prot_D-mesarthrocarpus_Contig10144.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10144.1.1
Unique Nameprot_D-mesarthrocarpus_Contig10144.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length137
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10144.1.1 vs. uniprot
Match: A0A5K3FYK6_MESCO (DNA-directed DNA polymerase n=1 Tax=Mesocestoides corti TaxID=53468 RepID=A0A5K3FYK6_MESCO)

HSP 1 Score: 51.6 bits (122), Expect = 6.650e-5
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 0 
Query:   18 PTPSSSGT--YTGATVFEPVTGLFDE-IKAYDFASFYPSIILCANV 60
            PT  S+G   YTGATVFEPV G +DE I   DF+SFYPSII+  N+
Sbjct:  376 PTVKSNGRDEYTGATVFEPVCGFYDEPIITLDFSSFYPSIIIAHNL 421
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BLAST of mRNA_D-mesarthrocarpus_Contig10144.1.1 vs. uniprot
Match: A0A5K3FTS7_MESCO (DNA-directed DNA polymerase n=4 Tax=Mesocestoides corti TaxID=53468 RepID=A0A5K3FTS7_MESCO)

HSP 1 Score: 51.6 bits (122), Expect = 6.860e-5
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 0 
Query:   18 PTPSSSGT--YTGATVFEPVTGLFDE-IKAYDFASFYPSIILCANV 60
            PT  S+G   YTGATVFEPV G +DE I   DF+SFYPSII+  N+
Sbjct:  539 PTVKSNGRDEYTGATVFEPVCGFYDEPIITLDFSSFYPSIIIAHNL 584
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BLAST of mRNA_D-mesarthrocarpus_Contig10144.1.1 vs. uniprot
Match: A0A6C0JKJ5_9ZZZZ (DNA-directed DNA polymerase n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JKJ5_9ZZZZ)

HSP 1 Score: 51.6 bits (122), Expect = 7.020e-5
Identity = 21/41 (51.22%), Postives = 28/41 (68.29%), Query Frame = 0 
Query:   20 PSSSGTYTGATVFEPVTGLFDEIKAYDFASFYPSIILCANV 60
            P     Y GATVFEPV G++D++  +DFAS YPS I+  N+
Sbjct:  485 PKDDDHYVGATVFEPVAGVYDKVLPFDFASLYPSTIIAYNI 525
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BLAST of mRNA_D-mesarthrocarpus_Contig10144.1.1 vs. uniprot
Match: A0A0R3U9G7_MESCO (DNA-directed DNA polymerase n=3 Tax=Mesocestoides corti TaxID=53468 RepID=A0A0R3U9G7_MESCO)

HSP 1 Score: 51.6 bits (122), Expect = 7.030e-5
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 0 
Query:   18 PTPSSSGT--YTGATVFEPVTGLFDE-IKAYDFASFYPSIILCANV 60
            PT  S+G   YTGATVFEPV G +DE I   DF+SFYPSII+  N+
Sbjct:  539 PTVKSNGRDEYTGATVFEPVCGFYDEPIITLDFSSFYPSIIIAHNL 584
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10144.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A5K3FYK6_MESCO6.650e-560.87DNA-directed DNA polymerase n=1 Tax=Mesocestoides ... [more]
A0A5K3FTS7_MESCO6.860e-560.87DNA-directed DNA polymerase n=4 Tax=Mesocestoides ... [more]
A0A6C0JKJ5_9ZZZZ7.020e-551.22DNA-directed DNA polymerase n=1 Tax=viral metageno... [more]
A0A0R3U9G7_MESCO7.030e-560.87DNA-directed DNA polymerase n=3 Tax=Mesocestoides ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023211DNA polymerase, palm domain superfamilyGENE3D3.90.1600.10Palm domain of DNA polymerasecoord: 25..103
e-value: 1.6E-10
score: 42.9
IPR006134DNA-directed DNA polymerase, family B, multifunctional domainPFAMPF00136DNA_pol_Bcoord: 23..83
e-value: 3.4E-10
score: 39.2
NoneNo IPR availableGENE3D1.10.287.690Helix hairpin bincoord: 104..123
e-value: 1.6E-10
score: 42.9
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 24..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10144contigD-mesarthrocarpus_Contig10144:256..666 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10144.1.1mRNA_D-mesarthrocarpus_Contig10144.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10144 250..666 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10144.1.1 ID=prot_D-mesarthrocarpus_Contig10144.1.1|Name=mRNA_D-mesarthrocarpus_Contig10144.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=137bp
MSLMSFQYSRGKVIDWTPTPSSSGTYTGATVFEPVTGLFDEIKAYDFASF
YPSIILCANVSKEIPISSTSVLSSTRDGIVDWSTNNVSVGIEEHVDVYDL
SVDNVTKNTMQELINIRMKVGKKTPQGWALHSNPSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023211DNA_pol_palm_dom_sf
IPR006134DNA-dir_DNA_pol_B_multi_dom
IPR043502DNA/RNA_pol_sf