mRNA_D-mesarthrocarpus_Contig10120.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10120.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10120.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10120.1.1 vs. uniprot
Match: D8LCY7_ECTSI (Long-chain-fatty-acid--CoA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY7_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 7.140e-10
Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:    4 KVKAIHLEPNPFSVENNMLTPTFKLKRAEAQATYYGVIKSLYESI 138
            KV+AIHLEP+PFS +N +LTPTFKLKRA+A   Y  VI +LY  +
Sbjct:  606 KVRAIHLEPDPFSAQNGLLTPTFKLKRAQALEAYSKVIAALYAGL 650
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BLAST of mRNA_D-mesarthrocarpus_Contig10120.1.1 vs. uniprot
Match: A0A1W0ABM4_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABM4_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 9.750e-10
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 1 
Query:    7 VKAIHLEPNPFSVENNMLTPTFKLKRAEAQATYYGVIKSLYE 132
            V+AIHL P  FSVEN+MLTPTFKLKR +A+  + G+I SLYE
Sbjct:  653 VRAIHLHPERFSVENDMLTPTFKLKRNDAKKAFIGIIDSLYE 694
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BLAST of mRNA_D-mesarthrocarpus_Contig10120.1.1 vs. uniprot
Match: A0A0A7CLL0_9STRA (Secreted protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A0A7CLL0_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 9.760e-10
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 1 
Query:    7 VKAIHLEPNPFSVENNMLTPTFKLKRAEAQATYYGVIKSLYE 132
            V+AIHL P  FSVEN+MLTPTFKLKR +A+  + G+I SLYE
Sbjct:  653 VRAIHLHPERFSVENDMLTPTFKLKRNDAKKAFIGIIDSLYE 694
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BLAST of mRNA_D-mesarthrocarpus_Contig10120.1.1 vs. uniprot
Match: A0A7S0URD6_9CHLO (Hypothetical protein n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0URD6_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 1.330e-9
Identity = 28/45 (62.22%), Postives = 34/45 (75.56%), Query Frame = 1 
Query:    4 KVKAIHLEPNPFSVENNMLTPTFKLKRAEAQATYYGVIKSLYESI 138
            +VKAIHL P PFSVEN +LTPTFKLKR +A+A +   IK +Y  I
Sbjct:  665 QVKAIHLHPEPFSVENGLLTPTFKLKRPQAKAAFEEQIKRMYSKI 709
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BLAST of mRNA_D-mesarthrocarpus_Contig10120.1.1 vs. uniprot
Match: A0A0L0HCT3_SPIPD (Long-chain-fatty-acid--CoA ligase n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HCT3_SPIPD)

HSP 1 Score: 60.1 bits (144), Expect = 2.490e-9
Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 1 
Query:    7 VKAIHLEPNPFSVENNMLTPTFKLKRAEAQATYYGVIKSLYESI 138
            VKAIHLEP  +SV+NNM+TPTFKLKR EA   Y  +I +LYE +
Sbjct:  661 VKAIHLEPEVWSVDNNMMTPTFKLKRNEAADKYRPIIDALYEEV 704
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BLAST of mRNA_D-mesarthrocarpus_Contig10120.1.1 vs. uniprot
Match: A0A1V9YF94_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YF94_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.490e-9
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 1 
Query:    7 VKAIHLEPNPFSVENNMLTPTFKLKRAEAQATYYGVIKSLY 129
            ++A+HLEP PFS+ENN+LTPT KLKR +A  TY G I  LY
Sbjct:  615 IRAVHLEPTPFSIENNLLTPTLKLKRHDATKTYAGKIDVLY 655
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BLAST of mRNA_D-mesarthrocarpus_Contig10120.1.1 vs. uniprot
Match: A0A1V9YUQ7_9STRA (Long-chain-fatty-acid--CoA ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YUQ7_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.660e-9
Identity = 25/44 (56.82%), Postives = 34/44 (77.27%), Query Frame = 1 
Query:    7 VKAIHLEPNPFSVENNMLTPTFKLKRAEAQATYYGVIKSLYESI 138
            ++A+HLEP PFS+ENN+LTPT KLKR +A  TY   I +LY ++
Sbjct:  652 IRAVHLEPTPFSIENNLLTPTLKLKRHDATKTYAAQIDALYVAL 695
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BLAST of mRNA_D-mesarthrocarpus_Contig10120.1.1 vs. uniprot
Match: A0A8H7EQZ6_9FUNG (Long-chain-fatty-acid--CoA ligase n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7EQZ6_9FUNG)

HSP 1 Score: 59.3 bits (142), Expect = 4.660e-9
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 1 
Query:   10 KAIHLEPNPFSVENNMLTPTFKLKRAEAQATYYGVIKSLYESI 138
            +AI LEP PFS+ENN+LTPTFK+KRA+A+  Y   I+ LYE I
Sbjct:  621 RAIFLEPEPFSIENNLLTPTFKIKRAQAKQHYQIQIEKLYEQI 663
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BLAST of mRNA_D-mesarthrocarpus_Contig10120.1.1 vs. uniprot
Match: A0A4W5L5L8_9TELE (Uncharacterized protein n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5L5L8_9TELE)

HSP 1 Score: 58.2 bits (139), Expect = 5.450e-9
Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 1 
Query:    7 VKAIHLEPNPFSVENNMLTPTFKLKRAEAQATYYGVIKSLYES 135
            V+A+ LEP PFSVEN +LTPTFKLKR +A+A Y  VI  LY S
Sbjct:  154 VRAVQLEPMPFSVENGLLTPTFKLKRHDAKALYAKVIDPLYAS 196
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BLAST of mRNA_D-mesarthrocarpus_Contig10120.1.1 vs. uniprot
Match: UPI00053B9F31 (long chain acyl-CoA synthetase 2-like n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00053B9F31)

HSP 1 Score: 56.6 bits (135), Expect = 9.710e-9
Identity = 23/41 (56.10%), Postives = 31/41 (75.61%), Query Frame = 1 
Query:    7 VKAIHLEPNPFSVENNMLTPTFKLKRAEAQATYYGVIKSLY 129
            +KAIHLEPNPF +E +++TPTFKLKR +    Y G++  LY
Sbjct:  105 LKAIHLEPNPFDIERDLITPTFKLKRPQLLQHYKGIVDQLY 145
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10120.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCY7_ECTSI7.140e-1062.22Long-chain-fatty-acid--CoA ligase n=1 Tax=Ectocarp... [more]
A0A1W0ABM4_9STRA9.750e-1066.67Long-chain-fatty-acid--CoA ligase n=1 Tax=Thrausto... [more]
A0A0A7CLL0_9STRA9.760e-1066.67Secreted protein n=1 Tax=Thraustotheca clavata Tax... [more]
A0A7S0URD6_9CHLO1.330e-962.22Hypothetical protein n=1 Tax=Polytomella parva Tax... [more]
A0A0L0HCT3_SPIPD2.490e-963.64Long-chain-fatty-acid--CoA ligase n=2 Tax=Spizello... [more]
A0A1V9YF94_9STRA2.490e-963.41Long-chain-fatty-acid--CoA ligase n=1 Tax=Achlya h... [more]
A0A1V9YUQ7_9STRA4.660e-956.82Long-chain-fatty-acid--CoA ligase n=1 Tax=Achlya h... [more]
A0A8H7EQZ6_9FUNG4.660e-962.79Long-chain-fatty-acid--CoA ligase n=1 Tax=Apophyso... [more]
A0A4W5L5L8_9TELE5.450e-965.12Uncharacterized protein n=1 Tax=Hucho hucho TaxID=... [more]
UPI00053B9F319.710e-956.10long chain acyl-CoA synthetase 2-like n=1 Tax=Came... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10120contigD-mesarthrocarpus_Contig10120:442..579 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog109760.SPPG_06233T0
Preferred nameFAA2
PFAMsAMP-binding
Model size138
Max annot lvl4751|Fungi
KEGG rclassRC00004,RC00014
KEGG koko:K01897
KEGG TC4.C.1.1
KEGG ReactionR01280
KEGG Pathwayko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920
KEGG ModuleM00086
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0001676,GO:0003674,GO:0003824,GO:0004467,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0015645,GO:0016405,GO:0016874,GO:0016877,GO:0016878,GO:0019752,GO:0031956,GO:0031957,GO:0032787,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0071704
Exons1
Evalue4.09e-10
EggNOG OGsCOG1022@1|root,KOG1256@2759|Eukaryota,38BK9@33154|Opisthokonta,3NUAR@4751|Fungi
EC6.2.1.3
Descriptionacyl-CoA synthetase
Cds size138
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789157.21533-CDS-D-mesarthrocarpus_Contig10120:441..5791680789157.21533-CDS-D-mesarthrocarpus_Contig10120:441..579Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10120 442..579 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10120.1.1prot_D-mesarthrocarpus_Contig10120.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10120 442..579 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10120.1.1

>prot_D-mesarthrocarpus_Contig10120.1.1 ID=prot_D-mesarthrocarpus_Contig10120.1.1|Name=mRNA_D-mesarthrocarpus_Contig10120.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=46bp
MKVKAIHLEPNPFSVENNMLTPTFKLKRAEAQATYYGVIKSLYESI
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mRNA from alignment at D-mesarthrocarpus_Contig10120:442..579+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10120.1.1 ID=mRNA_D-mesarthrocarpus_Contig10120.1.1|Name=mRNA_D-mesarthrocarpus_Contig10120.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=138bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10120:442..579+ (Discosporangium mesarthrocarpum MT17_79)
ATGAAGGTCAAGGCCATCCACCTGGAGCCCAACCCCTTCAGCGTAGAGAA
CAACATGCTCACGCCTACTTTCAAGCTCAAGCGCGCCGAGGCACAAGCAA
CGTATTACGGGGTCATCAAGTCTCTGTACGAATCCATC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10120:442..579+

>mRNA_D-mesarthrocarpus_Contig10120.1.1 ID=mRNA_D-mesarthrocarpus_Contig10120.1.1|Name=mRNA_D-mesarthrocarpus_Contig10120.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=138bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10120:442..579+ (Discosporangium mesarthrocarpum MT17_79)
ATGAAGGTCAAGGCCATCCACCTGGAGCCCAACCCCTTCAGCGTAGAGAA
CAACATGCTCACGCCTACTTTCAAGCTCAAGCGCGCCGAGGCACAAGCAA
CGTATTACGGGGTCATCAAGTCTCTGTACGAATCCATC
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