mRNA_D-mesarthrocarpus_Contig1013.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1013.3.1 vs. uniprot
Match: D8LKL7_ECTSI (Alpha/beta hydrolase fold n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKL7_ECTSI) HSP 1 Score: 380 bits (977), Expect = 1.280e-120 Identity = 184/257 (71.60%), Postives = 214/257 (83.27%), Query Frame = 2 Query: 1826 LWGRDKFLDIGQERISYDAFYGARKPAVLYLPAFDAPSHDLKASRLKTYCEMEDHSFISMEWYGRGSSTGEFEKGTISRWKADAMTLIKALLPEYGEGAIIVGGGVGAWIATLIALDMPDKVGGIVGLAADPDFTENLLMRYLPKAKIDEIFENGVATITWGQATYPVSKALIEDARKNLVLEGEAGGLPIRCPVRLVHGLDDEEVPYTVSLDLCRRLESENVNLHLVKTANHHLDGLYILQVVVSSLKECLAAYSP 2596
LWGR+ + IGQ++ISY A G R PAVLYLPAFDAP+HD KA L++YCE E++ FISMEW+G G S G FE GTISRWK DA+TLI LLPE + IIVGGGVG WIATLIAL+ P+KVGGIVGLAADPDFTENLLMRYLPKAKIDEI+E GVATI WG+ +YPVSK LIEDA+ NLVLEG GGLPI CPVRL+HGL+DEEVPYTVSLDL RR++S NVNL+LVKTA+HHLD IL++V++SL+EC+ Y P
Sbjct: 94 LWGREMTMVIGQDKISYMALGGDRSPAVLYLPAFDAPAHDYKADSLRSYCEDEEYPFISMEWFGVGDSEGRFEHGTISRWKQDAITLIDKLLPEAYQEVIIVGGGVGGWIATLIALERPEKVGGIVGLAADPDFTENLLMRYLPKAKIDEIYEKGVATIAWGERSYPVSKVLIEDAKDNLVLEGPVGGLPITCPVRLIHGLNDEEVPYTVSLDLSRRIQSSNVNLYLVKTASHHLDKGSILKMVINSLEECIMNYVP 350
BLAST of mRNA_D-mesarthrocarpus_Contig1013.3.1 vs. uniprot
Match: A0A836CDS8_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDS8_9STRA) HSP 1 Score: 242 bits (618), Expect = 3.080e-70 Identity = 114/227 (50.22%), Postives = 159/227 (70.04%), Query Frame = 2 Query: 1910 LYLPAFDAPSHDLKASRLKTYCEMEDHSFISMEWYGRGSSTGEFEKGTISRWKADAMTLIKALLPEYGEGAIIVGGGVGAWIATLIALDMPDKVGGIVGLAADPDFTENLLMRYLPKAKIDEIFENGVATITWGQATYPVSKALIEDARKNLVLEGEAGGLPIRCPVRLVHGLDDEEVPYTVSLDLCRRLESENVNLHLVKTANHHLDGLYILQVVVSSLKECLAAY 2590
+YLPA D P +DLKA+ +K +C+ +++S +W+G G STG+F +GT++RW AD + LI++L P+ ++VGGGVG W+A L+AL PD V GIVGL ADPDFTENLL ++LP+ EI E G + +TWG YP+S+ALIED R++L+L G GL I CPVRLVHGL DEEVP V L L RRL ++NV + L K+ +H+L ++ ++LK+C+A Y
Sbjct: 1 MYLPALDCPKYDLKATVIKRFCQGTKRTYLSADWFGVGESTGDFAQGTVTRWTADTIKLIESLCPD--SKMVLVGGGVGGWVALLVALQRPDLVAGIVGLGADPDFTENLLWKHLPEETKTEIMEKGSSQVTWGIHQYPISRALIEDGRRHLLLGGPDNGLDIMCPVRLVHGLQDEEVPLDVPLSLARRLRTQNVQVLLQKSGDHYLGDQADFALIKTALKDCIANY 225
BLAST of mRNA_D-mesarthrocarpus_Contig1013.3.1 vs. uniprot
Match: A0A6S9KBJ4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KBJ4_HETAK) HSP 1 Score: 234 bits (598), Expect = 5.160e-66 Identity = 111/253 (43.87%), Postives = 166/253 (65.61%), Query Frame = 2 Query: 1832 GRDKFLDIGQERISYDAFYGARKPAVLYLPAFDAPSHDLKASRLKTYCEMEDHSFISMEWYGRGSSTGEFEKGTISRWKADAMTLIKALLPEYGEGAIIVGGGVGAWIATLIALDMPDKVGGIVGLAADPDFTENLLMRYLPKAKIDEIFENGVATITWGQATYPVSKALIEDARKNLVLEGEAGGLPIRCPVRLVHGLDDEEVPYTVSLDLCRRLESENVNLHLVKTANHHLDGLYILQVVVSSLKECLAAY 2590
GR +L+ + YDAFYG +K V YL + P +D ++++++TYC ++FI+ ++YG G S G F G S+W AD + +I+ L ++ G GVG WIA L+AL PD V GIVGLAADPDFTE+LLM+YL + +I++I ENGV TI WG +YP+SK L+ED R+NLVL G L I CPVRLVH + DEEVP++ ++ L ++ +V ++L+K+ +HHLD + +++++C+ +Y
Sbjct: 78 GRSLYLEYDDTILCYDAFYGDKKSTVYYLTCLNTPKNDCRSTQIETYCRDRGYNFITADYYGVGRSGGTFTDGCPSKWVADTIKVIEEL--SSTPKVVLCGSGVGGWIAVLVALQRPDLVSGIVGLAADPDFTEDLLMKYLSEDEINKIMENGVHTIKWGATSYPISKRLLEDGRENLVLRGAKSSLNITCPVRLVHSMADEEVPFSTAVRLASCIKGNDVKINLLKSNSHHLDNDVGFSAMKAAVEDCIKSY 328
BLAST of mRNA_D-mesarthrocarpus_Contig1013.3.1 vs. uniprot
Match: A0A6S8DHT4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8DHT4_9STRA) HSP 1 Score: 215 bits (548), Expect = 6.120e-59 Identity = 122/286 (42.66%), Postives = 172/286 (60.14%), Query Frame = 2 Query: 1739 PSLLSLRQPRPLCLYSVSQMETQVEEEPDLWGRDKFLD--IGQERISYDAFYGARKP--AVLYLPAFDAPSHDLKASRLKTYCEMEDHSFISMEWYGRGSSTGEFEKGTISRWKADAMTLIKALL-PEYGEGAIIVGGGVGAWIATLIALDMPDKVGGIVGLAADPDFTENLLMRYLPKAKIDEIFENGVATITWGQATYPVSKALIEDARKNLVLEGEAGGLPIRCPVRLVHGLDDEEVPYTVSLDLCRRLESENVNLHLVKTANHHLDGLYILQVVVSSLKECL 2581
P LLS QPRP+ Q T GRD L +G E I YDA + AV++LP+ P + +S L+T+C ++FI ++YG G S G+ TISRW D M L++ + P ++ G GVG WIA L+A+ PD VGGIVGLAADPDFTE+LL++ LP+ ID I V + WG YP++K+LIEDAR +L+L+G GLPI+CPVRL+HG DEEVPY ++ L R+E+++V + L + A H++D + Q V ++++CL
Sbjct: 60 PRLLSA-QPRPV--VDDDQYRTS--------GRDLELPSPVGPESIVYDAEHADENDPVAVVFLPSLALPKVNAMSSSLRTWCRRNKYTFIVADYYGIGRSKGDMRVATISRWLEDTMALLEIVASPSDHRRIVVCGAGVGGWIACLVAVKRPDLVGGIVGLAADPDFTEDLLLKGLPQETIDSIMTGKVHEVKWGDRVYPITKSLIEDARNHLILQGPERGLPIKCPVRLLHGTRDEEVPYQTAIRLAERIETDDVLVSLSR-AQHYMDEIDDFQRVRIAIQDCL 333
BLAST of mRNA_D-mesarthrocarpus_Contig1013.3.1 vs. uniprot
Match: F0Y7X5_AURAN (Uncharacterized protein HDR1 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7X5_AURAN) HSP 1 Score: 203 bits (516), Expect = 4.210e-56 Identity = 100/212 (47.17%), Postives = 151/212 (71.23%), Query Frame = 2 Query: 1952 ASRLKTYCEMEDHSFISMEWYGRGSSTGEFEKGTISRWKADAMTLIKALL-PEYGEGAIIVGGGVGAWIATLIALDMPDKVGGIVGLAADPDFTENLLMRYLPKAKIDEIFENGVATITWGQATYPVSKALIEDARKN-LVLEGEAGGLPIRCPVRLVHGLDDEEVPYTVSLDLCRRLESENVNLHLVKTANHHLDGLYILQVVVSSLKECL 2581
+S L+T+C ++SF+ +++G G STG+ E+ T+S+W D +TL++ + PE ++VG GVG WIA L+A+ PD VGG+VGLAADPDFTE LL++ LP+ ID I E G+ +TWG TYP++KALIEDAR++ L+L+G LPI+CPVRL+HGL DEEVP+ + L +R+E+E+V + L K+ H++D + +Q ++++CL
Sbjct: 2 SSSLRTWCRRNEYSFVVADYHGVGRSTGDVEQATLSKWVDDTVTLLRTVASPEEHRRVVLVGAGVGGWIACLVAMRHPDLVGGVVGLAADPDFTEELLLKRLPQDVIDRIME-GMEEVTWGDKTYPITKALIEDAREHHLLLDGPERTLPIQCPVRLLHGLMDEEVPFDTCVRLAQRIETEDVTISLSKSG-HYMDDIDDMQRTRIAIQDCL 211
BLAST of mRNA_D-mesarthrocarpus_Contig1013.3.1 vs. uniprot
Match: F0YFN0_AURAN (Uncharacterized protein HDR3 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFN0_AURAN) HSP 1 Score: 206 bits (525), Expect = 4.380e-56 Identity = 104/229 (45.41%), Postives = 161/229 (70.31%), Query Frame = 2 Query: 1904 AVLYLPAFDAPSHDLKASRLKTYCEMEDHSFISMEWYGRGSSTGEFEKGTISRWKADAMTLIKALL-PEYGEGAIIVGGGVGAWIATLIALDMPDKVGGIVGLAADPDFTENLLMRYLPKAKIDEIF-ENGVATITWGQATYPVSKALIEDARKN-LVLEGEAGGLPIRCPVRLVHGLDDEEVPYTVSLDLCRRLESENVNLHLVKTANHHLDGLYILQVVVSSLKECL 2581
+V++LP+ P + +S L+T+C ++ SF+ +++G G STG TI++W D +TL++ + PE + ++VG GVG WIA L+A+ PD VGG+VGLA+DPDFTE LL++ LP+ ID+I ++G+ + WG TYP++KALIEDA+ N L+L+G LPI+CPVRL+HGL DEEVPY V++ L RR+E+E+V + L K+ H++D + +Q V ++++CL
Sbjct: 80 SVVFLPSLALPKVNAMSSSLRTWCRRKEFSFVVADYHGVGRSTGNVACATITKWVDDTVTLLRTVANPEEHKRVVLVGAGVGGWIACLVAMRHPDLVGGVVGLASDPDFTEELLLKRLPQDVIDKIMGDDGMDQVHWGGKTYPITKALIEDAKDNHLLLDGPDRVLPIQCPVRLLHGLYDEEVPYDVAVRLARRIETEDVTISLSKSG-HYMDDIDDMQRVRLAIQDCL 307
BLAST of mRNA_D-mesarthrocarpus_Contig1013.3.1 vs. uniprot
Match: A0A7S1XQV2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQV2_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.960e-55 Identity = 103/236 (43.64%), Postives = 146/236 (61.86%), Query Frame = 2 Query: 1832 GRDKFLD-IGQERISYDAFYGARKPAVLYLPAFDAPSHDLKASRLKTYCEMEDHSFISMEWYGRGSSTGEFEKGTISRWKADAMTLIKALLPEYGEGAIIVGGGVGAWIATLIALDMPDKVGGIVGLAADPDFTENLLMRYLPKAKIDEIFENGVATITWGQATYPVSKALIEDARKNLVLEGEAGGLPIRCPVRLVHGLDDEEVPYTVSLDLCRRLESENVNLHLVKTANHHLDG 2536
GR++ L +G + + +D + G + PA++YLP ++ KAS L+++C DH+FI ++ G G S+G+F GT+ RW DA+ +I+ + P ++VG GVG W+ L+A PD V G+VGLAADPDFTE+LL L I E+GV ITWG + YP+S+ LIED RKNLVL GE L I CP+RLVHG+ DEEVP + + + +V ++LVK H LD
Sbjct: 58 GRNQNLPTVGDDSVCFDMWLGTKSPAIVYLPCLHKAKNNAKASNLESWCRQTDHTFICADYMGTGGSSGDFIDGTVGRWTDDAIRMIENVSPS--RKVVLVGAGVGGWVMLLVAKRRPDLVAGLVGLAADPDFTEDLLWEQLDDDVKTSIMEDGVHEITWGDSQYPISRNLIEDGRKNLVLRGEK--LNIDCPIRLVHGMADEEVPVETVFKIADLVNTPDVAVNLVKGGTHFLDS 289
BLAST of mRNA_D-mesarthrocarpus_Contig1013.3.1 vs. uniprot
Match: A0A5J4YWA8_PORPP (Mycophenolic acid acyl-glucuronide esterase, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWA8_PORPP) HSP 1 Score: 203 bits (517), Expect = 8.450e-55 Identity = 103/262 (39.31%), Postives = 159/262 (60.69%), Query Frame = 2 Query: 1835 RDKFLDIGQE--RISYDAFYGARKPAVLYLPAFD-APSHDLKASRLKTYCEMEDHSFISMEWYGRGSSTGEFEKGTISRWKADAMTLIKALLPEYGEGAIIVGGGVGAWIATLIALDMPDKVGGIVGLAADPDFTENLLMRYLPKAKIDEIFENGVATITWGQATYPVSKALIEDARKNLVLEGEAGGLPIRCPVRLVHGLDDEEVPYTVSLDLCRRLESENVNLHLVKTANHHLDGLYILQVVVSSLKECLAAYSPPPMRT 2611
R + L+I E +I YD + G + P V+YLP F A S K + L+T C F+++++YG S GEF GT+SRW D +T++ +LP + ++VG G+G W+ +A+ P+ V G+VGL+ADPDFTE LLM L + + +E+ G+ +TWG YP+SK L++D R LVL GE LPI CPVRL+ GL DEE+P T L++ ++ S +VN+ VK +H L+ +++++++KE Y +R+
Sbjct: 73 RKRNLEIQVEGVKIVYDYYPGEKGPIVMYLPGFFYARSRTAKVNALQTACNRRAQGFLALDYYGTDRSGGEFANGTVSRWVKDVVTILDQILPN--KKVVLVGSGIGGWVMLHVAIQRPEAVVGLVGLSADPDFTERLLMPALSETQREELDSKGIIDLTWGYRKYPISKKLVDDGRNMLVLTGEKDSLPITCPVRLIQGLADEELPSTFPLEIVEKIRSTDVNVTFVKYGDHALENDSDFKLMINAVKEVSDLYFEYDLRS 332
BLAST of mRNA_D-mesarthrocarpus_Contig1013.3.1 vs. uniprot
Match: A0A7S4E1S8_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E1S8_9STRA) HSP 1 Score: 198 bits (503), Expect = 4.120e-53 Identity = 104/256 (40.62%), Postives = 161/256 (62.89%), Query Frame = 2 Query: 1832 GRDKFLDI--GQERISYDAFY---GARKPAVLYLPAFDAPSHDLKASRLKTYCEMEDHSFISMEWYGRGSSTGEFEKGTISRWKADAMTLIKALL-PEYGEGAIIVGGGVGAWIATLIALDMPDKVGGIVGLAADPDFTENLLMRYLPKAKIDEIFENGVATITWGQATYPVSKALIEDARKNLVLEGEAGGLPIRCPVRLVHGLDDEEVPYTVSLDLCRRLESENVNLHLVKTANHHLDGLYILQVVVSSLKECL 2581
GRD L G I +DA + G A+++LP+ P + +S L+T+C +SF+ +++G G S G E+ +S+W AD LI+ + P ++VG GVG WIA +A P+ VGG+VGLAADPDFTE+LL++ L I+ I + G+ I WG +YP+S+ LIEDAR +L+L+G GGL ++CPVRL+HGL+DEEVPYT ++ L R+++E+V + L K+ H++D + + ++++CL
Sbjct: 50 GRDLILKSTDGTSDIVFDAEHAPAGGDPAAIVFLPSLALPKVNAMSSSLRTWCRKNKYSFVVADYHGVGRSKGNIEEACLSKWLADTKQLIETVASPNDHRRVVLVGAGVGGWIAVRLAQTDPELVGGVVGLAADPDFTEDLLLKRLKPDVIERIMD-GMELIKWGDCSYPISRKLIEDARDHLLLKGPDGGLDVQCPVRLLHGLEDEEVPYTTAVRLANRIKTEDVTVSLSKSG-HYMDDIDDFKRTRLAIQDCL 303
BLAST of mRNA_D-mesarthrocarpus_Contig1013.3.1 vs. uniprot
Match: M2XMT5_GALSU (Hydrolase or acyltransferase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XMT5_GALSU) HSP 1 Score: 198 bits (504), Expect = 4.330e-53 Identity = 101/275 (36.73%), Postives = 166/275 (60.36%), Query Frame = 2 Query: 1772 LCLYSVSQMETQVEEEPDLWGRDKFLDIGQERISYDAFYGARKPAVLYLPAFDAPSHDLKASRLKTYCEMEDHSFISMEWYGRGSSTGEFEKGTISRWKADAMTLIKALLPEYGEGAIIVGGGVGAWIATLIALDMPDKVGGIVGLAADPDFTENLLMRYLPKAKIDEIFENGVATITWGQATYPVSKALIEDARKNLVLEGEAGGLPIRCPVRLVHGLDDEEVPYTVSLDLCRRLESENVNLHLVKTANHHLDGLYILQVVVSSLKE-CLAAYS 2593
+CL + S ET + + G+++ G+++I+YD F G P VL+LP H K + L+ C+++ +++S ++YG G S+G+ GT+SRW D + L+ L+PE ++VG GVG W+A + L P ++ GIVG+A DPDFT+++L L + I + G+ + WG TYP+S+ LIED +K +L+G +G + I CPVR++HGL+DEE+P +L L RL S+++ + VK+ H L+ Q ++SS+ E C +Y+
Sbjct: 55 VCLENASTTETVLGQ-----GKNQIFRKGEDKIAYDYFPG-ELPTVLFLPGLSMNRHSAKGNALEVACKIQKRAYLSADYYGIGRSSGDIRDGTVSRWTEDTVDLMDHLIPE--GPVVLVGAGVGGWVALHVTLRRPQRIAGIVGVAPDPDFTQDVLWPKLSDEVKNIIMKEGLYELPWGYRTYPISRNLIEDGKKMCLLQGSSGSIEIDCPVRIIHGLNDEEIPPQRALRLADRLRSQDIVISFVKSGGHTLETEDDFQRMISSVVELCKKSYT 321 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1013.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1013.3.1 >prot_D-mesarthrocarpus_Contig1013.3.1 ID=prot_D-mesarthrocarpus_Contig1013.3.1|Name=mRNA_D-mesarthrocarpus_Contig1013.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=279bp METQVEEEPDLWGRDKFLDIGQERISYDAFYGARKPAVLYLPAFDAPSHDback to top mRNA from alignment at D-mesarthrocarpus_Contig1013:11389..21152- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1013.3.1 ID=mRNA_D-mesarthrocarpus_Contig1013.3.1|Name=mRNA_D-mesarthrocarpus_Contig1013.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=9764bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1013:11389..21152- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1013:11389..21152- >mRNA_D-mesarthrocarpus_Contig1013.3.1 ID=mRNA_D-mesarthrocarpus_Contig1013.3.1|Name=mRNA_D-mesarthrocarpus_Contig1013.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=837bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1013:11389..21152- (Discosporangium mesarthrocarpum MT17_79)back to top |