mRNA_D-mesarthrocarpus_Contig10122.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10122.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10122.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10122.1.1 vs. uniprot
Match: D7FUS1_ECTSI (Nitrate/nitrite transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUS1_ECTSI)

HSP 1 Score: 707 bits (1825), Expect = 3.150e-248
Identity = 344/445 (77.30%), Postives = 386/445 (86.74%), Query Frame = 2
Query:    2 PVDPKQSDKATSIKLFSVRRPHMRAFHFAWFGFFMAFVCWFSFAPLMTEIKEDLGMSKAEVYNANISSVSSTVLSRFIVGPLCDTFGARLISSSLLLMGAIPTFFGGLVNSAVDVAVIRFFIGVMGATFVCTQYWSAQMFAKEIVGTANATTAGWGNLGGGVTQIFMVGIWAAFKTAYDKETAWRLSFIVPAAIVLVVAFGQAFLADDCPKGNYKELIAHNVMMRKSSATSFKKGYLNFNSWVMFVQYAACFGVELTINNTAAGYFTNEFGLSTEKAGLVASLFGLMNLFARSLGGIFSDTLNKRFGSGVPGMRGRFIAQWTALLWEGVFLCVFSRQTKLAPAIACLLLFSLGVQSAEGTSYGIVPYICPEATGAVSGIVGAGGNFGAVMWGLIFRFGPSLEKDVYLLLGFIVIGLSLTTPFFKIRGYDGVFTKAQGEPDSIAEI 1336
            P+DPKQ DKAT++KL+S RRPHMRAFHFAWFGFFMAFV WF+FAPLM EIK DLGM+K EVYNANISSVSST+LSRF+VGPLCDTFGAR+ SS+LLLMG IPTFF GLVNSA DVA+IRFFIGVMGATFVCTQYW++Q+FAKE VGTANAT+AGWGNLGGGVTQIFMVGIW AFKT+YD ETAWRLSF+VPAAIV  VA GQ FLADDCPKGNYKEL AH  M RKSSA SFKKGY N NSW+MF QYAACFGVELT+NN AA YF++EFGLST KAG+VASLFGLMNLFARS+GGI+SD L ++FG+GV GMRGRF AQW+AL+WEG FL +F+    L  AI  L+LFS+GVQ +EGTSYGIVPYI P+ATGAVSGIVGAGGNFGAVMWGLIFRFGP+ E+ V+ ++  IV+ LS TTP  KIRGY   F   +GEPDSIAEI
Sbjct:   13 PIDPKQQDKATTLKLYSFRRPHMRAFHFAWFGFFMAFVSWFAFAPLMKEIKADLGMTKNEVYNANISSVSSTILSRFVVGPLCDTFGARITSSTLLLMGCIPTFFAGLVNSATDVAIIRFFIGVMGATFVCTQYWTSQVFAKEFVGTANATSAGWGNLGGGVTQIFMVGIWNAFKTSYDSETAWRLSFLVPAAIVFCVAIGQVFLADDCPKGNYKELEAHGAMTRKSSAVSFKKGYSNVNSWIMFAQYAACFGVELTVNNVAANYFSDEFGLSTSKAGMVASLFGLMNLFARSVGGIWSDFLYRKFGAGVTGMRGRFFAQWSALVWEGCFLFLFTYMNTLGAAIPILILFSVGVQMSEGTSYGIVPYIVPDATGAVSGIVGAGGNFGAVMWGLIFRFGPTSERSVFRIIAAIVVALSCTTPLMKIRGYASCFGAPKGEPDSIAEI 457          
BLAST of mRNA_D-mesarthrocarpus_Contig10122.1.1 vs. uniprot
Match: D7FUR8_ECTSI (Nitrate high affinity transporter n=4 Tax=Ectocarpus TaxID=2879 RepID=D7FUR8_ECTSI)

HSP 1 Score: 692 bits (1785), Expect = 3.630e-242
Identity = 344/445 (77.30%), Postives = 377/445 (84.72%), Query Frame = 2
Query:    2 PVDPKQSDKATSIKLFSVRRPHMRAFHFAWFGFFMAFVCWFSFAPLMTEIKEDLGMSKAEVYNANISSVSSTVLSRFIVGPLCDTFGARLISSSLLLMGAIPTFFGGLVNSAVDVAVIRFFIGVMGATFVCTQYWSAQMFAKEIVGTANATTAGWGNLGGGVTQIFMVGIWAAFKTAYDKETAWRLSFIVPAAIVLVVAFGQAFLADDCPKGNYKELIAHNVMMRKSSATSFKKGYLNFNSWVMFVQYAACFGVELTINNTAAGYFTNEFGLSTEKAGLVASLFGLMNLFARSLGGIFSDTLNKRFGSGVPGMRGRFIAQWTALLWEGVFLCVFSRQTKLAPAIACLLLFSLGVQSAEGTSYGIVPYICPEATGAVSGIVGAGGNFGAVMWGLIFRFGPSLEKDVYLLLGFIVIGLSLTTPFFKIRGYDGVFTKAQGEPDSIAEI 1336
            P+DPKQ DKAT  KL+S RRPHMRAFHFAWFGFFMAFV WF+FAPLM EIK DLGM+K EVYNANISSVSSTVLSRFIVGPLCDTFGAR+ISS+LL+MG IPT F GLVNSA DVA+IRFFIGVMGATFVCTQ+WS+Q+FAKE VGTANATT GWGNLGGGVTQIFMV IW AFKT+YD ETAWRLSF+VPAAIV  VA GQ FLADD PKGNYKEL AH  M RKSSA SFKKGY+N NSW+MF+QYAACFGVELT+NN AA YF++EF LST KAGLVASLFGLMNLFARSLGGI+SD L  +FG GV GMRGRF AQWTALLWEG FL +F+   +L  AI  L+LFS+GVQ AEGTSYGIVPYI P+ATGAVSGIVGAGGNFGAVMWGLIFRF    E+ V+ ++   V+GLS  TP  KIRGY   F   QGEPDSIA+I
Sbjct:   13 PIDPKQQDKATMFKLYSFRRPHMRAFHFAWFGFFMAFVSWFAFAPLMKEIKADLGMTKLEVYNANISSVSSTVLSRFIVGPLCDTFGARIISSTLLIMGCIPTAFAGLVNSATDVAIIRFFIGVMGATFVCTQFWSSQIFAKEFVGTANATTGGWGNLGGGVTQIFMVAIWNAFKTSYDSETAWRLSFLVPAAIVFCVAVGQLFLADDSPKGNYKELEAHGAMTRKSSAVSFKKGYMNVNSWLMFLQYAACFGVELTVNNVAANYFSDEFDLSTSKAGLVASLFGLMNLFARSLGGIWSDFLFAKFGGGVTGMRGRFFAQWTALLWEGCFLFLFTFMNQLGAAIPVLILFSVGVQMAEGTSYGIVPYIVPDATGAVSGIVGAGGNFGAVMWGLIFRFAGRSERAVFRIIAAFVVGLSCLTPLLKIRGYATCFAAPQGEPDSIADI 457          
BLAST of mRNA_D-mesarthrocarpus_Contig10122.1.1 vs. uniprot
Match: A0A812ST29_9DINO (Nitrate/nitrite transporter n=2 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812ST29_9DINO)

HSP 1 Score: 550 bits (1418), Expect = 2.540e-186
Identity = 268/444 (60.36%), Postives = 330/444 (74.32%), Query Frame = 2
Query:    5 VDPKQSDKATSIKLFSVRRPHMRAFHFAWFGFFMAFVCWFSFAPLMTEIKEDLGMSKAEVYNANISSVSSTVLSRFIVGPLCDTFGARLISSSLLLMGAIPTFFGGLVNSAVDVAVIRFFIGVMGATFVCTQYWSAQMFAKEIVGTANATTAGWGNLGGGVTQIFMVGIWAAFKTAYDKETAWRLSFIVPAAIVLVVAFGQAFLADDCPKGNYKELIAHNVMMRKSSATSFKKGYLNFNSWVMFVQYAACFGVELTINNTAAGYFTNEFGLSTEKAGLVASLFGLMNLFARSLGGIFSDTLNKRFGSGVPGMRGRFIAQWTALLWEGVFLCVFSRQTKLAPAIACLLLFSLGVQSAEGTSYGIVPYICPEATGAVSGIVGAGGNFGAVMWGLIFRFGPSLEKDVYLLLGFIVIGLSLTTPFFKIRGYDGVFTKAQGEPDSIAEI 1336
            VDPKQ D+AT IKL S +RPHMR FHFAWFGFF+AF  WF+FAPLM +IK+DLG++K E+YNANI+SV+STVL RF VGPLCD FG R + S LL  GAIP FFGGLVN+A  + +IRF IGV+GATFV  Q W +Q+FAKEIVGTANA   GWGNLGGG  Q+ MVG+W  F+T +D E AWRLSFIVP  +         F +DD PKGN+KEL     M R+SS  SF++G+  +N+W++F+QYAACFGVE+T+NN  A Y   ++ LS   AGL+ASLFGLMNLFAR++GG  SD L + FG+G  GMRGR  AQ  +L+WEG+ L +F++   L   I  LLLFSLGVQ AEG ++GIVPY+ P ATGAVSG+VGAGGN GAV WGL+FRFGPS   DV  +LGFIVI  ++   F  I+G+DG  TKA+GEP+S+  I
Sbjct:   38 VDPKQGDRATKIKLLSFKRPHMRGFHFAWFGFFIAFASWFAFAPLMPQIKKDLGLTKDEMYNANIASVASTVLMRFAVGPLCDRFGTRTMFSMLLTFGAIPVFFGGLVNNATGLVIIRFVIGVLGATFVPCQAWCSQLFAKEIVGTANAMAGGWGNLGGGAVQLLMVGVWNMFRTGFDDEEAWRLSFIVPGVLTCGTGICMYFFSDDSPKGNFKELEQRGTMERRSSKKSFQEGFFQYNAWILFIQYAACFGVEVTMNNILAVYLETKYELSVSLAGLIASLFGLMNLFARAMGGALSDKLFQWFGAGTTGMRGRIYAQSISLVWEGIMLLIFTKMDSLGATIGVLLLFSLGVQMAEGCTFGIVPYVKPTATGAVSGVVGAGGNVGAVCWGLMFRFGPSEADDVLFILGFIVIASAVMGLFVLIQGHDGCITKAKGEPESLDVI 481          
BLAST of mRNA_D-mesarthrocarpus_Contig10122.1.1 vs. uniprot
Match: A0A812SSL6_9DINO (Nitrate/nitrite transporter n=3 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SSL6_9DINO)

HSP 1 Score: 551 bits (1421), Expect = 7.990e-186
Identity = 270/444 (60.81%), Postives = 329/444 (74.10%), Query Frame = 2
Query:    5 VDPKQSDKATSIKLFSVRRPHMRAFHFAWFGFFMAFVCWFSFAPLMTEIKEDLGMSKAEVYNANISSVSSTVLSRFIVGPLCDTFGARLISSSLLLMGAIPTFFGGLVNSAVDVAVIRFFIGVMGATFVCTQYWSAQMFAKEIVGTANATTAGWGNLGGGVTQIFMVGIWAAFKTAYDKETAWRLSFIVPAAIVLVVAFGQAFLADDCPKGNYKELIAHNVMMRKSSATSFKKGYLNFNSWVMFVQYAACFGVELTINNTAAGYFTNEFGLSTEKAGLVASLFGLMNLFARSLGGIFSDTLNKRFGSGVPGMRGRFIAQWTALLWEGVFLCVFSRQTKLAPAIACLLLFSLGVQSAEGTSYGIVPYICPEATGAVSGIVGAGGNFGAVMWGLIFRFGPSLEKDVYLLLGFIVIGLSLTTPFFKIRGYDGVFTKAQGEPDSIAEI 1336
            VDPKQ D+AT IKL S +RPHMR FHFAWFGFFMAF  WF+FAPLM +IK+DLG++K EVYNANI+SV+STVL RF VGPLCD FG R + S LL  GAIP FFGGLVN+   + +IRF IGV+GATFV  Q W +Q+FAKEIVGTANA   GWGNLGGG  Q+ MVG+W  F+T +D E AWRLSFIVP  +         F +DD PKGN+KEL     M RKSS  SF++G+  +N+W++F+QYAACFGVE+T+NN  A Y   ++ LS   AGL+ASLFGLMNLFAR++GG  SD L + FG+G  GMRGR  AQ  +L+WEG+ L +F++   L   I  LLLFSLGVQ AEG ++GIVPY+ P ATGAVSG+VGAGGN GAV WGL+FRFGPS   DV  +LGFIVI  ++   F  I+G+DG  TKA+GEP+S+  I
Sbjct:  101 VDPKQGDRATEIKLLSFKRPHMRGFHFAWFGFFMAFSSWFAFAPLMPQIKKDLGLTKDEVYNANIASVASTVLMRFAVGPLCDRFGTRTMFSMLLTFGAIPVFFGGLVNNGTGLVIIRFVIGVLGATFVPCQAWCSQLFAKEIVGTANAMAGGWGNLGGGAVQLLMVGVWNMFRTGFDDEEAWRLSFIVPGVLTCGTGICMYFFSDDSPKGNFKELEQRGTMERKSSKKSFQEGFCQYNAWILFIQYAACFGVEVTMNNILAVYLETKYELSVSLAGLIASLFGLMNLFARAMGGALSDKLFQWFGAGTTGMRGRIYAQSISLVWEGIMLLIFTKMDSLGATIGVLLLFSLGVQMAEGCTFGIVPYVKPTATGAVSGVVGAGGNVGAVCWGLMFRFGPSEADDVLFILGFIVIASAVMGLFVLIQGHDGCITKAKGEPESLDVI 544          
BLAST of mRNA_D-mesarthrocarpus_Contig10122.1.1 vs. uniprot
Match: A0A812SYP8_9DINO (NRT2.5 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SYP8_9DINO)

HSP 1 Score: 555 bits (1430), Expect = 1.290e-185
Identity = 270/444 (60.81%), Postives = 329/444 (74.10%), Query Frame = 2
Query:    5 VDPKQSDKATSIKLFSVRRPHMRAFHFAWFGFFMAFVCWFSFAPLMTEIKEDLGMSKAEVYNANISSVSSTVLSRFIVGPLCDTFGARLISSSLLLMGAIPTFFGGLVNSAVDVAVIRFFIGVMGATFVCTQYWSAQMFAKEIVGTANATTAGWGNLGGGVTQIFMVGIWAAFKTAYDKETAWRLSFIVPAAIVLVVAFGQAFLADDCPKGNYKELIAHNVMMRKSSATSFKKGYLNFNSWVMFVQYAACFGVELTINNTAAGYFTNEFGLSTEKAGLVASLFGLMNLFARSLGGIFSDTLNKRFGSGVPGMRGRFIAQWTALLWEGVFLCVFSRQTKLAPAIACLLLFSLGVQSAEGTSYGIVPYICPEATGAVSGIVGAGGNFGAVMWGLIFRFGPSLEKDVYLLLGFIVIGLSLTTPFFKIRGYDGVFTKAQGEPDSIAEI 1336
            VDPKQ D+ T IKL S +RPHMR FHFAWFGFFMAF  WF+FAPLM +IK+DLG++K EVYNANI+SV+STVL RF VGPLCD FG R + S LL  GAIP FFGGLVN+   + +IRF IGV+GATFV  Q W +Q+FAKEIVGTANA   GWGNLGGG  Q+ MVG+W  F+T +D E AWRLSFIVP  +         F +DD PKGN+KEL     M R+SS  SF++G+  +N+W++F+QYAACFGVE+T+NN  AGY   ++ LS   AGL+ASLFGLMNLFAR++GG  SD L + FG+G  GMRGR  AQ  +L+WEG+ L +F++   L   I  LLLFSLGVQ AEG ++GIVPY+ P ATGAVSG+VGAGGN GAV WGLIFRFGPS   DV  +LGFIVI  ++   F  I+G+DG  TKA+GEP+S+  I
Sbjct:  208 VDPKQGDRTTEIKLLSFKRPHMRGFHFAWFGFFMAFSSWFAFAPLMPQIKKDLGLTKDEVYNANIASVASTVLMRFAVGPLCDRFGTRTMFSMLLTFGAIPVFFGGLVNNGTGLVIIRFVIGVLGATFVPCQAWCSQLFAKEIVGTANAMAGGWGNLGGGAVQLLMVGVWNMFRTGFDDEEAWRLSFIVPGVLTCGTGISMYFFSDDSPKGNFKELEQRGAMERRSSKKSFQEGFFQYNAWILFIQYAACFGVEVTMNNILAGYLETKYELSVSLAGLIASLFGLMNLFARAMGGALSDKLFQLFGAGTTGMRGRIYAQSISLVWEGIMLLIFTQMDSLGATIGVLLLFSLGVQMAEGCTFGIVPYVKPTATGAVSGVVGAGGNVGAVCWGLIFRFGPSEADDVLFILGFIVIASAVMGLFVLIQGHDGCITKAKGEPESLDVI 651          
BLAST of mRNA_D-mesarthrocarpus_Contig10122.1.1 vs. uniprot
Match: A0A812T2A0_9DINO (NRT2.5 protein n=3 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812T2A0_9DINO)

HSP 1 Score: 553 bits (1426), Expect = 5.130e-178
Identity = 270/444 (60.81%), Postives = 329/444 (74.10%), Query Frame = 2
Query:    5 VDPKQSDKATSIKLFSVRRPHMRAFHFAWFGFFMAFVCWFSFAPLMTEIKEDLGMSKAEVYNANISSVSSTVLSRFIVGPLCDTFGARLISSSLLLMGAIPTFFGGLVNSAVDVAVIRFFIGVMGATFVCTQYWSAQMFAKEIVGTANATTAGWGNLGGGVTQIFMVGIWAAFKTAYDKETAWRLSFIVPAAIVLVVAFGQAFLADDCPKGNYKELIAHNVMMRKSSATSFKKGYLNFNSWVMFVQYAACFGVELTINNTAAGYFTNEFGLSTEKAGLVASLFGLMNLFARSLGGIFSDTLNKRFGSGVPGMRGRFIAQWTALLWEGVFLCVFSRQTKLAPAIACLLLFSLGVQSAEGTSYGIVPYICPEATGAVSGIVGAGGNFGAVMWGLIFRFGPSLEKDVYLLLGFIVIGLSLTTPFFKIRGYDGVFTKAQGEPDSIAEI 1336
            VDPKQ D+AT IKL S +RPHMR FHFAWFGFFMAF  WF+FAPLM +IK+DLG++K EVYNANI+SV+STVL RF VGPLCD FG R + S LL  GAIP FFGGLVN+   + +IRF IGV+GATFV  Q W +Q+FAKEIVGTANA   GWGNLGGG  Q+ MVG+W  F+T +D E AWRLSFIVP  +         F +DD PKGN+KEL     M R+SS  SF++G+  +N+W++F+QYAACFGVE+T+NN  A Y   ++ LS   AGL+ASLFGLMNLFAR++GG  SD L + FG+G  GMRGR  AQ  +L+WEG+ L +F++   L   I  LLLFSLGVQ AEG ++GIVPY+ P ATGAVSG+VGAGGN GAV WGLIFRFGPS   DV  +LGFIVI  ++   F  I+G+DG  TKA+GEP+S+  I
Sbjct:  769 VDPKQGDRATEIKLLSFKRPHMRGFHFAWFGFFMAFSSWFAFAPLMPQIKKDLGLTKDEVYNANIASVASTVLMRFAVGPLCDRFGTRTMFSMLLTFGAIPVFFGGLVNNGTGLVIIRFVIGVLGATFVPCQAWCSQLFAKEIVGTANAMAGGWGNLGGGAVQLLMVGVWNMFRTGFDDEEAWRLSFIVPGVLTCGTGISMYFFSDDSPKGNFKELEQRGTMERRSSKKSFQEGFFQYNAWILFIQYAACFGVEVTMNNILAVYLETKYELSVSLAGLIASLFGLMNLFARAMGGALSDKLFQLFGAGTTGMRGRIYAQSISLVWEGIMLLIFTKMDSLGATIGVLLLFSLGVQMAEGCTFGIVPYVKPTATGAVSGVVGAGGNVGAVCWGLIFRFGPSEADDVLFILGFIVIASAVMGLFVLIQGHDGCITKAKGEPESLDVI 1212          
BLAST of mRNA_D-mesarthrocarpus_Contig10122.1.1 vs. uniprot
Match: A0A836CM93_9STRA (Nitrate high affinity transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM93_9STRA)

HSP 1 Score: 503 bits (1296), Expect = 3.360e-168
Identity = 247/445 (55.51%), Postives = 325/445 (73.03%), Query Frame = 2
Query:    2 PVDPKQSDKATSIKLFSVRRPHMRAFHFAWFGFFMAFVCWFSFAPLMTEIKEDLGMSKAEVYNANISSVSSTVLSRFIVGPLCDTFGARLISSSLLLMGAIPTFFGGLVNSAVDVAVIRFFIGVMGATFVCTQYWSAQMFAKEIVGTANATTAGWGNLGGGVTQIFMVGIWAAFKTAYDKETAWRLSFIVPAAIVLVVAFGQAFLADDCPKGNYKELIAHNVMMRKSSATSFKKGYLNFNSWVMFVQYAACFGVELTINNTAAGYFTNEFGLSTEKAGLVASLFGLMNLFARSLGGIFSDTLNKRFGSGVPGMRGRFIAQWTALLWEGVFLCVFSRQTKLAPAIACLLLFSLGVQSAEGTSYGIVPYICPEATGAVSGIVGAGGNFGAVMWGLIFRFGPSLEKDVYLLLGFIVIGLSLTTPFFKIRGYDGVFTKAQGEPDSIAEI 1336
            P DPKQ D+AT ++L + RRPHM+ F  +   +F AF  WFSFAPLM E+K+DLG+S ++VYNANIS+VS+T+++R +VGPL D  GAR   S LL  G++P F  GLV+SA  +A++RFFIGV+GA FVC Q  ++QMF++E++GTA+A + GWGNLGGGV QI MV IW+  K     ETAWR+SFI PAA VL+++       DD PKG YKELIAH  M+RKSSA +  +GY ++NSW++ + YAAC GVELT  NT A YF ++FGL T KAGL+A++FGLM +F R+ GG+ SD+  K FG G  GMRGR I Q   L  EGV L +FSR   L  AIA L  F++GVQ +EG+++GIVP +CPEATGAVSGIVGAGGN GA+ +GL+FRFGPS  +  +LLLGFIV+G +  TP  +++G+DG+FT+A+ E     +I
Sbjct:   20 PTDPKQGDRATVLRLRNGRRPHMQTFWVSTLAWFAAFTAWFSFAPLMPEVKKDLGLSTSDVYNANISAVSATLVARLVVGPLADALGARTTFSLLLAAGSVPVFCSGLVDSAGSLALVRFFIGVLGACFVCNQILASQMFSREVIGTASAVSGGWGNLGGGVCQIAMVLIWSGLKQGLPHETAWRVSFIFPAAFVLIMSVVVLTRCDDSPKGQYKELIAHGAMVRKSSAKAASQGYRDYNSWILTIHYAACLGVELTTLNTCATYFDDKFGLGTTKAGLIATVFGLMQIFTRASGGLLSDSAFKHFGGGSTGMRGRIIVQMCTLTAEGVCLVIFSRMNSLGSAIALLTSFAVGVQMSEGSTFGIVPSVCPEATGAVSGIVGAGGNLGAIAFGLLFRFGPSAPETCFLLLGFIVLGCAALTPLLRLKGHDGMFTRAKVEEPGAIDI 464          
BLAST of mRNA_D-mesarthrocarpus_Contig10122.1.1 vs. uniprot
Match: A0A835YTD5_9STRA (Nitrate high affinity transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTD5_9STRA)

HSP 1 Score: 481 bits (1237), Expect = 3.950e-159
Identity = 238/444 (53.60%), Postives = 310/444 (69.82%), Query Frame = 2
Query:    5 VDPKQSDKATSIKLFSVRRPHMRAFHFAWFGFFMAFVCWFSFAPLMT--EIKEDLGMSKAEVYNANISSVSSTVLSRFIVGPLCDTFGARLISSSLLLMGAIPTFFGGLVNSAVDVAVIRFFIGVMGATFVCTQYWSAQMFAKEIVGTANATTAGWGNLGGGVTQIFMVGIWAAFKTAYDKETAWRLSFIVPAAIVLVVAFGQAFLADDCPKGNYKELIAHNVMMRKSSATSFKKGYLNFNSWVMFVQYAACFGVELTINNTAAGYFTNEFGLSTEKAGLVASLFGLMNLFARSLGGIFSDTLNKRFGSGVPGMRGRFIAQWTALLWEGVFLCVFS-RQTKLAPAIACLLLFSLGVQSAEGTSYGIVPYICPEATGAVSGIVGAGGNFGAVMWGLIFRFGPSLEKDVYLLLGFIVIGLSLTTPFFKIRGYDGVFTKAQGEPDSI 1327
            VDPKQ D+A   KL +  RPHMR+F+ + F FFMAF CWFSFAPL+    IK +L ++  +V NANI+++ STV+ R I+GPLCD FGAR++ + LL  GAIPTFF GLV  A  +AV RFF+G +GATFV  Q WS+ MF K IVG ANAT+AGWGNLGGGVT + MVG++  +K   D ETAWR+SFIVPAA+V++ AF    LADDCPKGNY ELI HN M+RKSS  S +    + NSW++ + Y   FG+EL + N +  YF N FG+   KA LV++ FG  N+F+R  GG  SDT+N+RFG+G  GMRGR + Q   +L  G  L  FS ++  +  +IACL+ F++ +Q+  G++Y IVPY+ PEATGAVSG+ GAGGN GAV W LIFRFGP+     + +L +IV+G + T P   IRGYD +FTKA+ E  +I
Sbjct:   19 VDPKQDDRAVEFKLSTFSRPHMRSFYISTFAFFMAFACWFSFAPLLAVGTIKANLSLTADDVSNANIAALCSTVIGRAILGPLCDAFGARIVMACLLFFGAIPTFFQGLVQDAQGLAVCRFFVGFLGATFVANQAWSSAMFGKSIVGRANATSAGWGNLGGGVTHLIMVGLYEGYKQVTDPETAWRVSFIVPAAVVMMCAFAVFLLADDCPKGNYNELIKHNSMVRKSSKKSAESALKSPNSWILALHYGCSFGIELIVFNVSTSYFVNSFGMKLSKAALVSAAFGFFNIFSRPGGGFLSDTMNRRFGAGSRGMRGRILTQLILMLCSGSMLLAFSFQEDSMGGSIACLIAFAIAMQAVNGSTYSIVPYVAPEATGAVSGMTGAGGNVGAVCWSLIFRFGPA-PNLCFRILSYIVLGAACTVPLINIRGYDTLFTKAKDEMAAI 461          
BLAST of mRNA_D-mesarthrocarpus_Contig10122.1.1 vs. uniprot
Match: A0A835YQD5_9STRA (Nitrate high affinity transporter n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQD5_9STRA)

HSP 1 Score: 474 bits (1219), Expect = 1.980e-156
Identity = 234/444 (52.70%), Postives = 309/444 (69.59%), Query Frame = 2
Query:    5 VDPKQSDKATSIKLFSVRRPHMRAFHFAWFGFFMAFVCWFSFAPLMTE--IKEDLGMSKAEVYNANISSVSSTVLSRFIVGPLCDTFGARLISSSLLLMGAIPTFFGGLVNSAVDVAVIRFFIGVMGATFVCTQYWSAQMFAKEIVGTANATTAGWGNLGGGVTQIFMVGIWAAFKTAYDKETAWRLSFIVPAAIVLVVAFGQAFLADDCPKGNYKELIAHNVMMRKSSATSFKKGYLNFNSWVMFVQYAACFGVELTINNTAAGYFTNEFGLSTEKAGLVASLFGLMNLFARSLGGIFSDTLNKRFGSGVPGMRGRFIAQWTALLWEGVFLCVFSRQT-KLAPAIACLLLFSLGVQSAEGTSYGIVPYICPEATGAVSGIVGAGGNFGAVMWGLIFRFGPSLEKDVYLLLGFIVIGLSLTTPFFKIRGYDGVFTKAQGEPDSI 1327
            VDPKQ D+AT  KL +  RPHMR+F+ + F FFMAF CWFSFAPL+ E  +K DL ++  ++ NANI+++SSTV++R I+GPLCD FGAR++ + LL  GAIPTFF GLV  A  +AV RFF+G +GATFV  Q WS+ MF K +VG ANAT+AGWGNLGGGVT + MVG++  +K     E AWR+SFIVPAAIV++ +F     ADDCPKGNY ELI H+ M+RKSS  S      + NSW++ + Y   FGVEL + N +  YF   FG++  KA LV++ FG  N+F+R  GG  SDT+N++FG+G  GMRGR I  +  +L  G  L  FS Q   L  +IACL+ F++ +Q+  G++Y IVPY+ PEATGAVSG+ GAGGN GAV W LIFRFGP+     + +L +I++G + T P   IRGYD +FTKA+ E  ++
Sbjct:   21 VDPKQDDRATEFKLSTFSRPHMRSFYISTFSFFMAFACWFSFAPLVAEGTVKTDLKLTPDDISNANIAALSSTVIARMILGPLCDAFGARIVMAGLLFFGAIPTFFQGLVQDATGLAVCRFFVGFLGATFVANQAWSSAMFGKNVVGRANATSAGWGNLGGGVTHLIMVGLYEGYKKIMSTEMAWRVSFIVPAAIVMLCSFATFLFADDCPKGNYNELIKHSAMVRKSSKKSATSALQSPNSWILALHYGCSFGVELIVFNVSTTYFVKGFGMTLPKAALVSAAFGFFNIFSRPGGGWLSDTMNQKFGAGSTGMRGRLIVHFILMLCSGCMLLAFSFQNHSLGGSIACLIAFAICMQAVNGSTYSIVPYVAPEATGAVSGMAGAGGNVGAVCWSLIFRFGPA-PNLCFRILSYIILGAACTAPLINIRGYDTLFTKAKDEMAAV 463          
BLAST of mRNA_D-mesarthrocarpus_Contig10122.1.1 vs. uniprot
Match: A0A1Z5K889_FISSO (Nitrate/nitrite transporter n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K889_FISSO)

HSP 1 Score: 449 bits (1155), Expect = 5.490e-147
Identity = 228/429 (53.15%), Postives = 298/429 (69.46%), Query Frame = 2
Query:    5 VDPKQSDKATSIKLFSVRRPHMRAFHFAWFGFFMAFVCWFSFAPLMTEIKEDLGMSKAEVYNANISSVSSTVLSRFIVGPLCDTFGARLISSSLLLMGAIPTFFGGLVNSAVDVAVIRFFIGVMGATFVCTQYWSAQMFAKEIVGTANATTAGWGNLGGGVTQIFMVGI-WAAFKTAYD--KETAWRLSFIVPAAIVLVVAFGQAFLADDCPKGNYKELIAHNVMMRKSSATSFKKGYLNFNSWVMFVQYAACFGVELTINNTAAGYFTNEFGLSTEKAGLVASLFGLMNLFARSLGGIFSDTLNKRFGSGVPGMRGRFIAQWTALLWEGVFLCVFSRQTKLAPAIACLLLFSLGVQSAEGTSYGIVPYICPEATGAVSGIVGAGGNFGAVMWGLIFRFGPSLEKDVYLLLGFIVIGLSLTTPFFKIRG 1282
            VDP Q DKAT IKLFS+ RPHMRAFH +WFGFFMAF  WFS APL++EI+ DLG++K ++++ ++ +V  T+L RFI+GPLCD FG RL    +L+  +IPT   GL NS   + +IR  IG+ G TFV  QYW+ +MF K +VGTANAT  GWGNLGGGVTQ+ +  I +  FK  YD   E AWR  F+VPA +   VA      ++D PKGNY E+  H VM   S+A SF+    NFN+W++F+QYAACFGVELT+NN AA YFT+EFG STE A  +AS+FG MNLFAR +GG+FSD  N + G     M+GR +     LL EG+ + VF+    ++ AI  ++ FSL VQ+AEGTS+GIVPYI P ATGA+SG+VG GGN GAV +G+ FR   S EK  ++++GF +IG ++ + F KI+G
Sbjct:   20 VDPDQDDKATEIKLFSIARPHMRAFHMSWFGFFMAFFIWFSAAPLLSEIRGDLGLTKKQIWSTSVIAVGGTILFRFIMGPLCDKFGPRLPFVGVLMFASIPTGLTGLANSFNSLLIIRLLIGIAGCTFVMCQYWTTRMFTKSVVGTANATVGGWGNLGGGVTQLVVGSILFPLFKVIYDGDSEKAWRTVFVVPAVVTFSVAVCMLLFSEDAPKGNYGEMKKHGVMPEVSAAASFRAASFNFNTWILFLQYAACFGVELTMNNAAALYFTDEFGQSTESAAAIASIFGWMNLFARGMGGVFSDLFNAKMG-----MKGRILIHTLFLLGEGILVMVFANTKTMSSAIVVMIFFSLCVQAAEGTSFGIVPYIDPPATGAISGLVGGGGNCGAVAFGMAFRE-LSYEK-AFMIMGFFIIGSAILSLFIKIKG 441          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10122.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUS1_ECTSI3.150e-24877.30Nitrate/nitrite transporter n=2 Tax=Ectocarpus Tax... [more]
D7FUR8_ECTSI3.630e-24277.30Nitrate high affinity transporter n=4 Tax=Ectocarp... [more]
A0A812ST29_9DINO2.540e-18660.36Nitrate/nitrite transporter n=2 Tax=Symbiodinium n... [more]
A0A812SSL6_9DINO7.990e-18660.81Nitrate/nitrite transporter n=3 Tax=Symbiodinium n... [more]
A0A812SYP8_9DINO1.290e-18560.81NRT2.5 protein n=1 Tax=Symbiodinium natans TaxID=8... [more]
A0A812T2A0_9DINO5.130e-17860.81NRT2.5 protein n=3 Tax=Symbiodinium natans TaxID=8... [more]
A0A836CM93_9STRA3.360e-16855.51Nitrate high affinity transporter n=1 Tax=Tribonem... [more]
A0A835YTD5_9STRA3.950e-15953.60Nitrate high affinity transporter n=1 Tax=Tribonem... [more]
A0A835YQD5_9STRA1.980e-15652.70Nitrate high affinity transporter n=2 Tax=Tribonem... [more]
A0A1Z5K889_FISSO5.490e-14753.15Nitrate/nitrite transporter n=2 Tax=Fistulifera so... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10122contigD-mesarthrocarpus_Contig10122:2..3339 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FUS1
Preferred nameNRT2.2
PFAMsMFS_1
Model size2451
Max annot lvl2759|Eukaryota
KEGG koko:K02575
KEGG TC2.A.1.8
KEGG Pathwayko00910,map00910
KEGG ModuleM00615
Hectar predicted targeting categorysignal peptide
GOsGO:0000325,GO:0001101,GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0007275,GO:0008150,GO:0008509,GO:0009507,GO:0009536,GO:0009628,GO:0009705,GO:0009791,GO:0009987,GO:0010035,GO:0010167,GO:0015075,GO:0015103,GO:0015112,GO:0015267,GO:0015291,GO:0015318,GO:0015513,GO:0015698,GO:0015706,GO:0015707,GO:0016020,GO:0022622,GO:0022803,GO:0022804,GO:0022832,GO:0022836,GO:0022857,GO:0031090,GO:0032501,GO:0032502,GO:0032991,GO:0034220,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0048364,GO:0048527,GO:0048528,GO:0048731,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070887,GO:0071229,GO:0071241,GO:0071249,GO:0071705,GO:0071944,GO:0080167,GO:0090696,GO:0098588,GO:0098656,GO:0098805,GO:0099402,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170,GO:1990351
Exons4
Evalue2.98e-240
EggNOG OGsCOG2223@1|root,2QPIC@2759|Eukaryota
Descriptioncellular response to nitrate
Cds size1272
COG categoryP
BRITEko00000,ko00001,ko00002,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10122.1.1prot_D-mesarthrocarpus_Contig10122.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10122 69..2227 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789157.2890139-UTR-D-mesarthrocarpus_Contig10122:1..681680789157.2890139-UTR-D-mesarthrocarpus_Contig10122:1..68Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10122 2..68 +
1680789157.3653417-UTR-D-mesarthrocarpus_Contig10122:2227..33391680789157.3653417-UTR-D-mesarthrocarpus_Contig10122:2227..3339Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10122 2228..3339 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789157.3103695-CDS-D-mesarthrocarpus_Contig10122:68..4941680789157.3103695-CDS-D-mesarthrocarpus_Contig10122:68..494Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10122 69..494 +
1680789157.3247643-CDS-D-mesarthrocarpus_Contig10122:810..10201680789157.3247643-CDS-D-mesarthrocarpus_Contig10122:810..1020Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10122 811..1020 +
1680789157.3427632-CDS-D-mesarthrocarpus_Contig10122:1303..14991680789157.3427632-CDS-D-mesarthrocarpus_Contig10122:1303..1499Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10122 1304..1499 +
1680789157.3565154-CDS-D-mesarthrocarpus_Contig10122:1787..22271680789157.3565154-CDS-D-mesarthrocarpus_Contig10122:1787..2227Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10122 1788..2227 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10122.1.1

>prot_D-mesarthrocarpus_Contig10122.1.1 ID=prot_D-mesarthrocarpus_Contig10122.1.1|Name=mRNA_D-mesarthrocarpus_Contig10122.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=424bp
MRAFHFAWFGFFMAFVCWFSFAPLMTEIKEDLGMSKAEVYNANISSVSST
VLSRFIVGPLCDTFGARLISSSLLLMGAIPTFFGGLVNSAVDVAVIRFFI
GVMGATFVCTQYWSAQMFAKEIVGTANATTAGWGNLGGGVTQIFMVGIWA
AFKTAYDKETAWRLSFIVPAAIVLVVAFGQAFLADDCPKGNYKELIAHNV
MMRKSSATSFKKGYLNFNSWVMFVQYAACFGVELTINNTAAGYFTNEFGL
STEKAGLVASLFGLMNLFARSLGGIFSDTLNKRFGSGVPGMRGRFIAQWT
ALLWEGVFLCVFSRQTKLAPAIACLLLFSLGVQSAEGTSYGIVPYICPEA
TGAVSGIVGAGGNFGAVMWGLIFRFGPSLEKDVYLLLGFIVIGLSLTTPF
FKIRGYDGVFTKAQGEPDSIAEI*
back to top

mRNA from alignment at D-mesarthrocarpus_Contig10122:2..3339+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10122.1.1 ID=mRNA_D-mesarthrocarpus_Contig10122.1.1|Name=mRNA_D-mesarthrocarpus_Contig10122.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3338bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10122:2..3339+ (Discosporangium mesarthrocarpum MT17_79)
CCCCGTGGACCCCAAGCAGTCGGACAAGGCCACCTCGATCAAGCTGTTCA GCGTCCGCCGTCCGCACATGCGTGCGTTCCACTTCGCGTGGTTCGGCTTC TTCATGGCGTTCGTCTGCTGGTTTTCCTTCGCTCCCCTCATGACCGAGAT CAAGGAAGACCTCGGCATGTCTAAGGCTGAGGTGTACAATGCCAATATCT CGTCGGTGTCCTCCACCGTGTTGTCCCGGTTCATCGTCGGCCCCTTGTGC GACACCTTCGGTGCTCGTCTTATCTCGTCGTCTTTGCTGCTAATGGGTGC CATCCCCACCTTCTTCGGTGGCCTCGTTAACTCGGCTGTGGATGTGGCCG TCATCCGCTTCTTCATCGGCGTCATGGGTGCTACGTTCGTGTGCACCCAG TATTGGTCTGCCCAGATGTTTGCCAAGGAGATCGTCGGTACCGCCAACGC CACGACGGCTGGGTGGGGCAACCTTGGCGGTGGCGTTACTCAGGTACGTG GTATTTGATACGCGGTGTCTCTTTTTAGCAGAGCGTACTCGTCGAGTTGT AGATATCCATGAATCATATCCGGTAGCCTCTAACGTAGACACCTTCAGGC ACCTAGGAGGATACTCTTGAGTAATTTGTTGGTTGGTGGGGTGCATCGAA TAATTAATCTTCGACCTCTGTGCCTTCGTTGGTTGGTGGGGTGCATCGAA TAATTAATCCTCAACCTCTGTGCCTTCATGTGCTTACATGCAGCAACTGG CTGATAACCCGGTGACATGAAAACCTATGTTTATCGTTATCTTCTTTTCC CTGCTCAAGATCTTCATGGTCGGAATCTGGGCCGCTTTCAAGACCGCCTA TGACAAAGAGACGGCTTGGCGTCTGTCCTTCATCGTGCCTGCGGCCATTG TCCTGGTTGTAGCGTTTGGTCAGGCATTCCTTGCTGATGACTGCCCCAAG GGTAACTACAAGGAACTCATTGCTCACAACGTGATGATGCGGAAGAGCTC TGCCACCTCCTTTAAGAAGGTGAGAGGCTATGATGATGCTGTGGTAGTTG GTGCTGTAAGGTAAGGTGTACCTCAAATACTATCCCACAATGGACAGGTG CACCTTACAGGCTGACCCTTTCCCACGTGCGATGTGATTCGTGTCCTCGC TTCTTAAAGATTAATGATAAACGACCAGACCTGAAGCGCATTGGTGTGGC ATCCCGAGTGAAGTAAGTAAACTCAAAATACACTTTCTGACACGACAGGG TGTGCTTATCCCCTTTGTTTTCGTCTACGGCCAATGGCCACACACACCCC AGGGCTACCTCAACTTCAACTCATGGGTGATGTTTGTCCAGTATGCTGCC TGCTTCGGTGTGGAGTTGACCATCAACAACACTGCTGCTGGGTACTTTAC GAATGAATTTGGCCTTTCCACGGAGAAGGCGGGACTTGTGGCCTCTCTGT TTGGTCTCATGAACCTCTTTGCTCGCTCCCTGGGGGGCATCTTTTCTGGT AAGTAGATGTGATTATGTTTTGCTTTGTCAAAGTTTTGCCGGTATTGTGA CGAAAAACTGTGGGGCTTTGGATTTTAAATGTGCTCGTTCCTACTGTGTA TAGTTGAACTAGAAGTGAAACACAAATACTTGAAAGTATGGTATCTGAGA TAATGTTTTGGGTTGTTTTCCTGAGTATAAACACCGTGTTTAGCTTCCAT AACTTTTACGTTTTGTAATGTGTGAACTAACCTTTTTTTTTTCATATACA CCCTTTCCTCTGTCCTTGTCCTCTTTACTGTTGAAGACACCCTGAACAAG CGGTTTGGCAGTGGTGTCCCTGGCATGCGTGGGCGTTTTATCGCTCAGTG GACTGCCCTGCTGTGGGAGGGAGTGTTCCTCTGTGTCTTCTCTCGCCAGA CTAAGTTGGCCCCTGCTATTGCCTGCCTGCTTCTCTTCTCTCTTGGTGTG CAGTCAGCAGAGGGCACCAGCTACGGCATTGTGCCGTACATTTGCCCCGA GGCAACTGGTGCGGTTTCTGGGATTGTGGGTGCTGGGGGCAACTTTGGTG CAGTGATGTGGGGTCTGATCTTCCGCTTTGGTCCTTCACTAGAGAAGGAC GTATACCTTCTTTTGGGCTTTATTGTCATTGGTCTGTCTCTTACTACCCC CTTCTTCAAAATCCGTGGTTATGATGGTGTGTTCACCAAGGCCCAGGGTG AGCCTGACTCTATTGCAGAGATCTAAGCCCAAATTGCTGTTAGATTGGGG TGGAGTGCCTCAGGACAAGAGTAGTAGATTTGAGTGTATACTGCCATTTT TGTGTGTGGGCACAAACTGAAAAAATTAGCCTATAAATTCAGAGTCGTAC AAAATCCTCTTTTGTTTTATGGTAGCGGCCATATCGAGGATGATGATGAA GCTGCCTTCCTCTGTTAGGAGGGTGTAAGCTGTCTTAAGGTTGAACTCAC TGGCATGTAGAAGGTTTTGTATCGTGAATTCCCTGAGCTGGATTTATGGG ACCTTGAAACAAGGTTTGCTGTTGGTGCATTGATTGCTATTTTCAAGGAA TCTTTCAGGAAGGATCTTGATCTGTATATGGACCAATCATGCCAACCCTG CGCATAACCATACCGGGTTTATTCTGGGCTGGTACATATACTCTGTCCCA GGTCCAGAGTAGCAATGCATTCCCTTTGTTGTTTGTGATGCTGTACTAAC CTTTCAGGGTGTTCCTTTTTTTGTTCACTTGATTACCTTGATACTCTGAT TGTTTTTGAAGTTGGGCTGCGGGTTGTGTCCTATGGGAGTTCGGGCAACA TGAGCTTTTCAGGAAGAATGTAATAGTTTTATCTATATAGTTTTTTACAG TGCTTCAGAGTACAACTTCGTGGGTATAATGGTACACTGCAGGAATCAAA AATTCGGTGCTTACTTTTAGTGAGTAGTCAGAGGTACCTGCTATGCACAG CTATAACAGTTGTTGGAAGAGAAGATGAACGTACTGGCAGAGAGGAGGTT GCCTTGCATTAAATGTAAAACAATTGAATTCAACATCATGGTCAATCTTG GAGCTGTACAAGGAAGAGCAAAGGCGGGGGAAGGATGCTGAGGTGGGGAA GGACATCACATTATATTTGTCTAACCTGGGGCTCTTAAAGGCCCAAGCCA CCTATGCTAGGTGTGTGCAAGAGAAAGATGAGCAGTCCTGACAATGGAAG CCTTAGCACAAAAATGGGAAACCTACAGCCAACAAAATCTGGGCAGCAAG TACTAATAACATTTTTGTGATCTGATTCAATTCAAATTTCAAATTTAGGC TCCTAATTTTAAGCTAAGGGATGGTGGAGGGAAGAGTG
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10122:2..3339+

>mRNA_D-mesarthrocarpus_Contig10122.1.1 ID=mRNA_D-mesarthrocarpus_Contig10122.1.1|Name=mRNA_D-mesarthrocarpus_Contig10122.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1272bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10122:2..3339+ (Discosporangium mesarthrocarpum MT17_79)
ATGCGTGCGTTCCACTTCGCGTGGTTCGGCTTCTTCATGGCGTTCGTCTG
CTGGTTTTCCTTCGCTCCCCTCATGACCGAGATCAAGGAAGACCTCGGCA
TGTCTAAGGCTGAGGTGTACAATGCCAATATCTCGTCGGTGTCCTCCACC
GTGTTGTCCCGGTTCATCGTCGGCCCCTTGTGCGACACCTTCGGTGCTCG
TCTTATCTCGTCGTCTTTGCTGCTAATGGGTGCCATCCCCACCTTCTTCG
GTGGCCTCGTTAACTCGGCTGTGGATGTGGCCGTCATCCGCTTCTTCATC
GGCGTCATGGGTGCTACGTTCGTGTGCACCCAGTATTGGTCTGCCCAGAT
GTTTGCCAAGGAGATCGTCGGTACCGCCAACGCCACGACGGCTGGGTGGG
GCAACCTTGGCGGTGGCGTTACTCAGATCTTCATGGTCGGAATCTGGGCC
GCTTTCAAGACCGCCTATGACAAAGAGACGGCTTGGCGTCTGTCCTTCAT
CGTGCCTGCGGCCATTGTCCTGGTTGTAGCGTTTGGTCAGGCATTCCTTG
CTGATGACTGCCCCAAGGGTAACTACAAGGAACTCATTGCTCACAACGTG
ATGATGCGGAAGAGCTCTGCCACCTCCTTTAAGAAGGGCTACCTCAACTT
CAACTCATGGGTGATGTTTGTCCAGTATGCTGCCTGCTTCGGTGTGGAGT
TGACCATCAACAACACTGCTGCTGGGTACTTTACGAATGAATTTGGCCTT
TCCACGGAGAAGGCGGGACTTGTGGCCTCTCTGTTTGGTCTCATGAACCT
CTTTGCTCGCTCCCTGGGGGGCATCTTTTCTGACACCCTGAACAAGCGGT
TTGGCAGTGGTGTCCCTGGCATGCGTGGGCGTTTTATCGCTCAGTGGACT
GCCCTGCTGTGGGAGGGAGTGTTCCTCTGTGTCTTCTCTCGCCAGACTAA
GTTGGCCCCTGCTATTGCCTGCCTGCTTCTCTTCTCTCTTGGTGTGCAGT
CAGCAGAGGGCACCAGCTACGGCATTGTGCCGTACATTTGCCCCGAGGCA
ACTGGTGCGGTTTCTGGGATTGTGGGTGCTGGGGGCAACTTTGGTGCAGT
GATGTGGGGTCTGATCTTCCGCTTTGGTCCTTCACTAGAGAAGGACGTAT
ACCTTCTTTTGGGCTTTATTGTCATTGGTCTGTCTCTTACTACCCCCTTC
TTCAAAATCCGTGGTTATGATGGTGTGTTCACCAAGGCCCAGGGTGAGCC
TGACTCTATTGCAGAGATCTAA
back to top