mRNA_D-mesarthrocarpus_Contig10138.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10138.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10138.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A2D8PV15_9PROT (ATP synthase subunit a n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PV15_9PROT)

HSP 1 Score: 437 bits (1123), Expect = 6.200e-154
Identity = 221/249 (88.76%), Postives = 238/249 (95.58%), Query Frame = 1
Query:    1 LATDTHGGEQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747
            +ATDTHGGE+HSPLEQFEIKEL+PIEIGGN ++FTNSALMMVIAV LI++LM++GTRK+AMIPGRWQ+ AE+ YEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGM PYSFTFTSHIAVTFAMA+VVF+GVT LGFAKHG+ FFS FVPPGVP WMWPLMIPIEVISYLSRP SLAMRLFANMLAGHTLLKVFAGF+PALGAAG+LPLAFVGALTGLE LIAFLQAYVFAILTCLYINDALHLH
Sbjct:    1 MATDTHGGEKHSPLEQFEIKELIPIEIGGNDISFTNSALMMVIAVALIVLLMVVGTRKQAMIPGRWQAIAEMFYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMVPYSFTFTSHIAVTFAMAMVVFLGVTXLGFAKHGLHFFSXFVPPGVPXWMWPLMIPIEVISYLSRPXSLAMRLFANMLAGHTLLKVFAGFVPALGAAGILPLAFVGALTGLEMLIAFLQAYVFAILTCLYINDALHLH 249          
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A520P0B3_9PROT (ATP synthase subunit a n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520P0B3_9PROT)

HSP 1 Score: 426 bits (1096), Expect = 8.070e-150
Identity = 214/249 (85.94%), Postives = 231/249 (92.77%), Query Frame = 1
Query:    1 LATDTHGGEQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747
            +ATDTHGGE+HSPLEQFEIKELVPIEI GN ++FTNSALMMVI + LI +LM+ GTRKRAMIPGRWQ  AE+CYEFVA LIRDTVGNEGRKYFPFIF+LFMFILFGNMLGM PYSFTFTSHIAVTFAMA+VVF+GVTILGFAKHG+ FFS FVPPGVP+WMWPL+IPIE+ISYLSRP+SLAMRLFANMLAGHTLLKVFAGF+P LGAAGVLPLAFV  LT LE LIAFLQAYVF ILTCLYINDALHLH
Sbjct:    1 MATDTHGGEKHSPLEQFEIKELVPIEIAGNDISFTNSALMMVITIALICLLMLAGTRKRAMIPGRWQVVAEVCYEFVAGLIRDTVGNEGRKYFPFIFSLFMFILFGNMLGMVPYSFTFTSHIAVTFAMAMVVFVGVTILGFAKHGVHFFSLFVPPGVPIWMWPLLIPIEIISYLSRPISLAMRLFANMLAGHTLLKVFAGFVPVLGAAGVLPLAFVVPLTALELLIAFLQAYVFTILTCLYINDALHLH 249          
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A2S6Q9F3_9PROT (ATP synthase subunit a n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6Q9F3_9PROT)

HSP 1 Score: 417 bits (1073), Expect = 2.580e-146
Identity = 209/249 (83.94%), Postives = 230/249 (92.37%), Query Frame = 1
Query:    1 LATDTHGGEQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747
            +A +T+G E+HSPLEQFEIKEL+PIE+ GN ++FTNSALMMVIAV LI +LM+ GTR+RA+IP RWQ  AE+CYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGM PYSFTFTSHIAVTFAMA+VVF GVTILG +KHG+ FF+ FVPPGVP+WMWPLMIPIE+ISYLSRP+SLAMRLFANMLAGHTLLKVFAGF+P LGAAGVLPLAFVGALT LE LIAFLQAYVF ILTCLYINDALHLH
Sbjct:    1 MANNTNGAEKHSPLEQFEIKELIPIEVAGNDISFTNSALMMVIAVALICLLMLAGTRRRAIIPSRWQMVAEICYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMVPYSFTFTSHIAVTFAMAMVVFTGVTILGLSKHGMHFFTLFVPPGVPMWMWPLMIPIEIISYLSRPISLAMRLFANMLAGHTLLKVFAGFVPLLGAAGVLPLAFVGALTALELLIAFLQAYVFTILTCLYINDALHLH 249          
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A2D8G7A8_9PROT (ATP synthase subunit a n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G7A8_9PROT)

HSP 1 Score: 408 bits (1049), Expect = 1.050e-142
Identity = 206/242 (85.12%), Postives = 222/242 (91.74%), Query Frame = 1
Query:   22 GEQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747
            GE+HSPLEQFEIKEL+PI IGG   +FTNSALMMV+ V LI  LM++GTR+RAMIPGRWQ  AE+CY+FVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGM PYSFTFTSHIAVTFAMA+VVF GVT+LG AKHGI FFS FVPPGVP+WMWPLMIPIE+ISYLSRP+SLAMRLFANMLAGHTLLKVFAGF+P LGAAG+ PLAFVGALT LE LIAFLQAYVF ILTCLYINDALHLH
Sbjct:    5 GEKHSPLEQFEIKELIPINIGGTDXSFTNSALMMVVTVALICXLMLVGTRRRAMIPGRWQVVAEMCYQFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMLPYSFTFTSHIAVTFAMAMVVFTGVTLLGXAKHGIHFFSXFVPPGVPIWMWPLMIPIEIISYLSRPISLAMRLFANMLAGHTLLKVFAGFVPLLGAAGIXPLAFVGALTALELLIAFLQAYVFTILTCLYINDALHLH 246          
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A3M1M6J6_9PROT (ATP synthase subunit a n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1M6J6_9PROT)

HSP 1 Score: 369 bits (946), Expect = 5.650e-127
Identity = 189/244 (77.46%), Postives = 213/244 (87.30%), Query Frame = 1
Query:   16 HGGEQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747
            HGG  HSPL QFEIKE+VP+++GG  ++FTNS+LMMVIAV L     ++G R+ A++PGRWQSAAEL YEFVA L RDTVG+EGR+YFP +FTLFMFIL GN+LGM PYSFTFTSHI VTFAMA VVF+GVTILGFAKHG+ FFSFFVPPG P+WMWPL+IPIE+ISYLSRP+SL++RLFANMLAGHTLLKV AGFI  LG AGVLPLA V ALTGLE LIAFLQAYVF ILTCLYINDALHLH
Sbjct:    7 HGG-GHSPLVQFEIKEIVPLKLGGIDISFTNSSLMMVIAVALTAGFFLIGMRRGALVPGRWQSAAELTYEFVAGLFRDTVGHEGRRYFPAVFTLFMFILVGNLLGMVPYSFTFTSHIIVTFAMAAVVFVGVTILGFAKHGLHFFSFFVPPGSPVWMWPLLIPIEIISYLSRPISLSVRLFANMLAGHTLLKVIAGFIAMLGVAGVLPLALVVALTGLEILIAFLQAYVFTILTCLYINDALHLH 249          
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A2E5PJC7_9PROT (ATP synthase subunit a n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5PJC7_9PROT)

HSP 1 Score: 360 bits (923), Expect = 1.350e-123
Identity = 182/238 (76.47%), Postives = 207/238 (86.97%), Query Frame = 1
Query:   34 SPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747
            SPLEQFEIK L+P+ +GG  ++F NS+L MV    LI+  MMLGTR RA++P R+Q A EL YEF+ANL+RDTVGNEGRKYFPFIFTLFMF+LFGN+LGM PYSFTFTSHI VTFA+A+V+FIGVTILGFAKHG  FFSFF+PPG PL MWPL+IPIEVISYLSRP+SL++RLFANMLAGHTLLKV AGF+ ALG  G++P AFV  LTGLE LIAFLQAYVFAILTCLYINDALHLH
Sbjct:    4 SPLEQFEIKTLIPLNLGGVDVSFANSSLYMVATFVLIVAFMMLGTRHRALVPNRFQCAVELSYEFIANLLRDTVGNEGRKYFPFIFTLFMFVLFGNLLGMTPYSFTFTSHIVVTFALAIVIFIGVTILGFAKHGFHFFSFFLPPGTPLPMWPLLIPIEVISYLSRPISLSVRLFANMLAGHTLLKVIAGFVAALGVFGIVPFAFVVVLTGLEILIAFLQAYVFAILTCLYINDALHLH 241          
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A8J7N4U9_9PROT (ATP synthase subunit a n=1 Tax=Candidatus Odyssella sp. TaxID=2589116 RepID=A0A8J7N4U9_9PROT)

HSP 1 Score: 359 bits (922), Expect = 2.130e-123
Identity = 185/243 (76.13%), Postives = 209/243 (86.01%), Query Frame = 1
Query:   19 GGEQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747
              E+HSPLEQF IK L+PI+IGG  L+FTNSAL MV+AV L+ +LM  G  KR ++PGR QS AE+ YEFVANLI++TVG EGRKYFP IFTLFMFIL GNM+GM P +FTFTSHIAVTFAMA VVF+ VTILGF KHG  FFS FVPPGVP+ MWPL+IPIE+ISY SRP+SL++RLFANMLAGHTLLKV AGF+PALG AG++PLAFV ALTGLE LIAFLQAYVFAILTCLYINDALHLH
Sbjct:    2 AAEKHSPLEQFLIKPLIPIKIGGVDLSFTNSALFMVVAVVLVALLMTAGMGKRGLVPGRIQSIAEMAYEFVANLIKETVGAEGRKYFPLIFTLFMFILVGNMIGMIPSTFTFTSHIAVTFAMAAVVFVAVTILGFVKHGAHFFSLFVPPGVPIAMWPLLIPIEIISYFSRPISLSVRLFANMLAGHTLLKVLAGFVPALGVAGIIPLAFVTALTGLEILIAFLQAYVFAILTCLYINDALHLH 244          
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A6N9BFX9_9PROT (ATP synthase subunit a n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N9BFX9_9PROT)

HSP 1 Score: 358 bits (919), Expect = 1.370e-122
Identity = 180/243 (74.07%), Postives = 209/243 (86.01%), Query Frame = 1
Query:   19 GGEQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747
             G+ H PLEQF I+ELV I + G  L  TNS + M +A   ++ +M+ GTR+RA++PGR QS AEL YEF+A ++RDTVG+EGRKYFP IFTLFMFILFGN+ GM PYSFTFTSHIAVTFAMA VVF+GVT+LGF KHG+ FFSFFVPPGV + MWPL+IPIE+ISYLSRP+SL++RLFANMLAGHTLLKVFAGF+PALG AG+LPLAFV ALTGLE +IAFLQAYVFAILTCLYINDALHLH
Sbjct:   25 AGDAHGPLEQFRIRELVDIPVAGVDLDITNSTVWMAVAAAGVIAVMVGGTRRRALVPGRLQSIAELAYEFIAGMVRDTVGDEGRKYFPLIFTLFMFILFGNLAGMIPYSFTFTSHIAVTFAMAAVVFVGVTVLGFIKHGLHFFSFFVPPGVSILMWPLLIPIEIISYLSRPISLSVRLFANMLAGHTLLKVFAGFVPALGVAGILPLAFVSALTGLEIVIAFLQAYVFAILTCLYINDALHLH 267          
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A7X2FT70_9PROT (ATP synthase subunit a n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2FT70_9PROT)

HSP 1 Score: 352 bits (904), Expect = 1.130e-120
Identity = 181/241 (75.10%), Postives = 208/241 (86.31%), Query Frame = 1
Query:   25 EQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747
            E HSPL QFEIK LVPI++G    +FTNS+  MVI+V L  + ++ G RK  M+PGRWQS AEL Y FVANLIRDTVG EG KYFPFIF+LFMFILFGN+LGM PYSFTFTSHIAVTFAMALVVF+GVT++  AKHG+ FFSFF+PPGVP+ M PL++PIE+ISYLSRP+SL++RLFANM AGHTLLKVFAGF+ +LG AGVLPLAFV ALTGLEF+IAFLQAYVF ILTCLY+NDALHLH
Sbjct:    3 ENHSPLAQFEIKTLVPIDLGSFDASFTNSSAFMVISVLLATVFLVGGMRKGEMVPGRWQSMAELSYVFVANLIRDTVGTEGAKYFPFIFSLFMFILFGNLLGMMPYSFTFTSHIAVTFAMALVVFVGVTVIAVAKHGLHFFSFFMPPGVPIAMAPLLVPIEIISYLSRPISLSVRLFANMTAGHTLLKVFAGFVASLGVAGVLPLAFVTALTGLEFVIAFLQAYVFTILTCLYLNDALHLH 243          
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A2E6GQU6_9PROT (ATP synthase subunit a n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GQU6_9PROT)

HSP 1 Score: 350 bits (897), Expect = 1.510e-119
Identity = 179/246 (72.76%), Postives = 211/246 (85.77%), Query Frame = 1
Query:   13 THGGEQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAA-GVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747
            T   E HSPL QFEIK L+P+++G   ++FTNSAL M + + L+ + ++LG R+RA++PGRWQS AEL YEFVAN++RD VGN+GRKYFPF+F+LFMFILFGNMLGM PYSFTFTSHI VTFA+A VVFIGVT+LGF KHG  FFSFFVPPGV + +WPL+IPIE+ISYLSRPVSL++RLFANMLAGHTLLKVFAGFI +LG   G +PLAFV AL+GLE LIAFLQAYVF ILTCLYINDALH+H
Sbjct:    2 TLAAEGHSPLAQFEIKTLIPLKMGEIDVSFTNSALFMTLTLVLVTLFLVLGMRQRALVPGRWQSMAELSYEFVANMLRDNVGNDGRKYFPFVFSLFMFILFGNMLGMIPYSFTFTSHIIVTFALAAVVFIGVTVLGFVKHGFHFFSFFVPPGVSVALWPLLIPIEIISYLSRPVSLSVRLFANMLAGHTLLKVFAGFIISLGIYFGWVPLAFVVALSGLEILIAFLQAYVFTILTCLYINDALHMH 247          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8PV15_9PROT6.200e-15488.76ATP synthase subunit a n=1 Tax=Rhodospirillaceae b... [more]
A0A520P0B3_9PROT8.070e-15085.94ATP synthase subunit a n=1 Tax=Rhodospirillaceae b... [more]
A0A2S6Q9F3_9PROT2.580e-14683.94ATP synthase subunit a n=2 Tax=Alphaproteobacteria... [more]
A0A2D8G7A8_9PROT1.050e-14285.12ATP synthase subunit a n=1 Tax=Alphaproteobacteria... [more]
A0A3M1M6J6_9PROT5.650e-12777.46ATP synthase subunit a n=1 Tax=Alphaproteobacteria... [more]
A0A2E5PJC7_9PROT1.350e-12376.47ATP synthase subunit a n=1 Tax=Rhodospirillaceae b... [more]
A0A8J7N4U9_9PROT2.130e-12376.13ATP synthase subunit a n=1 Tax=Candidatus Odyssell... [more]
A0A6N9BFX9_9PROT1.370e-12274.07ATP synthase subunit a n=2 Tax=Alphaproteobacteria... [more]
A0A7X2FT70_9PROT1.130e-12075.10ATP synthase subunit a n=1 Tax=Alphaproteobacteria... [more]
A0A2E6GQU6_9PROT1.510e-11972.76ATP synthase subunit a n=1 Tax=Rhodospirillaceae b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10138contigD-mesarthrocarpus_Contig10138:1480..2229 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1110502.TMO_2779
Preferred nameatpB
PFAMsATP-synt_A
Model size750
Max annot lvl204441|Rhodospirillales
KEGG koko:K02108
KEGG TC3.A.2.1
KEGG Pathwayko00190,ko00195,ko01100,map00190,map00195,map01100
KEGG ModuleM00157
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.36e-110
EggNOG OGsCOG0356@1|root,COG0356@2|Bacteria,1MV87@1224|Proteobacteria,2TRNV@28211|Alphaproteobacteria,2JPBN@204441|Rhodospirillales
Descriptionit plays a direct role in the translocation of protons across the membrane
Cds size750
COG categoryC
BRITEko00000,ko00001,ko00002,ko00194,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789158.0573857-CDS-D-mesarthrocarpus_Contig10138:1479..22291680789158.0573857-CDS-D-mesarthrocarpus_Contig10138:1479..2229Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10138 1480..2229 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10138.1.1prot_D-mesarthrocarpus_Contig10138.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10138 1480..2229 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10138.1.1

>prot_D-mesarthrocarpus_Contig10138.1.1 ID=prot_D-mesarthrocarpus_Contig10138.1.1|Name=mRNA_D-mesarthrocarpus_Contig10138.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=250bp
LATDTHGGEQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILM
LMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLF
MFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFS
FFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAG
FIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH*
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mRNA from alignment at D-mesarthrocarpus_Contig10138:1480..2229-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10138.1.1 ID=mRNA_D-mesarthrocarpus_Contig10138.1.1|Name=mRNA_D-mesarthrocarpus_Contig10138.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=750bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10138:1480..2229- (Discosporangium mesarthrocarpum MT17_79)
TTGGCTACTGATACACACGGCGGAGAACAACACAGCCCGCTGGAACAGTT CGAGATCAAAGAACTGGTGCCGATTGAAATCGGCGGCAACAGTCTCGCCT TTACCAATTCAGCACTGATGATGGTGATCGCGGTAACGCTGATCCTGATG CTGATGATGCTGGGGACACGCAAACGCGCGATGATACCGGGGCGCTGGCA GTCCGCGGCTGAGCTCTGTTACGAATTCGTCGCCAACCTGATCCGCGATA CCGTCGGAAATGAAGGCCGAAAGTACTTCCCGTTCATCTTCACGCTGTTC ATGTTCATCCTGTTCGGCAACATGCTGGGCATGGCGCCTTACAGCTTCAC ATTCACCAGCCATATCGCGGTGACGTTCGCGATGGCCTTGGTGGTGTTTA TCGGGGTGACGATCCTCGGCTTCGCCAAGCACGGCATCAAATTCTTCTCG TTCTTTGTGCCGCCGGGCGTGCCGCTCTGGATGTGGCCGCTGATGATCCC GATCGAAGTTATCTCCTACCTGTCGCGCCCGGTCAGCCTGGCAATGCGGC TTTTTGCGAACATGCTGGCCGGTCACACCCTGCTTAAGGTGTTTGCTGGC TTCATTCCCGCACTTGGCGCCGCCGGCGTTCTGCCGCTCGCCTTTGTCGG CGCGCTGACCGGTCTGGAATTCCTCATCGCGTTTTTGCAGGCCTACGTTT TCGCGATCCTGACATGCCTGTATATCAACGATGCATTGCATCTCCACTAA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10138:1480..2229-

>mRNA_D-mesarthrocarpus_Contig10138.1.1 ID=mRNA_D-mesarthrocarpus_Contig10138.1.1|Name=mRNA_D-mesarthrocarpus_Contig10138.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=750bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10138:1480..2229- (Discosporangium mesarthrocarpum MT17_79)
TTGGCTACTGATACACACGGCGGAGAACAACACAGCCCGCTGGAACAGTT
CGAGATCAAAGAACTGGTGCCGATTGAAATCGGCGGCAACAGTCTCGCCT
TTACCAATTCAGCACTGATGATGGTGATCGCGGTAACGCTGATCCTGATG
CTGATGATGCTGGGGACACGCAAACGCGCGATGATACCGGGGCGCTGGCA
GTCCGCGGCTGAGCTCTGTTACGAATTCGTCGCCAACCTGATCCGCGATA
CCGTCGGAAATGAAGGCCGAAAGTACTTCCCGTTCATCTTCACGCTGTTC
ATGTTCATCCTGTTCGGCAACATGCTGGGCATGGCGCCTTACAGCTTCAC
ATTCACCAGCCATATCGCGGTGACGTTCGCGATGGCCTTGGTGGTGTTTA
TCGGGGTGACGATCCTCGGCTTCGCCAAGCACGGCATCAAATTCTTCTCG
TTCTTTGTGCCGCCGGGCGTGCCGCTCTGGATGTGGCCGCTGATGATCCC
GATCGAAGTTATCTCCTACCTGTCGCGCCCGGTCAGCCTGGCAATGCGGC
TTTTTGCGAACATGCTGGCCGGTCACACCCTGCTTAAGGTGTTTGCTGGC
TTCATTCCCGCACTTGGCGCCGCCGGCGTTCTGCCGCTCGCCTTTGTCGG
CGCGCTGACCGGTCTGGAATTCCTCATCGCGTTTTTGCAGGCCTACGTTT
TCGCGATCCTGACATGCCTGTATATCAACGATGCATTGCATCTCCACTAA
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