mRNA_D-mesarthrocarpus_Contig10144.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10144.3.1
Unique NamemRNA_D-mesarthrocarpus_Contig10144.3.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10144.3.1 vs. uniprot
Match: A0A4P9W163_9FUNG (DNA-directed RNA polymerase n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W163_9FUNG)

HSP 1 Score: 217 bits (553), Expect = 2.860e-61
Identity = 144/420 (34.29%), Postives = 209/420 (49.76%), Query Frame = 1
Query:    1 GTWRLHWMGIIASITPEDVSSIEERYLALDSTDV-TLHVDDTNHVINVGTSTRCLIRP---RTVPESLHTPCSGISYDSMLISHLELTANKFTEVIDRSDPEQFVNLLTRMTPYVFHNQPPRPSLALGMSMIDSCSDSSINVTEPGVSLIVIFMNH--------PVNFEDAAIISEAVNKQGLCKH-GHVFHPVPDDTELPATGSKVTSSNSWWRPSTEGTVIGSGVSTDNRRYISALLVEMSPSVGDKWVTPHRQKFVISRILPENDMPTCTCRVTKAVFKPRVILSSSCIFNRTTFGQLYEGFKAAMAVDISSYDPRDPGASLIASCRDDMYDFQRRGLVCQSVDVNYGVCRFWQLSHPVRDKQHYMSKIPRSLRPLRGRLSVEGVSLGEMEVQALMTKGHRNCMKELMDKNDMVIFK 1221
            G W  H  G+I  ++ E V+ +   Y+ +   D  ++ V   + ++++  +  C+++P        S HT       DS L  H   T       I     + F    +RM PY+  NQPPRP +A  M++   C    ++     +S   +  +H          N+EDA I    +N  GL  H G V+HP+ D ++ PATG  V  S +WWRP  E   I    + ++RR + A L      VGDK  T H QKF ISRILP+N+MP C C  T A+F P VI++SS + NR T GQLYE +    AV    ++P D        C   +   + R    Q V  +YG+  FWQL H VRDKQ YMS +P S   +RGRL   GV +GEM++ A+++ G   C+ EL    D+V+ +
Sbjct:  108 GMWIFHCCGVIKLVSAEGVAQMIRAYVTMKGHDSPSMRVFSEHRLVSLAVTPGCIMKPVLNDLTTASSHTVAECNWIDS-LHRHKPSTYTGANLPITILSLQSF-RTFSRMVPYLAFNQPPRPIMASNMAVQAMCQPK-VSAATTRLSDAGLLASHCWYFTRTLHYNYEDAIIAIAKLNDMGLLAHEGFVYHPMMDYSDSPATGQPVPESVTWWRPYDESIPIRQAFTVNSRRAVVAQLNGAGIRVGDKLATHHGQKFTISRILPDNEMPKCVCATTGALFTPHVIVASSSVHNRVTPGQLYESWMGMSAVHRHDFNPIDRW-----HCTTPLMVGKNRWST-QCVSADYGIAHFWQLYHLVRDKQQYMSGVPSSSSAIRGRLRESGVQVGEMDIHAMLSLGLIQCLGELSASADVVVVQ 518          
BLAST of mRNA_D-mesarthrocarpus_Contig10144.3.1 vs. uniprot
Match: I1CVV8_RHIO9 (DNA-directed RNA polymerase n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CVV8_RHIO9)

HSP 1 Score: 214 bits (546), Expect = 4.280e-58
Identity = 145/451 (32.15%), Postives = 215/451 (47.67%), Query Frame = 1
Query:    7 WRLHWMGIIASITPEDVSSIEERYLALDSTDV-TLHVDDTNHVINVGTSTRCLIRPRTVPESLHTPCSGIS-YDSMLISHLELTANKFTEVIDRSDPEQFVNLLTRMTPYVFHNQPPRPSLALGMSMIDSCSD-----SSI--------------------------NVTEPGVSLIVIFMNHPVNFEDAAIISEAVNKQGLCKHGHVF-HPVPDDTELPATGSKVTSSNSWWRPSTEGTVIGSGVSTDNRRYISALLVEMSPSVGDKWVTPHRQKFVISRILPENDMPTCTCRVTKAVFKPRVILSSSCIFNRTTFGQLYEGFKAAMAVDISSYDPRDPGASLIASCRDDMYDFQRRGLVCQ---------------SVDVNYGVCRFWQLSHPVRDKQHYMSKIPRSLRPLRGRLSVEGVSLGEMEVQALMTKGHRNCMKELMDKNDMV 1212
            W L  +G I  I+  DV  +   +L     +  +LHV +   V+ +  +  CL++P  V E L+   S +  YDS+L +   +T     +      P +++     + P+VFH++PPRP LA  MS    C+      S+I                          +V  PGV L+ +F N   N+ED+ I+S+ VN +G+  H  +  HPVP   +    G  + S   WWRP+ +  VI  G S +  RY+ A +     +VGDK  T H QKF +S I P + MPTC    T   FKP +I++SS I NR T GQLYE + A   +    +DP +    ++    D  +    R  +C                 + ++YG+CRFW L+H  RDKQHY+S +PR     RGRL    V LGEMEV  ++  G  + + EL   +DMV
Sbjct:  563 WTLFMLGYIQKISKLDVFEMTATWLTQYGPNAPSLHVFEDKKVVVIAITPGCLMKP--VCEELYKDNSNVKWYDSVLYNDQSMTLFIDPDGDLFYHPMEYMRTFCHLVPFVFHDEPPRPLLAGSMSTQAICNPRVELFSTIKPKHVIPPIVRTPLMNKYVHDLARLPHVDIPGVELLTLFCNSRGNYEDSVIVSQYVNDRGIFAHTSLINHPVPVGVDRLKAGDVIGSETKWWRPAQDAIVIKEGFSKNKTRYVCARMTSNDINVGDKIGTQHGQKFTVSEIRPIDQMPTCFDPKTGKTFKPHIIVASSSIHNRITLGQLYEAYTAMSVIGDVDFDPLNVDDYIVLDT-DGRFPSDIRATMCNIQIGDTRITHPNISDDLYMDYGICRFWLLAHLSRDKQHYLSHVPRGPTIPRGRLHGSSVRLGEMEVHVMLMNGLIHTLSELTMSSDMV 1010          
BLAST of mRNA_D-mesarthrocarpus_Contig10144.3.1 vs. uniprot
Match: F0X1L2_9STRA (DNA-directed RNA polymerase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X1L2_9STRA)

HSP 1 Score: 199 bits (505), Expect = 4.970e-53
Identity = 124/361 (34.35%), Postives = 179/361 (49.58%), Query Frame = 1
Query:  274 IDRSDPEQFVNLLTRMTPYVFHNQPPRPSLALGMSMIDSC---------------------------------SDSSINVTEPGVSLIVIFMNHPVNFEDAAIISEAVNKQGLCK-HGHVFHPVPDDTELPATGSKVTSSNSWWRPSTEGTVIGSGVSTDNRRYISALLVEMSPSVGDKWVTPHRQKFVISRILPENDMPTCTCRVTKAVFKPRVILSSSCIFNRTTFGQLYEGFKAAMAVDISSYDPR--------DP-GASLIASCRDDMYDFQRRGLVCQSVDVNYGVCRFWQLSHPVRDKQHYMSKIPRSLRPLRGRLSVEGVSLGEMEVQALMTKGHRNCMKELMDKNDMVIFKLC 1227
            + R+D       L  + P+   ++PPRP LA  +     C                                 SD  I+V  PGV L+V+F N   N+ED  +IS+  N+ GL K    V+HPV + T     G K+T++++W+RP  + TV+  GVS    RY++A +   S  +GDK  T H QK ++SRI  E+D+P  TC  T A  KP +++++S + NR T GQLYE +     V    +DPR        DP  A  + + R   Y     G        +YG+C FWQLSH  RDKQHY+S++PR L   RG+L   GV  GEME  ++++ G  +C+  L D  D+    LC
Sbjct:  382 LPRNDVRDNTRTLFHLFPFFADDEPPRPGLASSICTQAICKPRVELTSTIASVDTYLPVVRTPLMQQVVEQLPSDRPISV--PGVPLLVVFCNMRYNYEDGVVISKHANELGLFKTRSIVYHPVSEGTAAMRPGDKITAAHTWFRPHCDATVLRQGVSVRLARYVAAEMHSDSLQLGDKLATSHGQKLIVSRIADESDLPVFTCTRTGARVKPHIVVAASSVHNRGTVGQLYEAWAGMECVGDVDFDPRTNRRYCVYDPFDADAVPTKRYSCY-VSEPGADTHVAVADYGICHFWQLSHVSRDKQHYVSEVPRRLSTRRGKLRGAGVRFGEMETLSMLSGGLVHCLSYLSDNGDLADVDLC 739          
BLAST of mRNA_D-mesarthrocarpus_Contig10144.3.1 vs. uniprot
Match: A0A4V1IS41_9FUNG (DNA-directed RNA polymerase (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4V1IS41_9FUNG)

HSP 1 Score: 78.6 bits (192), Expect = 1.900e-13
Identity = 61/223 (27.35%), Postives = 87/223 (39.01%), Query Frame = 1
Query:  319 MTPYVFHNQPPRPSLALGMSMIDSC-------------------------------SDSSINVTEPGVSLIVIFMNHPVNFEDAAIISEAVNKQGLCKHGHVFHPVPDDTELPATGSKVTSSNSWWRPSTEGTVIGSGVSTDNRRYISALLVEMSPSVGDKWVTPHRQKFVISRILPENDMPTCTCRVTKAVFKPRVILSSSCIFNRTTFGQLYEGFKAAMAV 894
            M P +  NQPPRP +A  M++   C                               +  +I  T  G  L+V++ N   N+EDA I++  +N   +  H                               EG + G+G+                  VGDK  T H QKF IS ILP+++MP C C  T+A+F P  I++SS +  R T GQLYE +     V
Sbjct:    4 MVPCLAFNQPPRPIMASNMAVQAMCQPKVSAATTVKPKHTSQPVVRTLLMHSFITTATETIRHTIAGFPLLVLYANMDYNYEDAIIVNAKLNDMAVFAH-------------------------------EGFLNGAGL-----------------RVGDKLETHHGQKFTISSILPDDEMPKCVCATTEALFTPHFIVASSSVHYRVTPGQLYESWMGMSGV 178          
BLAST of mRNA_D-mesarthrocarpus_Contig10144.3.1 vs. uniprot
Match: A0A7J3RBE6_9ARCH (DNA-directed RNA polymerase n=1 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A7J3RBE6_9ARCH)

HSP 1 Score: 70.5 bits (171), Expect = 2.140e-9
Identity = 55/191 (28.80%), Postives = 81/191 (42.41%), Query Frame = 1
Query:  691 PSVGDKWVTPHRQKFVISRILPENDMPTCTCRVTKAVFKPRVILSSSCIFNRTTFGQLYEGFKAAMAVDISSYDPRDP----------GASLIASCRDDMYDFQRRGLVCQSVDVNY--GVCRFWQLSHPVRDKQHYMSKIPRSL---RPLRGRLSVEGVSLGEMEVQALMTKGHRNCMKELMDKNDMVIF 1218
            P VGDKW + H QK V+SRI+PE D+P      T    +P +I S + +  R T   + E            Y    P           A L    RDD  +    G   Q +      G   + +L H V DK    ++ P +L   +P  G+    G+ LGEME +A+M  G    +KE  D +  +++
Sbjct:  354 PEVGDKWSSKHGQKGVLSRIVPEEDIP-----FTSTGIRPDIIFSPNGLPKRMTVSHMIEALAGKFGALAGRYIDGTPFLNEPVKDIREALLSLGFRDDGTEILYDGRTGQRIPARIFVGNIYYMRLKHQVADKIQTRARGPVTLLTRQPTEGKAKEGGLRLGEMEKEAIMAHGASLLLKERFDSDKEIVW 539          
BLAST of mRNA_D-mesarthrocarpus_Contig10144.3.1 vs. uniprot
Match: F4RC27_MELLP (DNA-directed RNA polymerase n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4RC27_MELLP)

HSP 1 Score: 64.3 bits (155), Expect = 5.220e-8
Identity = 52/168 (30.95%), Postives = 75/168 (44.64%), Query Frame = 1
Query:  367 LGMSMIDSCSDSSINVTEPGVSLIVIFMNHPVNFEDAAIISEAVNKQGLCKHGHVFHPVPDDTELPATGSKVTSSNSWWRPSTEGTVIGSGVSTDNRRYISALLVEMSPSVGDKWVTPHRQKFVISRILPENDMPTCTCRVTKAVFKPRVILSSSCIFNRTTFGQLYE 870
            L  S+I+   D+   ++ PGV ++V+F N   N+EDA II E +                             S++ W R     T+  SG                   +GDK+ TPH QKFV+S+IL ++ MP+     T  VFKPRVI++S  I      GQLY+
Sbjct:  122 LMQSIIEKVKDNPY-ISIPGVPMLVVFSNMTYNYEDALIIGEGLK---------------------------LSTSVWERQ--RATMESSGA-----------------RIGDKFGTPHGQKFVLSQILSKDKMPSFQGCKTGEVFKPRVIIASYSIHKCGAMGQLYQ 242          
BLAST of mRNA_D-mesarthrocarpus_Contig10144.3.1 vs. uniprot
Match: K2CYQ2_9BACT (DNA-directed RNA polymerase subunit beta n=5 Tax=Bacteria TaxID=2 RepID=K2CYQ2_9BACT)

HSP 1 Score: 64.7 bits (156), Expect = 1.950e-7
Identity = 64/192 (33.33%), Postives = 88/192 (45.83%), Query Frame = 1
Query:  694 SVGDKWVTPHRQKFVISRILPENDMPTCTCRVTKAVFKPRVILSSSCIFNRTTFGQLYE---GFKAA-----MAVDISSYDPRD------PGASLIASCRDDMYDFQRRGLVCQSVDVNYGVCRFWQLSHPVRDKQHYMSKIPRSL---RPLRGRLSVEGVSLGEMEVQALMTKGHRNCMKELMD-KNDMVI 1215
            + GDK    H  K VIS+I+PE DMP         +     I+SS  + +R   GQL E   GF A      +A  +    P +        A+L  S +  + D +      Q V V Y    F +L H V DK H  S  P SL   +PL G+  + G  LGEMEV AL   G  N ++E++  K+D V+
Sbjct:  837 TAGDKLAGRHGNKGVISKIVPEADMPHLEDGTPVDI-----IISSVTVLSRMNLGQLLEAHLGFAAKKLGYKVAAPVFENLPEEVLIEQLKKANLPVSGKSKLVDGRTGEYFKQDVVVGYAY--FLKLIHMVEDKTHARSTGPYSLVTQQPLGGKAQMGGQRLGEMEVWALEAYGAANVLQEMLTLKSDDVV 1021          
BLAST of mRNA_D-mesarthrocarpus_Contig10144.3.1 vs. uniprot
Match: A0A3R6ZPR2_9BACT (DNA-directed RNA polymerase subunit beta n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A3R6ZPR2_9BACT)

HSP 1 Score: 64.7 bits (156), Expect = 1.950e-7
Identity = 67/193 (34.72%), Postives = 89/193 (46.11%), Query Frame = 1
Query:  694 SVGDKWVTPHRQKFVISRILPENDMPTCTC-RVTKAVFKPRVILSSSCIFNRTTFGQLYE---GFKAA-----MAVDISSYDPRD------PGASLIASCRDDMYDFQRRGLVCQSVDVNYGVCRFWQLSHPVRDKQHYMSKIPRSL---RPLRGRLSVEGVSLGEMEVQALMTKGHRNCMKELMD-KNDMVI 1215
            +VGDK    H  K VISRI+PE DMP      V   +  P  ILS      R   GQL E   GF A      +A  +    P +        A L  + +  + D +      Q  D+  G+  F +L H V DKQH  S  P S+   +PL G+  + G  LGEMEV AL   G  N ++E++  K+D VI
Sbjct:  839 TVGDKLAGRHGNKGVISRIVPEIDMPHLEDGTVVDIIISPVTILS------RMNLGQLLEAHLGFAAEKLGYKVAAPVFERIPEEVIIEELKKAGLPENGKMKLIDGRTGEYFDQ--DIVVGLAYFLKLIHMVEDKQHARSTGPYSMVTQQPLGGKAQMGGQRLGEMEVWALEAYGAANILQEMLTTKSDDVI 1023          
BLAST of mRNA_D-mesarthrocarpus_Contig10144.3.1 vs. uniprot
Match: UPI001AD2B6A0 (Partial DNA-directed RNA polymerase subunit beta n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI001AD2B6A0)

HSP 1 Score: 63.2 bits (152), Expect = 4.620e-7
Identity = 67/210 (31.90%), Postives = 93/210 (44.29%), Query Frame = 1
Query:  616 EGTVIGSGVSTDNRRYISALLVEMSPSVGDKWVTPHRQKFVISRILPENDMPTCTCRVTKAVFKPRVILSSSCIFNRTTFGQLYEGFK--AAMAVDISSYDPRDPGAS------------LIASCRDDMYDFQRRGLVCQSVDVNYGVCRFWQLSHPVRDKQHYMSKIPRSL---RPLRGRLSVEGVSLGEMEVQALMTKGHRNCMKELM 1194
            +G  +  GV+   + Y++   ++    VGDK    H  K VISRILPE DMP             +++L+   + +R   GQ+ E     AA A+ +S   P   GAS            L  S + ++YD        Q V V Y      +LSH V DK H  S  P SL   +PL G+    G   GEMEV AL   G    ++EL+
Sbjct:  336 KGDELAPGVNKTVKVYVA---MKRKLQVGDKMAGRHGNKGVISRILPEEDMPYLPDGTPV-----QIVLNPLGVPSRMNVGQILETHLGWAAQALGLSIASPVFDGASEEEIRALLEKSNLPRSGKTELYDGMTGDRFEQKVTVGY--IYMLKLSHLVDDKIHARSIGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQELL 535          
BLAST of mRNA_D-mesarthrocarpus_Contig10144.3.1 vs. uniprot
Match: A0A3D3T8K4_9FIRM (DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A3D3T8K4_9FIRM)

HSP 1 Score: 63.2 bits (152), Expect = 6.160e-7
Identity = 67/214 (31.31%), Postives = 95/214 (44.39%), Query Frame = 1
Query:  616 EGTVIGSGVSTDNRRYISALLVEMSPSVGDKWVTPHRQKFVISRILPENDMPTCTCRVTKAVFKPR-----VILSSSCIFNRTTFGQLYE----------GFKAAMAVDISSYDPRDPGASL-IASCRDDMYDFQRRGLVCQSVD--VNYGVCRFWQLSHPVRDKQHYMSKIPRSL---RPLRGRLSVEGVSLGEMEVQALMTKGHRNCMKELM 1194
            EG  +  GV+   R YI+    +   SVGDK    H  K V+SRILP+ DMP          F P      ++L+   + +R   GQ+ E          G+K A  +  +  D +D   +L +A  R+D   +   G   +  D  V  G   F +L H V DK H  S  P SL   +PL G+    G   GEMEV AL   G    ++E++
Sbjct:  942 EGAELAPGVNQVVRVYIAQ---KRKISVGDKMAGRHGNKGVVSRILPQEDMP----------FLPDGTPLDIVLNPLGVPSRMNIGQVLEVHLGYAAQALGWKVATPI-FNGADEQDIADTLKLAGLREDGKSWLYDGRTGERFDNPVTVGYVYFLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEIL 1141          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10144.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4P9W163_9FUNG2.860e-6134.29DNA-directed RNA polymerase n=1 Tax=Blyttiomyces h... [more]
I1CVV8_RHIO94.280e-5832.15DNA-directed RNA polymerase n=1 Tax=Rhizopus delem... [more]
F0X1L2_9STRA4.970e-5334.35DNA-directed RNA polymerase n=1 Tax=Albugo laibach... [more]
A0A4V1IS41_9FUNG1.900e-1327.35DNA-directed RNA polymerase (Fragment) n=1 Tax=Bly... [more]
A0A7J3RBE6_9ARCH2.140e-928.80DNA-directed RNA polymerase n=1 Tax=Candidatus Woe... [more]
F4RC27_MELLP5.220e-830.95DNA-directed RNA polymerase n=1 Tax=Melampsora lar... [more]
K2CYQ2_9BACT1.950e-733.33DNA-directed RNA polymerase subunit beta n=5 Tax=B... [more]
A0A3R6ZPR2_9BACT1.950e-734.72DNA-directed RNA polymerase subunit beta n=1 Tax=A... [more]
UPI001AD2B6A04.620e-731.90Partial DNA-directed RNA polymerase subunit beta n... [more]
A0A3D3T8K4_9FIRM6.160e-731.31DNA-directed RNA polymerase subunit beta n=1 Tax=C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10144contigD-mesarthrocarpus_Contig10144:1594..2973 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog936053.I1CVV8
Model size1236
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.47e-57
EggNOG OGsCOG0417@1|root,KOG0969@2759|Eukaryota,3ANXH@33154|Opisthokonta,3PEZY@4751|Fungi
DescriptionDNA replication proofreading
Cds size1215
COG categoryL
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789158.4114785-UTR-D-mesarthrocarpus_Contig10144:1593..16141680789158.4114785-UTR-D-mesarthrocarpus_Contig10144:1593..1614Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10144 1594..1614 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789158.4276304-CDS-D-mesarthrocarpus_Contig10144:1614..19711680789158.4276304-CDS-D-mesarthrocarpus_Contig10144:1614..1971Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10144 1615..1971 +
1680789158.440278-CDS-D-mesarthrocarpus_Contig10144:2067..26771680789158.440278-CDS-D-mesarthrocarpus_Contig10144:2067..2677Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10144 2068..2677 +
1680789158.4510431-CDS-D-mesarthrocarpus_Contig10144:2725..29731680789158.4510431-CDS-D-mesarthrocarpus_Contig10144:2725..2973Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10144 2726..2973 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10144.3.1prot_D-mesarthrocarpus_Contig10144.3.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10144 1615..2973 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10144.3.1

>prot_D-mesarthrocarpus_Contig10144.3.1 ID=prot_D-mesarthrocarpus_Contig10144.3.1|Name=mRNA_D-mesarthrocarpus_Contig10144.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=405bp
MGIIASITPEDVSSIEERYLALDSTDVTLHVDDTNHVINVGTSTRCLIRP
RTVPESLHTPCSGISYDSMLISHLELTANKFTEVIDRSDPEQFVNLLTRM
TPYVFHNQPPRPSLALGMSMIDSCSDSSINVTEPGVSLIVIFMNHPVNFE
DAAIISEAVNKQGLCKHGHVFHPVPDDTELPATGSKVTSSNSWWRPSTEG
TVIGSGVSTDNRRYISALLVEMSPSVGDKWVTPHRQKFVISRILPENDMP
TCTCRVTKAVFKPRVILSSSCIFNRTTFGQLYEGFKAAMAVDISSYDPRD
PGASLIASCRDDMYDFQRRGLVCQSVDVNYGVCRFWQLSHPVRDKQHYMS
KIPRSLRPLRGRLSVEGVSLGEMEVQALMTKGHRNCMKELMDKNDMVIFK
LCPT*
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mRNA from alignment at D-mesarthrocarpus_Contig10144:1594..2973+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10144.3.1 ID=mRNA_D-mesarthrocarpus_Contig10144.3.1|Name=mRNA_D-mesarthrocarpus_Contig10144.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1380bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10144:1594..2973+ (Discosporangium mesarthrocarpum MT17_79)
GGTACCTGGAGACTCCACTGGATGGGTATCATAGCCTCCATAACACCTGA GGATGTCAGCAGCATAGAGGAAAGGTACCTGGCATTGGACTCGACGGATG TCACACTCCACGTAGATGACACCAACCACGTCATAAACGTGGGCACGTCA ACCAGGTGCCTCATAAGGCCAAGGACCGTTCCTGAGAGTCTTCACACTCC ATGCTCGGGGATTTCCTACGACTCAATGCTCATATCGCATCTTGAGCTCA CGGCGAACAAATTCACAGAGGTCATTGACAGGTCAGACCCAGAGCAGTTC GTGAATCTCCTCACGAGGATGACCCCTTATGTATTCCACAATCAACCTCC AAGGCCGTCACTTGCCCTCGGAATGTCGGTCCAGGCTCTACGCTGACCAT TCATGGAGGGACAATGCACCTGCTTCCCATCAGAAAGCTACCCTTCTTTG GGGACAAGCAGGCTGGGCAGAGAGATGATCGACTCATGCAGTGACTCATC AATCAACGTGACGGAACCTGGTGTATCGCTCATTGTCATATTCATGAACC ACCCGGTTAACTTCGAAGACGCAGCGATCATATCGGAGGCCGTAAACAAG CAGGGACTTTGCAAGCACGGACACGTGTTTCATCCTGTCCCAGATGATAC CGAGCTCCCTGCCACAGGTTCTAAGGTAACTTCATCAAATTCATGGTGGA GGCCTTCGACAGAGGGCACAGTCATAGGATCAGGGGTCTCGACGGACAAC AGGAGGTACATTTCTGCCCTCCTCGTTGAGATGAGTCCATCAGTGGGTGA CAAGTGGGTAACCCCTCATAGACAGAAGTTCGTTATATCACGCATCTTAC CCGAGAACGACATGCCTACGTGCACTTGTAGGGTCACCAAGGCAGTGTTC AAGCCCCGTGTCATATTATCAAGTTCATGTATATTCAACAGGACAACGTT CGGGCAGCTGTATGAAGGCTTCAAGGCAGCCATGGCGGTCGACATCTCAT CGTATGACCCGAGAGATCCTGGGGCATCACTAATCGCATCCTGCAGAGAT GACATGTACGACTTCCAACGAAGAGGCCTTGTCTGTAACGCGTCGGTACC GGACTCACATGAGAACTGAAAGGATGCCTCAGGTCAGTCTGTCGATGTCA ACTATGGTGTATGCAGGTTCTGGCAGCTGTCACACCCCGTCAGGGACAAA CAGCATTACATGTCCAAGATTCCTCGTTCATTGAGACCCCTGAGAGGCAG GTTAAGCGTCGAGGGAGTCAGTTTAGGTGAGATGGAGGTACAGGCGCTCA TGACGAAGGGCCACAGAAACTGCATGAAGGAGTTGATGGACAAGAACGAT ATGGTTATCTTCAAGCTCTGTCCTACGTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10144:1594..2973+

>mRNA_D-mesarthrocarpus_Contig10144.3.1 ID=mRNA_D-mesarthrocarpus_Contig10144.3.1|Name=mRNA_D-mesarthrocarpus_Contig10144.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1215bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10144:1594..2973+ (Discosporangium mesarthrocarpum MT17_79)
ATGGGTATCATAGCCTCCATAACACCTGAGGATGTCAGCAGCATAGAGGA
AAGGTACCTGGCATTGGACTCGACGGATGTCACACTCCACGTAGATGACA
CCAACCACGTCATAAACGTGGGCACGTCAACCAGGTGCCTCATAAGGCCA
AGGACCGTTCCTGAGAGTCTTCACACTCCATGCTCGGGGATTTCCTACGA
CTCAATGCTCATATCGCATCTTGAGCTCACGGCGAACAAATTCACAGAGG
TCATTGACAGGTCAGACCCAGAGCAGTTCGTGAATCTCCTCACGAGGATG
ACCCCTTATGTATTCCACAATCAACCTCCAAGGCCGTCACTTGCCCTCGG
AATGTCGATGATCGACTCATGCAGTGACTCATCAATCAACGTGACGGAAC
CTGGTGTATCGCTCATTGTCATATTCATGAACCACCCGGTTAACTTCGAA
GACGCAGCGATCATATCGGAGGCCGTAAACAAGCAGGGACTTTGCAAGCA
CGGACACGTGTTTCATCCTGTCCCAGATGATACCGAGCTCCCTGCCACAG
GTTCTAAGGTAACTTCATCAAATTCATGGTGGAGGCCTTCGACAGAGGGC
ACAGTCATAGGATCAGGGGTCTCGACGGACAACAGGAGGTACATTTCTGC
CCTCCTCGTTGAGATGAGTCCATCAGTGGGTGACAAGTGGGTAACCCCTC
ATAGACAGAAGTTCGTTATATCACGCATCTTACCCGAGAACGACATGCCT
ACGTGCACTTGTAGGGTCACCAAGGCAGTGTTCAAGCCCCGTGTCATATT
ATCAAGTTCATGTATATTCAACAGGACAACGTTCGGGCAGCTGTATGAAG
GCTTCAAGGCAGCCATGGCGGTCGACATCTCATCGTATGACCCGAGAGAT
CCTGGGGCATCACTAATCGCATCCTGCAGAGATGACATGTACGACTTCCA
ACGAAGAGGCCTTGTCTGTCAGTCTGTCGATGTCAACTATGGTGTATGCA
GGTTCTGGCAGCTGTCACACCCCGTCAGGGACAAACAGCATTACATGTCC
AAGATTCCTCGTTCATTGAGACCCCTGAGAGGCAGGTTAAGCGTCGAGGG
AGTCAGTTTAGGTGAGATGGAGGTACAGGCGCTCATGACGAAGGGCCACA
GAAACTGCATGAAGGAGTTGATGGACAAGAACGATATGGTTATCTTCAAG
CTCTGTCCTACGTGA
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