mRNA_D-mesarthrocarpus_Contig1017.7.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1017.7.1
Unique NamemRNA_D-mesarthrocarpus_Contig1017.7.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1017.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1017contigD-mesarthrocarpus_Contig1017:12202..14165 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1092
Hectar predicted targeting categoryother localisation
Exons3
Cds size993
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789160.26033-CDS-D-mesarthrocarpus_Contig1017:12201..123091680789160.26033-CDS-D-mesarthrocarpus_Contig1017:12201..12309Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1017 12202..12309 -
1680789160.2705598-CDS-D-mesarthrocarpus_Contig1017:12926..136051680789160.2705598-CDS-D-mesarthrocarpus_Contig1017:12926..13605Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1017 12927..13605 -
1680789160.2791305-CDS-D-mesarthrocarpus_Contig1017:13861..140671680789160.2791305-CDS-D-mesarthrocarpus_Contig1017:13861..14067Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1017 13862..14067 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789160.2906294-UTR-D-mesarthrocarpus_Contig1017:14067..141651680789160.2906294-UTR-D-mesarthrocarpus_Contig1017:14067..14165Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1017 14068..14165 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1017.7.1prot_D-mesarthrocarpus_Contig1017.7.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1017 12202..14067 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1017.7.1

>prot_D-mesarthrocarpus_Contig1017.7.1 ID=prot_D-mesarthrocarpus_Contig1017.7.1|Name=mRNA_D-mesarthrocarpus_Contig1017.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=331bp
MTCTIERSPLSSLNKPKPVTDVRDEVFWREDAECQKPVSTDLYNTKDASV
VVAALASSPDDRDVQFEGCDAITRLACGDTGQGSEEKARLLSESGACDLV
LASMSAFPEDDGIQEAACRAVMTLAALSPCSKKHLAKAGVCTRLAEVLDR
FPKDRAMHELVFWAVVNLTADDAQMTRHFGEVGMCPLVVQGMATFPSDGA
LQEVACSAVASLAAYSLKNKEVLGEGRAASHVATALEAFPLDRGIQERAC
WAVVNLAASSPKNSSRLRQAGVCHLVCNALSTFSFDLALQEIGCQAMVNL
STRSPTNARILGECRACQLVCSAMRVFRMDC
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mRNA from alignment at D-mesarthrocarpus_Contig1017:12202..14165-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1017.7.1 ID=mRNA_D-mesarthrocarpus_Contig1017.7.1|Name=mRNA_D-mesarthrocarpus_Contig1017.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1964bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1017:12202..14165- (Discosporangium mesarthrocarpum MT17_79)
ATTGGGGACGTTGCAGGTGAACACCCTACGCACTGAGCCTCCGATTTTCT
TGTCTGGACCACGCCCGGACTAATCGCGGGAAATGCTGTGGACTGAGGAT
GACTTGTACGATAGAACGAAGTCCTCTGTCCAGCTTGAATAAGCCGAAAC
CTGTTACCGACGTTAGAGACGAGGTGTTTTGGCGAGAAGATGCAGAGTGC
CAGAAACCCGTGTCTACAGATCTATACAACACCAAGGACGCCTCCGTGGT
CGTTGCGGCGCTGGCTTCTTCCCCTGATGATAGAGACGTACAATTTGAGG
GGTGGTGAGTCCTCCATGCTATGTGTTGCAACGTGATCCATCGCCATTGC
ACATGGGAATTCCACCCATGTGGCTGTCGGTTTAATCCAAATTGGGCTGG
ATAACAAGGATATATGAACGGAACACTCGATGTTGCTTCTTTGCACCCCT
CATTGATGCAGTTGTCTGTTTTTCCAGCACAGGAATCTCTTTCTAAACCT
GTCCGAAACCTCACTCTGTTTCACCCGTCCTGATGCCCTCATCACTGTAA
AATGCACTAGCGACGCGATCACCCGACTTGCTTGTGGAGATACAGGCCAG
GGCTCCGAAGAGAAAGCGCGTCTCCTGTCTGAGTCGGGCGCATGTGACCT
GGTCTTGGCATCAATGTCCGCTTTCCCAGAAGATGACGGCATCCAGGAGG
CAGCATGCCGTGCGGTGATGACCCTCGCAGCCTTAAGTCCTTGTAGCAAG
AAACACTTGGCCAAAGCTGGTGTCTGCACCCGCCTGGCTGAGGTGCTCGA
CCGCTTTCCTAAGGACCGCGCCATGCACGAACTGGTCTTCTGGGCCGTAG
TCAATCTCACCGCGGACGACGCGCAAATGACCCGACACTTCGGAGAGGTG
GGCATGTGTCCCTTGGTGGTTCAGGGCATGGCAACATTCCCCTCCGACGG
AGCTCTACAGGAAGTCGCTTGCTCTGCGGTAGCCAGCCTGGCCGCTTATA
GCCTCAAGAATAAGGAGGTGCTGGGAGAAGGACGGGCTGCATCCCATGTG
GCGACGGCGCTCGAAGCTTTCCCACTCGACAGGGGGATCCAGGAACGGGC
ATGCTGGGCAGTGGTGAATTTGGCCGCGAGCTCCCCTAAGAATTCGAGCC
GACTGAGGCAGGCGGGGGTATGCCACCTGGTTTGCAACGCCCTATCCACG
TTTTCGTTCGACCTCGCCTTGCAGGAGATCGGGTGCCAGGCAAGATTCTT
GTTAACATGTAGTATCTTCAGCGAATCTTCTGAGCTTCTCTACGTGCCTC
GAGAGCTTTTGTATTGGTGGTGCCTCTCAGATATCCTCAGAGCCCCATGT
CCTGTGTTATCGACACACTCCTGCATCACACTTACACGAAGAGTGAACTT
TGTTGTGTTCAGAAGAATATCACCCCTATGTTGGGGGTGCCTAAACTATG
TGCTCTGAATATTTTAGTTTGGTGTTAGATTTTGTCTTTCACTTCCCCTC
CTTGCTCTGAATGTGTTCGGGATCTTAAATTCCGGAGCGTAAGAAATACG
ACCCTTCTAAACTTCCCCTGTTTCACTGCCCTCAAGACGAAGCTTTCTCT
TTTGCGTGTGTTCAGTAGTTTCGATTTGGGTGTCAAAAGTTCCTACCTTC
CATCTCTGCTTGCTTGAGGTAAGCATTGACCCGGAATTTGAAACCCCAAT
ATGGACTGACCCACCCACATTAATGATCTTGAAACCATGTGCTGGTTTGA
CGGCAAGATGTCTCTCATGCGTAGCTGGCCATCGCCTTCCAATACCCTCT
AACCCCCCCTGAACCCTTAGACACTCTCCCACGATGCTGCTTCTCGCTTC
CTGCAGGCCATGGTGAACCTCTCCACCCGCTCCCCCACCAATGCCCGCAT
CCTGGGCGAATGTCGCGCTTGTCAACTCGTCTGCTCTGCCATGAGAGTCT
TCCGGATGGACTGC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1017:12202..14165-

>mRNA_D-mesarthrocarpus_Contig1017.7.1 ID=mRNA_D-mesarthrocarpus_Contig1017.7.1|Name=mRNA_D-mesarthrocarpus_Contig1017.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=993bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1017:12202..14165- (Discosporangium mesarthrocarpum MT17_79)
ATGACTTGTACGATAGAACGAAGTCCTCTGTCCAGCTTGAATAAGCCGAA
ACCTGTTACCGACGTTAGAGACGAGGTGTTTTGGCGAGAAGATGCAGAGT
GCCAGAAACCCGTGTCTACAGATCTATACAACACCAAGGACGCCTCCGTG
GTCGTTGCGGCGCTGGCTTCTTCCCCTGATGATAGAGACGTACAATTTGA
GGGGTGCGACGCGATCACCCGACTTGCTTGTGGAGATACAGGCCAGGGCT
CCGAAGAGAAAGCGCGTCTCCTGTCTGAGTCGGGCGCATGTGACCTGGTC
TTGGCATCAATGTCCGCTTTCCCAGAAGATGACGGCATCCAGGAGGCAGC
ATGCCGTGCGGTGATGACCCTCGCAGCCTTAAGTCCTTGTAGCAAGAAAC
ACTTGGCCAAAGCTGGTGTCTGCACCCGCCTGGCTGAGGTGCTCGACCGC
TTTCCTAAGGACCGCGCCATGCACGAACTGGTCTTCTGGGCCGTAGTCAA
TCTCACCGCGGACGACGCGCAAATGACCCGACACTTCGGAGAGGTGGGCA
TGTGTCCCTTGGTGGTTCAGGGCATGGCAACATTCCCCTCCGACGGAGCT
CTACAGGAAGTCGCTTGCTCTGCGGTAGCCAGCCTGGCCGCTTATAGCCT
CAAGAATAAGGAGGTGCTGGGAGAAGGACGGGCTGCATCCCATGTGGCGA
CGGCGCTCGAAGCTTTCCCACTCGACAGGGGGATCCAGGAACGGGCATGC
TGGGCAGTGGTGAATTTGGCCGCGAGCTCCCCTAAGAATTCGAGCCGACT
GAGGCAGGCGGGGGTATGCCACCTGGTTTGCAACGCCCTATCCACGTTTT
CGTTCGACCTCGCCTTGCAGGAGATCGGGTGCCAGGCCATGGTGAACCTC
TCCACCCGCTCCCCCACCAATGCCCGCATCCTGGGCGAATGTCGCGCTTG
TCAACTCGTCTGCTCTGCCATGAGAGTCTTCCGGATGGACTGC
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