINILERVARLNGTKLPSGNLVSDLKIELSEKSTLSEDARLISPTENEDTSSKEMDSSDMGGISSLSMLLSPKLVRSTLLLWVVFFGNAFSYYGLVLL 311          
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: A0A7J7CYM6_TRIWF (Organic cation/carnitine transporter 7-like n=3 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CYM6_TRIWF)

HSP 1 Score: 140 bits (354), Expect = 6.370e-34
Identity = 95/244 (38.93%), Postives = 137/244 (56.15%), Query Frame = 1
Query:    1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFITMYWGMG-IISASLLGLVLSSVIGEEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVN--KKPSVMELIGQKVVNHFGNGCTGGEGVVRALTLQESGGEQVDVGDVRELFR--TPIMRRATLCLWMVWFFINFSYFGLVFL 717
            GML GA    + +D+ GRR  F+++ V+       SA +PNY +L+ALRCLVG GLGG  PV  S   EF+P  SR   +   + +W +G I+ ASL  LV+  +       WRW L L+ +PS++L+  Y V PESPRFL + GR K A  +LE +A +N  K P  + L+ ++ +   G   +  EG       + S G + + G +  L    +P + R+TL LWMV+F   FSY+GLV L
Sbjct:   72 GMLVGAYSWGLVSDKYGRRKGFLITAVVTSVAGFLSAFSPNYLSLIALRCLVGVGLGGG-PVLVSWFLEFIPAPSRGTWMVIFSAFWTVGTILEASLAWLVMPRL------GWRWLLALSAVPSSLLLLFYGVTPESPRFLCLNGRRKDAQNVLEKIARLNGTKLPPGI-LVSERELEEHGKNISS-EGSKLLGEDKSSEGLESNFGGISSLLILFSPRLVRSTLLLWMVFFGNAFSYYGLVLL 306          
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: A0A314UUE2_PRUYE (Organic cation/carnitine transporter 7 n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314UUE2_PRUYE)

HSP 1 Score: 143 bits (361), Expect = 6.620e-34
Identity = 91/246 (36.99%), Postives = 139/246 (56.50%), Query Frame = 1
Query:    1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFITMYWGMGIISASLLGLVLSSVIGEEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVN--KKPSVMELIGQKVVNHFGNGCTGGEGVVRALTLQESGGEQVDVGDVR-----ELFRTPIMRRATLCLWMVWFFINFSYFGLVFL 717
            GML GA    I +D+ GRR  F+++  I F     SAL+PNY +L+ LRCLVG GLGG  PV SS   EF+P  +R   +   + +W +G I  + L   +   +G     WRW LGL+ LPS++L+  Y+V PESPR+L ++GR  +A+ ILE VA +N  K PS   +   K+     +  +    ++     +++  +++D  D+       +  +P + R+TL LW+V+F   FSY+GLV L
Sbjct:   72 GMLVGAYTWGIVSDKHGRRKGFLITATITFGAGFLSALSPNYSSLILLRCLVGVGLGGG-PVLSSWFLEFIPAPNRGTWMVVFSAFWTLGTILEASLAWFVMPTLG-----WRWLLGLSSLPSSLLLVFYWVAPESPRYLCLKGRTTEAINILERVARLNGTKLPSGNLVSDLKIELSEKSTLSEDARLISPTENEDTSPQEMDSSDMGGISSLSMLLSPKLVRSTLLLWVVFFGNAFSYYGLVLL 311          
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: M5WTD2_PRUPE (MFS domain-containing protein n=6 Tax=Prunus TaxID=3754 RepID=M5WTD2_PRUPE)

HSP 1 Score: 139 bits (351), Expect = 1.720e-33
Identity = 89/246 (36.18%), Postives = 138/246 (56.10%), Query Frame = 1
Query:    1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFITMYWGMGIISASLLGLVLSSVIGEEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVN--KKPSVMELIGQKVVNHFGNGCTGGEGVVRALTLQESGGEQVDVGDVR-----ELFRTPIMRRATLCLWMVWFFINFSYFGLVFL 717
            GML GA    I +D+ GRR  F+++  I       SAL+PNY +L+ LRCLVG GLGG  PV SS   EF+P  +R   +   + +W +G I  + L   +   +G     WRW LGL+ LPS++L+  Y++ PESPR+L ++GR  +A+ ILE VA +N  K PS   +   K+     +  +    ++     +++  +++D  D+       +  +P + R+TL LW+V+F   FSY+GLV L
Sbjct:   72 GMLVGAYSWGIVSDKHGRRKGFLITATITSGAGFLSALSPNYTSLILLRCLVGVGLGGG-PVLSSWFLEFIPAPNRGTWMVVFSAFWTLGTILEASLAWFVMPTLG-----WRWLLGLSSLPSSLLLVFYWLAPESPRYLCLKGRTTEAINILERVARLNGTKLPSGNLVSDLKIELSEKSTLSEDARLISPTENEDTSSKEMDSSDMGGISSLSMLLSPKLVRSTLLLWVVFFGNAFSYYGLVLL 311          
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: A0A803LVV0_CHEQI (MFS domain-containing protein n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LVV0_CHEQI)

HSP 1 Score: 137 bits (345), Expect = 1.440e-32
Identity = 92/262 (35.11%), Postives = 142/262 (54.20%), Query Frame = 1
Query:    1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFITMYWGMGIISASLLGLVLSSVIGEEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVNKK---PSVMEL-IGQKVVNHFGNGCTGGEGVVRALTLQESGGEQVDVGDVRELFRTPIMRR---ATLCLWMVWFFINFSYFGLVFLLPMYYGREGNSNDMYL 765
            GM  GA    + +D+ GRR  F+ S V+     + SA +PN+  L+  RCLVG GLG + PV  +   EF+P  SR   +     +W +G I+ + L  ++   +G     WRW LGL+ LPS +L+  YF+ PESPR+L ++GR K+A+Q+LE +A +N K   P V+   + Q+ +N      TG EG   A        E  D+  VR  F+  + ++    TL LW+V+F   F+Y+G+V LL      + N+ D ++
Sbjct:   73 GMFVGAYSFGLISDKYGRRKGFVFSAVVTCAAGLLSAASPNFVVLLVARCLVGVGLGAS-PVLLTWFLEFVPAPSRGTWMVLFQAFWTIGSITEAALAWIIMPKLG-----WRWLLGLSVLPSFILLVFYFITPESPRYLCLKGRKKEAVQVLEKIARINGKELPPGVLVTDMEQEEINCPTKAVTGEEGAAPAKY------EDSDMSVVRS-FKVLLSKKLAPTTLLLWVVFFGNAFAYYGIV-LLTTELNTKDNTCDSHV 320          
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: A0A251VJ52_HELAN (Putative major facilitator superfamily protein n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251VJ52_HELAN)

HSP 1 Score: 136 bits (343), Expect = 2.820e-32
Identity = 91/261 (34.87%), Postives = 134/261 (51.34%), Query Frame = 1
Query:    1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFITMYWGMGIISASLLGLVLSSVIGEEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVNKKPSVMELIGQKVVNHFGNGCTGGEGVVRALTLQESGGEQVDVGDVRE-----LFRTPIMRRATLCLWMVWFFINFSYFGLVFLLPMYYGREGNSNDMYLQ 768
            GML GA    + +D+ GRR  F+++  +     + S+LAPNY  L+ LRCLVG GLGG  PV SS   EF+P  SR   +   + +W +G I  + +   +   +G     WRW L  + LPS++L+  Y V+PESPR+L ++GR  +A  ILE VA VN +P    ++            T  E    A  L    GE V+ G  +      +  +P + + TL LW+V+F   FSY+GLV L    +    +    +LQ
Sbjct:   93 GMLVGAYSWGVVSDKHGRRNGFLITATVTCVAGLLSSLAPNYICLIILRCLVGIGLGGG-PVLSSWFLEFIPAPSRGTWMVVFSAFWTVGTIFEASVAWFVMPTLG-----WRWLLAFSSLPSSLLLIFYRVVPESPRYLCLKGRITEARIILEKVAKVNGQPLPEGVLVSDHEIQLNEKPTEAE---EAHLLSSPNGETVEHGTKQNGSTMAMLFSPELIKPTLLLWVVFFGNAFSYYGLVLLTTELHNGRNSCVPAHLQ 344          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUA1_9PHAE3.860e-7750.54MFS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5JDE1_9PHAE4.980e-7545.15MFS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5JL66_9PHAE1.400e-7043.66MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FV27_ECTSI3.080e-6843.64Major facilitator transporter n=1 Tax=Ectocarpus s... [more]
A0A251PU65_PRUPE3.380e-3436.18MFS domain-containing protein n=1 Tax=Prunus persi... [more]
A0A7J7CYM6_TRIWF6.370e-3438.93Organic cation/carnitine transporter 7-like n=3 Ta... [more]
A0A314UUE2_PRUYE6.620e-3436.99Organic cation/carnitine transporter 7 n=1 Tax=Pru... [more]
M5WTD2_PRUPE1.720e-3336.18MFS domain-containing protein n=6 Tax=Prunus TaxID... [more]
A0A803LVV0_CHEQI1.440e-3235.11MFS domain-containing protein n=3 Tax=Chenopodium ... [more]
A0A251VJ52_HELAN2.820e-3234.87Putative major facilitator superfamily protein n=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10175contigD-mesarthrocarpus_Contig10175:114..4436 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FV28
PFAMsMFS_1,Sugar_tr
Model size1107
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons5
Evalue1.32e-77
EggNOG OGsKOG0253@1|root,KOG0253@2759|Eukaryota
DescriptionN-methylnicotinate transmembrane transporter activity
Cds size1104
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10175.1.1prot_D-mesarthrocarpus_Contig10175.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10175 117..4436 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789160.7005632-UTR-D-mesarthrocarpus_Contig10175:113..1161680789160.7005632-UTR-D-mesarthrocarpus_Contig10175:113..116Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10175 114..116 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789160.713458-CDS-D-mesarthrocarpus_Contig10175:116..4361680789160.713458-CDS-D-mesarthrocarpus_Contig10175:116..436Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10175 117..436 +
1680789160.725021-CDS-D-mesarthrocarpus_Contig10175:1685..18151680789160.725021-CDS-D-mesarthrocarpus_Contig10175:1685..1815Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10175 1686..1815 +
1680789160.7335443-CDS-D-mesarthrocarpus_Contig10175:2517..25771680789160.7335443-CDS-D-mesarthrocarpus_Contig10175:2517..2577Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10175 2518..2577 +
1680789160.7459555-CDS-D-mesarthrocarpus_Contig10175:3108..32901680789160.7459555-CDS-D-mesarthrocarpus_Contig10175:3108..3290Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10175 3109..3290 +
1680789160.7563984-CDS-D-mesarthrocarpus_Contig10175:4024..44361680789160.7563984-CDS-D-mesarthrocarpus_Contig10175:4024..4436Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10175 4025..4436 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10175.1.1

>prot_D-mesarthrocarpus_Contig10175.1.1 ID=prot_D-mesarthrocarpus_Contig10175.1.1|Name=mRNA_D-mesarthrocarpus_Contig10175.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=368bp
MLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCL
VGFGLGGNLPVASSLAAEFLPTNSRAKGLSFITMYWGMGIISASLLGLVL
SSVIGEEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQ
ILENVAWVNKKPSVMELIGQKVVNHFGNGCTGGEGVVRALTLQESGGEQV
DVGDVRELFRTPIMRRATLCLWMVWFFINFSYFGLVFLLPMYYGREGNSN
DMYLQTGASGAAFMPGMSCKVNAGVDAVSRLSILSDVRIARQNMPQRVKA
WGMYSIYAWGMYLVTCHAKPSSQQSSGPGSLRLIPSVVSSCNKRARFSFC
SLCVFHAVIVRLDWLVS*
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mRNA from alignment at D-mesarthrocarpus_Contig10175:114..4436+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10175.1.1 ID=mRNA_D-mesarthrocarpus_Contig10175.1.1|Name=mRNA_D-mesarthrocarpus_Contig10175.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4323bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10175:114..4436+ (Discosporangium mesarthrocarpum MT17_79)
GGGATGCTTTTTGGCGCCGTCTTTTTGTCTATCTATGCCGACCGGCAAGG GCGCCGGGCCGCCTTCATCCTCTCCTTGGTCATCATATTCTTCGGGGCCA TTGCGTCGGCCCTGGCCCCCAACTACTATGCCCTGGTGGCACTGCGGTGT CTGGTTGGTTTCGGACTTGGGGGCAACCTCCCTGTGGCGTCCTCCCTGGC GGCAGAGTTTCTACCCACAAACTCCAGGGCTAAAGGCCTGTCGTTCATCA CAATGTACTGGGGCATGGGAATCATCTCGGCGTCGTTACTGGGGCTGGTG CTGAGCAGCGTCATCGGAGAAGAGTGAGCTTATTGCAATGTGCCGTTAAT GCCCTCTCTGAAATACTCGATGTGAAAAAGTATCAAGGGTTTTATATTTG ACTGTAGTCAAGGTTATATCACAGCACCAAATCAGGAGTAATAAATTTGA CGGTCCTTTTGTTCATTTCGGATGAAATCAAGATTCATATCTTCGTATAT TGATGGACACAGAACATGCGGGCTGGAAAATCACAAGTTTTGAGGCTGTA ACTCTTTTCTGTGGCTAGATCTCTTGGGCTACTACGAGGTGAATCGGGTG ACTGCGGGTTGCTAACGGGTGGGCTGAGAAATTGCAGGCTATTCTAGAAG GCGATTGAAAAATCACAAAAACCATGGGTTAATAGCAGCTGTAGCATAAA ATGACGAACTAGGTGCTATTAACAGGTTAGCAATCACGTGAAGGGCATAG CCTTTTGAGGTGGATTGTGGTGACAGGTGACGAGACACTGCTAAGTGTTG AAGAAAGATAGCAACTGTTGGTAATGCGAGGATAGAGGCTCCACCGATAT CTCCTTGTTTTGATGAACGTATGATTTAAGCTCGTTCAAAGGGCGCTTCA AGGTAAGTCAAAGAACAGATGAGAATCAGGGAAAGTTCAGTATGCCACTC AGAATGCCATGCCCCAAATCAAAACAGTCCTCCAGCAGAGGGTGCTGCTC ATGCAGCAGCCTCCTTCTGGGTGTAGGCCTGGCCCTTGTTTCTTTCTTAG CTGTTTTTTTGCCGCCACCCTACAAGTCTCCCACCTCTTAATCCCCCATA TGTTTATCATGCCAAGACACCAGACCACAGCAACCGCATACAATACAGCC ACCACATACCCTTTGTCCTCGTGGATGATGTGTACTTGGTTGTAGGAAGT ATTACCATACCACTCATCCACCTTACCATGAACCCTCCCCCCTTGTGCTC TTTTTCCTGCCAAGGTGCAGGGAATCCCTAACCCTAAGTTTTGCTGTGAA GCTGATAAGGTCCCTGTGCAATGTGCTCGTATACAAGCGTCTTCCATACA GAAAGAAGAATGAAGGGACAAGCCAGAGGGCAGGGCCCCCTAAGTGTAAA TCTAGATCCCCAATCTTAACCTTAGCCGTAACCCACACCATCACCCTAAG CCCACCATAAATCTAAATCACATGGGTGAGCAGGTCTTGATTCCAAACAA AACGCCACACGCCTCCTCCCCCGGACTTGCCCCCTCTTCCTCTGACATGT GGGCACATGCATGGTGGGTTAGACAGCCCATGTGGCGCTGGTTTCTTGGT CTTGCAGGCCTGCCCAGTGCTGTTCTGGTGGCTGCGTATTTTGTGATCCC AGAGAGCCCACGGTTCCTTAGCGTCAGGGGACGGCATAAGCAGGCGATGC AGGTGACTAAAACAACAAAACGAAGCACAAGCGATGGGAGGGCATCATGG CGGCGGGTGTGTGTCCTTGGGGGTGCTGATGCGAGTCGGCTGCGCTCACC CTGACGTGCCGATTGGTGCCAGTTGGTGCTGATTGGTGCTGATTGGTGGG AGCTTTTCTCGCGCTTTTTCTTGCCTTGCACCCCCTGGTTGCGTGCGTGG TGAATCCCTGCTCCGCATGGCTGATCAGATGGTGATTTATGCACCTGTCG AAGTGTGTGGATACAATGCCACGAGTTGGTTCAAGTTATTGGTCAAAGTG TCAGTACTTTCAACACATTCCAACAAGTGACTGTCAATGGACAATAATTT TTCAACACATTCCAACAAGGGACTGTCAATGGACAATAATTTTTCAACAC ATTCCAACAAGGGACTATCAATGGACAATAATTTTTCAACACATTCCAAC AAGGGACTATCGATGGGCAACAATAATAGAACGCTTGATTGGGCCCTGTG CCTGTCGAGGAAAAGCAAAGACAGGTAGTAAAACTTCGGCTGATTCACTA GGTTAACTGTTGCTAACCTGAAAGAGAATTGCAGCAATAGGTGAACCAGC GCATGAATCCCTTGCACAGCAGTCCGGTCCACCACATGATTAGAGTGTGC TTCCCCCTCCCTCCCGCCACCACCTTCCTTGCAACCTAAACTCATTCCCT TCAGATCCTCGAGAATGTGGCATGGGTTAACAAGAAGCCCTCAGTGATGG AACTGATCGGCCAAGTGAAACACAGCAGGGGTGCTCGCACAGAAGAGGGG AGAGAGGAAGAAGATGCACAATTGCACACGGAGTTGAAGTCAGATGATCC CAATGGTGCAATGCTCCTGATGGAAGGGACAAAATGATCCACTGTTTTTT GTTTTCGAAGCGAAGGAATGAGGGGGGGGGGGGGTACCGTACCATAGGAG AAAAGGGGGGCAAGGCTTTATTTATGGAAATTAGCTACAGAAGATGGCTC GCTGGAGGTTGGAGGTTTTGTTGTGGTGGTTCTCTTTTCTTGTGCTGCCT TGCCTGCACCTTTAGAGCCAGTGCAGCACCTCCCTACAATACTCTTCCCA TTGCAATGCTCTTTCCTCCTTGTCCCTCCCCCCCCCTCCAAAACAAGAAT CCAACAAGAAAAAAAAAATGAAATCAAAAACGAAAATGAATGAAATCTTG AATGTGCAGGCCACGATGGGACCCTCAGCCAGATGGTGGGACAATTCCAG GCAGGGTCAAAGGAAGACGGGGGGCCAGCATCAGCTAGCTCTAAGAAGGT GGTGAATCACTTTGGCAATGGATGCACGGGTGGTGAAGGGGTGGTTCGAG CCCTGACGTTGCAGGAGAGTGGTGGGGAGCAGGTTGATGTGGGGGATGTG CGGGAGCTTTTCCGCACCCCCATCATGCGGCGGGCGACGCTATGCCTTTG GATGGTGTGGTTCTTCATAAACTTCAGGTAGGCGTGAACCACGAAGCTGG CCACAAGAAGACACTTCAGTATACGCTGTGCTTGGGTTTTACTTCTGGTG TTGTTGGCGTTGTGACGGCGATGAGTGCCAAGCAGGATGGACTGCGGGAG AGGACCATTTAGGTGTCCTCTATTAGCGATCATGCCTCACCTTTCTGGTG GAGCGACTGCCTTCCTCTTTGACCGGGGTGTGCGCTTGCTCTGCTGGGTT TTCTACGTTGCAAGAGGGTCAGGATTGGTAAGGCACCGCAATATGGGTTT GTGTGTGTTTGTTTATGTTTCCTCTGAGTGCATCACTGCCGCTAGTTGGC AAGACTGCAACGCATCTGCAGGGAAGAGGTGCAAGTTGCCCCAGCACCCG TGCTGATTGAGACAGCAGGAGTGCTATACAGAGGAAGGGCCAGAATGTCC ACTTCACCCATGCCTGACTTTATTCTCCAAAAGTGACTGCTGTCGATCTG AGGCTCTCAATCGTTCTTCCCCTTTTCCACCACATGCTTACCACCCCTGT GCTTCTAAGGTTTGAAGAAGTTGTCTTTCAACTTAGCTGGAACAATAATT AGAGCTGTGCTGATAAAACTGTGCTGAGGACTGAACCCAGTCACTGCCTG CTTCTCCTCCCCTGTTTTTTTCTCTTTCTGTCTTTTATTTCTCCCTTTCC TGCTCTACCAATCCCTCCACCCTTACGGTGATGATTGACCACCGGAATAT GGGCAAACCAGTTACTTTGGCCTGGTTTTTTTGCTGCCTATGTACTATGG CCGTGAGGGAAACAGTAATGATATGTACCTCCAAACAGGTGCTTCTGGAG CTGCGTTCATGCCAGGTATGAGTTGTAAAGTCAATGCTGGGGTGGATGCT GTCAGTAGACTTTCAATTCTTAGTGATGTGAGGATCGCCAGGCAGAACAT GCCCCAGAGGGTCAAGGCATGGGGTATGTACTCGATATATGCATGGGGTA TGTACTTGGTAACATGTCATGCAAAGCCCTCAAGTCAACAGAGCTCTGGA CCTGGAAGTCTACGGCTGATTCCTAGTGTGGTTTCCTCTTGCAACAAGAG GGCTCGTTTTTCTTTTTGTTCTTTATGTGTGTTCCATGCAGTCATTGTTC GCTTGGATTGGTTGGTGTCTTAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10175:114..4436+

>mRNA_D-mesarthrocarpus_Contig10175.1.1 ID=mRNA_D-mesarthrocarpus_Contig10175.1.1|Name=mRNA_D-mesarthrocarpus_Contig10175.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1104bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10175:114..4436+ (Discosporangium mesarthrocarpum MT17_79)
ATGCTTTTTGGCGCCGTCTTTTTGTCTATCTATGCCGACCGGCAAGGGCG
CCGGGCCGCCTTCATCCTCTCCTTGGTCATCATATTCTTCGGGGCCATTG
CGTCGGCCCTGGCCCCCAACTACTATGCCCTGGTGGCACTGCGGTGTCTG
GTTGGTTTCGGACTTGGGGGCAACCTCCCTGTGGCGTCCTCCCTGGCGGC
AGAGTTTCTACCCACAAACTCCAGGGCTAAAGGCCTGTCGTTCATCACAA
TGTACTGGGGCATGGGAATCATCTCGGCGTCGTTACTGGGGCTGGTGCTG
AGCAGCGTCATCGGAGAAGAACAGCCCATGTGGCGCTGGTTTCTTGGTCT
TGCAGGCCTGCCCAGTGCTGTTCTGGTGGCTGCGTATTTTGTGATCCCAG
AGAGCCCACGGTTCCTTAGCGTCAGGGGACGGCATAAGCAGGCGATGCAG
ATCCTCGAGAATGTGGCATGGGTTAACAAGAAGCCCTCAGTGATGGAACT
GATCGGCCAAAAGGTGGTGAATCACTTTGGCAATGGATGCACGGGTGGTG
AAGGGGTGGTTCGAGCCCTGACGTTGCAGGAGAGTGGTGGGGAGCAGGTT
GATGTGGGGGATGTGCGGGAGCTTTTCCGCACCCCCATCATGCGGCGGGC
GACGCTATGCCTTTGGATGGTGTGGTTCTTCATAAACTTCAGTTACTTTG
GCCTGGTTTTTTTGCTGCCTATGTACTATGGCCGTGAGGGAAACAGTAAT
GATATGTACCTCCAAACAGGTGCTTCTGGAGCTGCGTTCATGCCAGGTAT
GAGTTGTAAAGTCAATGCTGGGGTGGATGCTGTCAGTAGACTTTCAATTC
TTAGTGATGTGAGGATCGCCAGGCAGAACATGCCCCAGAGGGTCAAGGCA
TGGGGTATGTACTCGATATATGCATGGGGTATGTACTTGGTAACATGTCA
TGCAAAGCCCTCAAGTCAACAGAGCTCTGGACCTGGAAGTCTACGGCTGA
TTCCTAGTGTGGTTTCCTCTTGCAACAAGAGGGCTCGTTTTTCTTTTTGT
TCTTTATGTGTGTTCCATGCAGTCATTGTTCGCTTGGATTGGTTGGTGTC
TTAG
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