mRNA_D-mesarthrocarpus_Contig1011.7.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1011.7.1
Unique NamemRNA_D-mesarthrocarpus_Contig1011.7.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1011.7.1 vs. uniprot
Match: D7G8R0_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R0_ECTSI)

HSP 1 Score: 565 bits (1457), Expect = 3.830e-198
Identity = 277/375 (73.87%), Postives = 315/375 (84.00%), Query Frame = 1
Query:  217 AGIKSLAGISWKVKRGNLWDSVVPIVNPEKLVLYIVFQIVYARALRLLYQVQIQVWRLVRKHDPPPYSESVLGFLEPRLHMLSRVLALVYLLNGAVGIMIASGWNIQPSLAKVMSDVIYCWYMGYFIDKAKQFTLPVWIPSLRADKRKGFIYNRSLSVFTWSVCALYVVEIISVFLRIPITSTLAFGGIGGLAFGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRLRGRDTRPTYVPNSVFVDSMVTNMDRITHRKFETNFELRYDDLPKVTAIVQGIRAALKEVPNIDLLSPFRVHLVDFSPSGLKFTVVCYFATKSFDEFLYLQQVTLLEVARVADEAGATMMSVYHLDMSNP 1341
            A + S+AG+  K      W  +  +V P+KL L+++FQIVY R LRLLY++Q+QVWRLVRKHDP PY +SVLGF+EPRL  LSR L + Y L   V ++IASGWN  P LAKV+SDV+YCWY GYF+D+AK+F LPVWIPSL+ADKRKGFIYNRSLSV TWS+C L V E+IS +LRIPITSTLAFGGIGGLA GLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQR GVRCEGRVERVGWYQTRLRGRDTRPTYVPN +F D+MVTNMDRITHRKFE++F+LRY D PKV  I+QGI+ ALK+VPNIDLLSPFRVHLVDF+ SGLK  VVCYFATKSFDEFLYLQQV LLEV RV   A ATM SV ++DM+NP
Sbjct:    9 AQLWSIAGL--KAAGARFWGPLTNVVTPQKLFLFLLFQIVYRRLLRLLYRLQVQVWRLVRKHDPQPYEQSVLGFVEPRLRTLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKTALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGASATMTSVLYVDMNNP 381          
BLAST of mRNA_D-mesarthrocarpus_Contig1011.7.1 vs. uniprot
Match: A0A4D9D8J2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8J2_9STRA)

HSP 1 Score: 357 bits (917), Expect = 1.700e-115
Identity = 175/350 (50.00%), Postives = 242/350 (69.14%), Query Frame = 1
Query:  289 IVNPEKLVLYIVFQIVYARALRLLYQVQIQVWRLVRKHDPPP-YSESVLGFLEPRLHMLSRVLALVYLLNGAVGIMIASGWNIQPSLAKVMSDVIYCWYMGYFIDKAKQFTLPVWIPSLRADKRKGFIYNRSLSVFTWSVCALYVVEIISVFLRIPITSTLAFGGIGGLAFGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRLRGRDTRPTYVPNSVFVDSMVTNMDRITHRKFETNFELRYDDLPKVTAIVQGIRAALKEVPNIDLLSPFRVHLVDFSPSGLKFTVVCYFATKSFDEFLYLQQVTLLEVARVADEAGATMM-SVYHLDM 1332
            ++NP  L+L++  +++Y +A R L+     +W+     D P  Y +SVLGF+EP+L  L+  + + Y++N  + ++I  GW ++   A++M+ ++Y  Y  YF+++ K+  L  W+PSL+ D+R+ +I +RS SV  W +     +E IS FL+IP++STLAFGGIGGLAFGLA KDV+SNFFGG+MLL  EPF PGDMV+F   G   EG+VERVG+YQTRLRGRDTRPTYVPNSVFVD+MVTNMDRITHR+FE +F LR+ D   +  ++  I+ AL+ +P +D+LSPFRVH   F    L  T  CYFATKS DE+LYLQQ+ L+E+ RV  E G        HLD+
Sbjct:    9 LINPSDLLLFVTTRLLYRKACRALHAFHHFLWKRAGILDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDIGWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDL 358          
BLAST of mRNA_D-mesarthrocarpus_Contig1011.7.1 vs. uniprot
Match: W7UBI9_9STRA (Small-conductance mechanosensitive channel n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBI9_9STRA)

HSP 1 Score: 358 bits (918), Expect = 2.450e-113
Identity = 175/350 (50.00%), Postives = 242/350 (69.14%), Query Frame = 1
Query:  289 IVNPEKLVLYIVFQIVYARALRLLYQVQIQVWRLVRKHDPPP-YSESVLGFLEPRLHMLSRVLALVYLLNGAVGIMIASGWNIQPSLAKVMSDVIYCWYMGYFIDKAKQFTLPVWIPSLRADKRKGFIYNRSLSVFTWSVCALYVVEIISVFLRIPITSTLAFGGIGGLAFGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRLRGRDTRPTYVPNSVFVDSMVTNMDRITHRKFETNFELRYDDLPKVTAIVQGIRAALKEVPNIDLLSPFRVHLVDFSPSGLKFTVVCYFATKSFDEFLYLQQVTLLEVARVADEAGATMM-SVYHLDM 1332
            ++NP  L+L++  +++Y +A R L+     +W+     D P  Y +SVLGF+EP+L  L+  + + Y++N  + ++I  GW ++   A++M+ ++Y  Y  YF+++ K+  L  W+PSL+ D+R+ +I +RS SV  W +     +E IS FL+IP++STLAFGGIGGLAFGLA KDV+SNFFGG+MLL  EPF PGDMV+F   G   EG+VERVG+YQTRLRGRDTRPTYVPNSVFVD+MVTNMDRITHR+FE +F LR+ D   +  ++  I+ AL+ +P +D+LSPFRVH   F    L  T  CYFATKS DE+LYLQQ+ L+E+ RV  E G        HLD+
Sbjct:  199 LINPSDLLLFVTTRLLYRKACRALHAFHHFLWKRAGIMDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDIGWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDL 548          
BLAST of mRNA_D-mesarthrocarpus_Contig1011.7.1 vs. uniprot
Match: A0A6U0TNP3_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TNP3_9STRA)

HSP 1 Score: 348 bits (892), Expect = 4.280e-111
Identity = 173/352 (49.15%), Postives = 241/352 (68.47%), Query Frame = 1
Query:  265 NLWDSVVP----IVNPEKLVLYIVFQIVYARALRLLYQVQIQVWRLVRKHDPPP-YSESVLGFLEPRLHMLSRVLALVYLLNGAVGIMIASGWNIQPSLAKVMSDVIYCWYMGYFIDKAKQFTLPVWIPSLRADKRKGFIYNRSLSVFTWSVCALYVVEIISVFLRIPITSTLAFGGIGGLAFGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRLRGRDTRPTYVPNSVFVDSMVTNMDRITHRKFETNFELRYDDLPKVTAIVQGIRAALKEVPNIDLLSPFRVHLVDFSPSGLKFTVVCYFATKSFDEFLYLQQVTLLEVARVADEAGAT 1305
            N+W  V      ++ P  L+ Y++F+  Y+RALRL Y +Q  + RL++K  PPP Y ++VLGFLEPR   LSR+  L+YL+N ++  +     NI+P L ++ + + Y  Y GYF+++ ++F  P W P L  DKR+ +I +RS SVF W++  + +++ IS F  +P++S+LA GG+GG+A GLA KDV+SNF GGLMLL+ EPF PGD +TF   G    G+VERVGWYQTR+R RDTRP YVPN+ FV++MVTNMDRITHRKFE+ F ++ D   +V  ++  I+ AL+  P +DLLSPFR +L+     GL+F+V+CYFATKS DEFL LQQ   LEV R  +  G T
Sbjct:   69 NVWAEVPTPLRVLMRPRDLLAYLIFRTCYSRALRLGYLLQTLLSRLLKKDIPPPAYLQTVLGFLEPRFAQLSRLTGLIYLVNVSISAIGLIDLNIRPGLDRLFTKLAYTAYAGYFLNEVRRFVTPRWFPKLAEDKRRAYIVDRSASVFFWTITIVLLLDQISTFFNVPLSSSLALGGVGGVAIGLASKDVVSNFVGGLMLLITEPFTPGDFITFLYQGQWMIGKVERVGWYQTRIRNRDTRPVYVPNAFFVNTMVTNMDRITHRKFESEFHIQLDSFAQVEGLLDDIKIALQGFPKLDLLSPFRANLIAVESDGLRFSVLCYFATKSLDEFLMLQQKVFLEVGRCVESRGLT 420          
BLAST of mRNA_D-mesarthrocarpus_Contig1011.7.1 vs. uniprot
Match: A0A835ZID6_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZID6_9STRA)

HSP 1 Score: 261 bits (667), Expect = 1.490e-75
Identity = 136/272 (50.00%), Postives = 182/272 (66.91%), Query Frame = 1
Query:  289 IVNPEKLVLYIVFQIVYARALRLLYQVQIQVWRLVRKHDPP-------PYSESVLGFLEPRLHMLSRVLALVYLLNGAVGIMIASGWNIQPSLAKVMSDVIYCWYMGYFIDKAK----------------QFTLPVWIPSLRADKRKGFIYNRSLSVFTWSVCALYVVEIISVFLRIPITSTLAFGGIGGLAFGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRLRGRDTRPTYVPNSVFVDSMVTNMDRIT 1035
            ++NP  L L++ F +VY +ALR++Y +Q +  R +             P+ +S LGFLEPRL  L+RV+A +Y+ NGA+G +   G+ ++P     +S V+   Y GYFID+ K                QF LPV  P L+ D RK FIYNR+ SV TW++ AL ++++IS FL IP+ ST+AFGG GG+AFG A K +  NFFGGL LLL+EPF+PGDMV F+  G   EGRVERVGWYQTRLRGRDTRPTY+PN+VF+ ++VTNMDRI+
Sbjct:  208 LINPRDLALFVGFYLVYKKALRVIYGLQAKAMRAMASRSGSGAPAAVKPFEQSWLGFLEPRLRSLTRVMAGLYVANGALGGLANLGYRLRPGTQDFVSTVVATLYAGYFIDELKRQQRSRDAFCCLSCAPQFYLPVIWPELQNDMRKAFIYNRTTSVLTWTLVALGLLQVISAFLHIPLASTMAFGGAGGIAFGFAAKGIFENFFGGLTLLLSEPFVPGDMVHFEYGGEVMEGRVERVGWYQTRLRGRDTRPTYIPNNVFLSNLVTNMDRIS 479          
BLAST of mRNA_D-mesarthrocarpus_Contig1011.7.1 vs. uniprot
Match: A0A7S0SR49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR49_9STRA)

HSP 1 Score: 246 bits (628), Expect = 2.900e-74
Identity = 125/272 (45.96%), Postives = 176/272 (64.71%), Query Frame = 1
Query:  529 NIQPSLAKVMSDVIYCWYMGYFIDKAKQFTLPVWIPSLRADKRKGFIYNRSLSVFTWSVCALYVVEIISVFLRIPITSTLAFGGIGGLAFGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRLRGRDTRPTYVPNSVFVDSMVTNMDRITHRKFETNFELRYDDLPKVTAIVQGIRAALKEVPNIDLLS-PFRVHLVDFSPSGLKFTVVCYFATKSFDEFLYLQQVTLLEVARVADEAGATM-MSVYHLDMSN 1338
            +++P    +++ V Y  Y+  F D  K   L +++P+L A++R+ ++  RS SV  W V  L   E++S +L++P++STLAFGG GGLA GL+ +DV +NF GG++LL  EPF PGDMVTF+       GRVERVGW QTR+RGRDTRPTYVPNS FV + VTNM+RITHRKFE    LRY D   ++ +V  I+  L+++P +D ++ PFR   V      L   V CYF+TKS DEFL LQQ   LE+ +      A++ +  +H+ + N
Sbjct:   20 SVKPDFHIIVARVSYAIYLTNFFDMFKLKFLNLFLPNLNANRRQSYVVQRSSSVILWVVGVLIACEMVSTYLKVPLSSTLAFGGFGGLALGLSARDVAANFLGGILLLFNEPFTPGDMVTFRSGNTELLGRVERVGWGQTRIRGRDTRPTYVPNSHFVQTAVTNMERITHRKFEAIVPLRYQDHAVMSDVVTKIKEGLRKIPKLDTMTQPFRCSFVKVGSYSLDIEVTCYFSTKSIDEFLPLQQAANLEIIKAVYSCNASLALPTHHIVLPN 291          
BLAST of mRNA_D-mesarthrocarpus_Contig1011.7.1 vs. uniprot
Match: A0A6H5L1M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1M0_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 1.540e-66
Identity = 114/165 (69.09%), Postives = 124/165 (75.15%), Query Frame = 1
Query:  625 VWIPSLRADKRKGFIYNRSLSVFTWSVCALYVVEIISVFLRIPITSTLAFGGIGGLAFGLAGK-------------------------------DVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRLRGRDTRPTYVPNSVFVDSMVTNMD 1026
            +WIPSL+ADKRKGFIYNRSLSV TWS+C L V E+IS +LRIPITSTLAFGGIGGLA GLAGK                               DVLSNFFGGLMLLLAEPFIPGDMVTFQR GVRCEGRVERVGWYQTRLRGRDTRPTYVPN +F D+MV++ +
Sbjct:    1 MWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKEALFVACVGIHGPRSPPLRSSLAVVCSVAKKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVSSRE 165          
BLAST of mRNA_D-mesarthrocarpus_Contig1011.7.1 vs. uniprot
Match: UPI0011848E02 (mechanosensitive ion channel family protein n=1 Tax=Pleionea sediminis TaxID=2569479 RepID=UPI0011848E02)

HSP 1 Score: 156 bits (394), Expect = 1.130e-39
Identity = 96/276 (34.78%), Postives = 151/276 (54.71%), Query Frame = 1
Query:  523 GWNIQPSLAKVMSDVIYCWYMGYFIDKAKQFTLPVWIPSLRADKRKGFIYNRSLSVFTWSVCALYVVEIISVFLRIPITSTLAFGGIGGLAFGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRLRGRDTRPTYVPNSVFVDSMVTNMDRITHRKFETNFELRYDDLPKVTAIVQGIRAALKEVPNIDLLSPFRVHLVDFSPSGLKFTVVCYFATKSFDEFLYLQQVTLLEVARVADEAGATMM---SVYHLDMSNP 1341
            G N    + +V+   ++ W++  FI K++Q  +   +     D+R       ++S        + VV +I   + + I++ LAFGGIGG+A G A KD+L+NFFGGLM+ L  PF  GD V      +  EG +E +GW QTR+R  D RP YVPN+VF +  V N  R+T+R+      +RYDD+  + +IV  +   L+   +I+      V+   FS S + F + C+  TK + EF  ++Q  LL++A + D+AGA +    S  H++MS P
Sbjct:  104 GQNQAVMINEVILIGLFGWFLTRFIRKSEQHLIAHQVDK-EEDERIDHTTIEAISKLLRVSVTITVVLVILQTIGVSISAVLAFGGIGGIAIGFAAKDLLANFFGGLMIYLDRPFSHGDWVRSPDRNI--EGTIEHIGWRQTRIRTFDKRPLYVPNAVFNNIAVENPSRMTNRRIYETVGIRYDDIGAMKSIVDQVTDMLRSHEDIEQSKTLIVNFNAFSASSIDFFIYCFTKTKDWVEFHAVKQDVLLKIADIIDQAGAEIAFPTSTLHVNMSQP 376          
BLAST of mRNA_D-mesarthrocarpus_Contig1011.7.1 vs. uniprot
Match: A0A0W0ZD01_9GAMM (Small-conductance mechanosensitive channel n=1 Tax=Legionella steelei TaxID=947033 RepID=A0A0W0ZD01_9GAMM)

HSP 1 Score: 148 bits (374), Expect = 3.870e-37
Identity = 88/250 (35.20%), Postives = 130/250 (52.00%), Query Frame = 1
Query:  553 VMSDVIYCWYMGYFIDKAKQFTLPVWIPSLRADKRKGFIYNRSLSVFTWSVCALYVVEIISVFLRIPITSTLAFGGIGGLAFGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRLRGRDTRPTYVPNSVFVDSMVTNMDRITHRKFETNFELRYDDLPKVTAIVQGIRAALKEVPNIDLLSPFRVHLVDFSPSGLKFTVVCYFATKSFDEFLYLQQVTLLEVARVADEAGA 1302
            V+  +I CW +  FI + +   +   I + +   +        LS+F   +  L +V  I   + IPI   LAFGGIGG +   A K++L+NFFGGL++ + +PF  GD +      +  EG VE +GW  TR+R  D RP YVPNSVF+   V N  R+ HR+ + N  +RY D  K+ AI + IR  L +   ID      V L++F+PS L   V  Y     +D+F  +Q   L+ +  +  E GA
Sbjct:   93 VLIIIILCWALVRFIRRLEALYIQARIKNNKVIDKTLIHALSQLSIFITCILGLLIVLQI---MNIPIAGLLAFGGIGGASIAFASKELLANFFGGLIIYMDKPFKVGDWIRSPDKNI--EGIVEYIGWRMTRIRTFDKRPLYVPNSVFLTISVENPSRMQHRRVKANIGIRYQDSDKINAISKQIREMLLQHKEIDSSQSLTVSLIEFAPSALNIMVSAYSKMTKWDQFQIIQHEILMNILNIITENGA 337          
BLAST of mRNA_D-mesarthrocarpus_Contig1011.7.1 vs. uniprot
Match: A0A1D8K7W0_9GAMM (Mechanosensitive ion channel protein MscS n=2 Tax=Acidihalobacter aeolianus TaxID=2792603 RepID=A0A1D8K7W0_9GAMM)

HSP 1 Score: 147 bits (371), Expect = 1.090e-36
Identity = 78/187 (41.71%), Postives = 106/187 (56.68%), Query Frame = 1
Query:  742 LRIPITSTLAFGGIGGLAFGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRNGVRCEGRVERVGWYQTRLRGRDTRPTYVPNSVFVDSMVTNMDRITHRKFETNFELRYDDLPKVTAIVQGIRAALKEVPNIDLLSPFRVHLVDFSPSGLKFTVVCYFATKSFDEFLYLQQVTLLEVARVADEAGA 1302
            L   I+  LAFGGIGG+A G A KD+L+NFFGGLML L  PF  GD ++     +  EG VE +GW  TR+R  D RP YVPNS+F    V N  R+THR+      +RYDDL  +  IVQ +   L+   +ID      V+   F  S   F + C+  T  + E+L ++Q  +LE+A + +  GA
Sbjct:  146 LGFSISGVLAFGGIGGIAIGFAAKDILANFFGGLMLYLDRPFAVGDWISSPDRDI--EGTVEDIGWRLTRIRRFDKRPVYVPNSMFASMAVVNPSRMTHRRIYETVGIRYDDLAVLGRIVQAVETMLRARQDIDTEQTLMVYFNGFRDSSCDFMIYCFTRTTQWAEYLAVRQAVMLEIAEIVERYGA 330          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1011.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8R0_ECTSI3.830e-19873.87Small Conductance Mechanosensitive Ion channel n=1... [more]
A0A4D9D8J2_9STRA1.700e-11550.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7UBI9_9STRA2.450e-11350.00Small-conductance mechanosensitive channel n=1 Tax... [more]
A0A6U0TNP3_9STRA4.280e-11149.15Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A835ZID6_9STRA1.490e-7550.00Mechanosensitive ion channel-domain-containing pro... [more]
A0A7S0SR49_9STRA2.900e-7445.96Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A6H5L1M0_9PHAE1.540e-6669.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0011848E021.130e-3934.78mechanosensitive ion channel family protein n=1 Ta... [more]
A0A0W0ZD01_9GAMM3.870e-3735.20Small-conductance mechanosensitive channel n=1 Tax... [more]
A0A1D8K7W0_9GAMM1.090e-3641.71Mechanosensitive ion channel protein MscS n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1011contigD-mesarthrocarpus_Contig1011:16811..22753 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog557598.LHK_02965
Preferred nameynaI
PFAMsMS_channel
Model size1343
Max annot lvl28216|Betaproteobacteria
KEGG koko:K16052
KEGG TC1.A.23.4
Hectar predicted targeting categoryother localisation
Exons11
Evalue2.64e-36
EggNOG OGsCOG0668@1|root,COG0668@2|Bacteria,1MXD2@1224|Proteobacteria,2VJCC@28216|Betaproteobacteria
Ec32 ortholog descriptionSmall Conductance Mechanosensitive Ion channel
Ec32 orthologEc-22_002670.1
Descriptionmechanosensitive ion channel
Cds size1341
COG categoryM
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1011.7.1prot_D-mesarthrocarpus_Contig1011.7.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1011 16811..22753 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789156.4952304-CDS-D-mesarthrocarpus_Contig1011:16810..168901680789156.4952304-CDS-D-mesarthrocarpus_Contig1011:16810..16890Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1011 16811..16890 -
1680789156.5133457-CDS-D-mesarthrocarpus_Contig1011:17355..175491680789156.5133457-CDS-D-mesarthrocarpus_Contig1011:17355..17549Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1011 17356..17549 -
1680789156.5249403-CDS-D-mesarthrocarpus_Contig1011:17729..178881680789156.5249403-CDS-D-mesarthrocarpus_Contig1011:17729..17888Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1011 17730..17888 -
1680789156.53719-CDS-D-mesarthrocarpus_Contig1011:18688..187831680789156.53719-CDS-D-mesarthrocarpus_Contig1011:18688..18783Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1011 18689..18783 -
1680789156.5476313-CDS-D-mesarthrocarpus_Contig1011:18992..191761680789156.5476313-CDS-D-mesarthrocarpus_Contig1011:18992..19176Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1011 18993..19176 -
1680789156.5562675-CDS-D-mesarthrocarpus_Contig1011:19584..196611680789156.5562675-CDS-D-mesarthrocarpus_Contig1011:19584..19661Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1011 19585..19661 -
1680789156.5673056-CDS-D-mesarthrocarpus_Contig1011:20330..204141680789156.5673056-CDS-D-mesarthrocarpus_Contig1011:20330..20414Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1011 20331..20414 -
1680789156.5778067-CDS-D-mesarthrocarpus_Contig1011:21014..211521680789156.5778067-CDS-D-mesarthrocarpus_Contig1011:21014..21152Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1011 21015..21152 -
1680789156.5881975-CDS-D-mesarthrocarpus_Contig1011:21844..219611680789156.5881975-CDS-D-mesarthrocarpus_Contig1011:21844..21961Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1011 21845..21961 -
1680789156.6018384-CDS-D-mesarthrocarpus_Contig1011:22414..225451680789156.6018384-CDS-D-mesarthrocarpus_Contig1011:22414..22545Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1011 22415..22545 -
1680789156.6130352-CDS-D-mesarthrocarpus_Contig1011:22671..227531680789156.6130352-CDS-D-mesarthrocarpus_Contig1011:22671..22753Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1011 22672..22753 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1011.7.1

>prot_D-mesarthrocarpus_Contig1011.7.1 ID=prot_D-mesarthrocarpus_Contig1011.7.1|Name=mRNA_D-mesarthrocarpus_Contig1011.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=447bp
AFCPPLSRFEGKALLFWPQRSWDRRKAVFSTETGPFNAGRREAVGGWGAV
NSRHALPLSMVSGVSKSARFSVAGIKSLAGISWKVKRGNLWDSVVPIVNP
EKLVLYIVFQIVYARALRLLYQVQIQVWRLVRKHDPPPYSESVLGFLEPR
LHMLSRVLALVYLLNGAVGIMIASGWNIQPSLAKVMSDVIYCWYMGYFID
KAKQFTLPVWIPSLRADKRKGFIYNRSLSVFTWSVCALYVVEIISVFLRI
PITSTLAFGGIGGLAFGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRN
GVRCEGRVERVGWYQTRLRGRDTRPTYVPNSVFVDSMVTNMDRITHRKFE
TNFELRYDDLPKVTAIVQGIRAALKEVPNIDLLSPFRVHLVDFSPSGLKF
TVVCYFATKSFDEFLYLQQVTLLEVARVADEAGATMMSVYHLDMSNP
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mRNA from alignment at D-mesarthrocarpus_Contig1011:16811..22753-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1011.7.1 ID=mRNA_D-mesarthrocarpus_Contig1011.7.1|Name=mRNA_D-mesarthrocarpus_Contig1011.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=5943bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1011:16811..22753- (Discosporangium mesarthrocarpum MT17_79)
GCGTTTTGTCCTCCTCTGAGCCGGTTCGAGGGCAAAGCACTGCTGTTTTG GCCACAGCGTAGTTGGGATCGGCGAAAAGCAGGTAAGGGGGTCAAAGCCT CTGGTTAGGGTTTCAGGCTGTGCCACACTTCCAGCAGATTGTTCGGTGGA CCCTCCTTCCAGAGGATCGATGACTTGAAGCAACTCCTCGATTCTTCAAC GTTGACAGTTTTTAGCACGGAAACAGGCCCATTCAATGCGGGGAGGAGAG AAGCCGTCGGAGGGTGGGGGGCTGTAAATTCACGCCATGCATTGCCACTC TCGATGGTTTCTGGTGTCTCCAAATCAGCCAGGTTTTCGGTGAGTATCTT CGGTAACCGTCTCTCCACTAGAAGAGAATCTCGGGCAGGAAGTTGTACCA CTCCACCAGGTTAGACATTATATATTGCAGAGAATCCACACGGGAAAATG TTATTCATCCCGAACCACATATACTATTATGCTGCGGCCAACCGTTCTGT GTGATAGCAATTGGGTGCGTGGAAAAAATCACGGTTTCCACACAAAAATA TACATCCCACAATCATGAACTTGGCAAAAACGTCGAAAAAGTGTCGGTCC AGGTCAGACTTTATGATCATACTTCATCAGCAATGAAATTGACCTATTTC AAGGGAATTCGTGCAAGATAGAAGCAAAAGACGTTCGGGATTCTAATATG TACCACCCTTACCCAGGCACTTGTACCTGTTGTTGCAATCCTGGTTGATA GTCACGGGGGTTCGTTACAATTCTTCACACTTCTTTTGCCAGGTTGCAGG CATCAAGAGCCTGGCAGGCATCAGCTGGAAAGTAAAGCGCGGTAATCTGT GGGACTCGGTCGTGCCGATCGTGAACCCTGAGAAGCTCGTTCTGTACATC GTTTTCCAAGTGGGTGTTCAACTGTACTGTGAGGTTCACTGCATCTCCAA TAATAGTTGGGTGTGTGTTATTCTTGACTGTTAAGAGGTTGTGGAGGATC CCACGTTGTGCTGAAACAGTAATTGTTTGATGTCAACTCTTGTGTGGGGT TTTGTTGTGTTGTATATGGGACTTATTTGCGCTTGTTGGTACACAGTATA TTCGAGTATTATTGAGCGGCTTCTGTCTCCTGGTATTGGTGTCTATTGTA ACACCTTACGTGCTTTTAGGGCAACTAATATAGAACGAAAGATGTGAAAT AAACTGTTGTCCCCCTTTCGTGAGGTGGGTGGATGGTACTCGGTCACTTG CACATGTATGATGGATGCAGTGGTGTGATGGCATGACCTGTGTAAAATTT AAGTTACTCGAGGAATACTCTGGCTATGGGGGCTTTTTTCTCACTCTGTA GCGCTCTGTGATGTATGATGTACAGATGCTACGGCAGTGGATTTGGCTTG TCGACCTATAAGGTGGGACAAACTGGCTTTACACATGCCCACCTTAAAGT GGACCACCCATTGCAAGCAAGAGATAAGATTAGTTGCAGCAAGTGCGAGA AGGGTGCATCACCACATGTCTCATTATCCCACGCCTCATTATCCCATGTC TCATGATGATGAACTCCCCACCGCTTACCTCCTTTCCAATCTCTGCTGCA GATTGTGTATGCCAGGGCGCTTCGTTTGCTCTACCAGGTACAGATACAGG TGTGGCGACTTGTTAGGAAGCACGATCCACCACCTTACAGTGAATCTGTG CTGGGGTTTCTGGAGCCACGGCTGCATATGCTGAGCAGGGTGAGACCAAT TCAAGCCTAGGACAAACAAGAGGTAGCCTTGCACCCCTTCTGGCGCTGTT TTGGCTATGACTTATTCCTCTTTTGTACCATTGTCATTCTTTGGTGAGCC ATCGTTTGTGGTCGTCTTCTGTCGTTGAGTTGTGTCCCTGACAGTCAACG CAGGCGGTACACTGGATGTATTAGGAATCTCAAGCCCTGCAGCTCGATGG TATGCACAAACTAAATATCGCTCCTATGATCCTCACACCCTGAACACAAC TGCGTTATTCTGTCTGTACTGTTGTGAAGGGCCAAAAGCCTGTGTCACTT TGTTTTTGTCACTCTTCAAGCAAATTCTTTGTTTTTGTCACTTTTGAAGC TAATTTTTTTTTTACTTTTGAAGCTAATTCTTTTGTCTATCACTTTTCAA GATTTTTTTTTTTGCTTCCATGTGCGTAAGCGTGCGTCTGAGCCCTGGAA CCAATGCACATTTTGTGAGTGTTTTTTTTTGTGAGGTTTTCTGCGATTCC ATGCTTTCAGGACTCTAATACTGGTGCTGACAGATACCACAGAAGGGGTA TTCCACCATGCATTACAACTTACTGTGATTCCTGTGCAGGTGCTGGCCTT AGTGTACCTCCTCAATGGAGCGGTGGGAATCATGATTGCCAGTGGCTGGA ACATACAGCCCTCACTTGCAAAGGTGAAGAGGTGACTCAACCATCAACCA GCAACCAGGGATAAACATGCCTTATCCATTGCAAGTGCATCCTGTGACGC ACCTGTACTGGTACTGTAGTACAACGAGTACAAAGAATTTATCAGCCAAA GCACCCCGTACAAAGGTGCGGTGAAAAATGGGAATGATCTGAATGCTGTT GATCCACTTCTGGGCAAGGTCCAGCATAGCTCAAGTTCTGGCATTTTTGT TTTTCATGGCTCGTGGTTGATTGGTGGTTTGATTGGACACAGACAGCTGC CCAATCAAGGATGATTTGGTTATCGTATAATGAATAGCTGCCCAATCAGG GATGATTTGGTTATCGTATAACAAATAGCTGTTCAATCAGGGATGATTTG GTTATCGTATAACAAATAGCTGTCCAATCAGGGATGATTTGGTTATCGTA TAACAAATAGCTGTCCAATCAGGGATGATTTGGTTATCGTATAACAAATA AGCTGTCCAATCAGGGATGATTTGGTTATCGTATAACAAATAAGCTGTCC AATCAGGGATGATTTGGTTATCGTGTGACAAGTAGCTGCCCAGAACTCTC ACCTTTTGTTTTACCTCTTCACCTTTGATGCACCTGACTTTTTGTGTTCT TGGTCTTGGCACTTCCTTTGCATACCCCTCCCCGTACTCCAGGTGATGTC AGATGTGATTTACTGTTGGTATATGGGTTATTTCATTGACAAGGCCAAGC AGTTTACACTTCCAGTGTGGTGAGCAATGAAAGACTTTTATTGTGGTTGA TATTCTATTTGCTCTGCCAGCATCATAGATGCTGCACTACGCTTGTACCA GTTCACCATAATTTCTTGACTACCCTTTTCCAATTAAGAGAAGGCAGGTG TAAACAGTTCAGCTTACTTTACAGCAGAGCAGCATCACTCAGATGAGATC AATAGGTTTGATGCAAAAGTGTTTTGACGTGTGAATACCTTGCGATGGCT GACCGTGTCAATCTGTTTCATTCAATTCCAATGATAATGTTGAGCGACAG CCACTTTTAGCCTACGGCAAGCACCTCTGTCTATGTACATGCTTGCAGTC CTCCTCAACCTTTTCTTCCTTTTTCTCTCCCTGCCCTCAATAGACCACTG TGCTTCCCACGCCGTGCCTGTGAACAGGATTCCGTCACTGAGGGCAGACA AGCGTAAGGGCTTCATCTACAATCGTTCACTCTCAGTGTTTACATGGTCC GTGTGTGCTCTGTATGTTGTGGAGATCATAAGTGTCTTCCTGCGCATACC TATCACCTCCACACTGGCATTCGGGGGTATCGGAGGGTTGGCTTTTGGTC TTGCCGGCAAGGTATGTTGTCTGGAGAGCCACCCAGGGGGTACGTTGGCT TCTGATTTTTTTTTTTTTTTCTGTGTTTTTTCTCCACGCCTGTGCCGTTT GAGGACTGTTGCTGCCACCTGCATCAGTTTTTTTTTGTCGATGGCCCGGA CATACTGGCAAACACAACATTTGTTGTCTCACCAGTCTTGGGGCTCCCAA AATCACTTCTGATGACATAGGATGTGCTGTCCAATTTCTTTGGGGGTCTT ATGCTGCTACTTGCAGAGCCATTCATCCCAGGAGACATGGTCACATTCCA GAGGAATGGGGTAAGGTGAGTATGATTGACTTTTACCTTGAAGTAAGTTA CTTCACATGAAGTATGTAGATGGTTTTGCTGATGTTACCAGAGGAGCTGG TTTGTTTGCTATCATCTTCCACTATAGAGCTCTACATCTAGCGTACATGA TATTAGAATTCAGATTTGAACAATAGACCAAGTTGTCGTATCCACATGGG TATTTTGAAGTCCACTTTTGACCTCAAGCTGTCCATAGGACAAGGAAACA GGCTGTAGAGGAAGATTTGTTCTTCCAGTGGGTTCTTGTTACATATGGTC GTCACAATCTCATCGCCTGTTCTCGAATCGGATACTTGCATCACGGAGTA TTTTCAGCATTGAGCTTTCCCATCTCCCACTTGGACAATGGCCGATGAGA AGATGCATGTGAGAGGGTTATTAGTCATCTGGTCAATATAAGGATGACTG ACTGGTGAATGGTCGGGGGAACACCAGTGTTTGAAGGAAAATATGTCTTC ATCCCTCTTTTATGCGAGATACAGGTAGCATATAAAGCTAAGCATTGAAG ACATGAGCTATATGTTTCAGGCAGAAAGTGTGCTGTGGGAAAGGGAGATT GAGGGTATGACCTAATGAATTCATTTGGTGACACTGAGCCTGTTCCTGTG TATTGAAAGGGGACTAAAGATGAAAAAGATAGCTTCAGGAGAACATGAAA CAAAGTAGCCTCGGAAGAGTTAACTGCACTACCTCAGAGAGAGACGGGCG CTGGGCGTAAAGTTCCTCCTACAGATAAGTATAAGTGTCCCACAAACCCC AACTGTGTTGCCCAGGTGCGAGGGGCGAGTGGAACGGGTTGGTTGGTACC AGACCCGTCTGAGGGGCAGGGATACTCGACCGACGTATGTGCCTAACAGC GTGTTCGTGGACAGTATGGTGACAAACATGGACCGCATCACTCATCGCAA GTTTGAGACGAACTTTGAGCTGCGGTAAGAGCTTTAAGGGGTGGGATGAA GGGTGATGATGATGACGTGATGGTGGCGGCAATGATGCTGCTGATGGGTG ATCTTGATGAACAGCTGTTCAAAAACCTGCGGTATAGTCTTGAGGGAGGG ACATAAGAAACCATGCGCTATTTTTGCTAACTCAACATCCACCATGCGTG ACAGATATGATGACCTACCTAAAGTCACAGCCATAGTTCAAGGCATTAGG GCTGCCTTGAAGGAGGTGCCAAATATCGACTTGCTGAGTCCCTTCCGTGT GCACCTGGTGGACTTCTCACCATCCGGTCTCAAGTTCACAGTTGTCTGCT ACTTTGCCACCAAGAGCTTTGACGAGTTCTTGTATTTGCAGCAAGTAAGT ACCCTCATGCCCAAGCTTTTTGCATCCTGCACCATAGTATGGCTAGAAGC GGCCCTGAAGTTAAAACTATTAGTTGAAGAGCATGCCTGTAGTGGAGTTT TGGGTTAGGTTTTAACGTTGTAGAGTTCTATCCATCGTAATGGTTGTTCC TTTGTCCCCATTTACCCAGCGATCACTCCAACCTTTTTTTCTGTCTTCCC TTTAAGGTTTGTATGTTTTTGTTGATACACATGGCCGATATCAATCATTA CTGATATAATAGTTTCATGAATGAAAAGAGAGAAGGGGGGCAGTACCAGT ATATACATTTACTTTCTTTTTTTCTGTATACCAAGGACTTGAGAGATACC AGTATATGTCTGGGGTAAGATTGCTTGCGCTGTTCTGGGTTGGTTTCAAA ACAGTATGCCAATTGGTGACAGCCCTCATGTTATGTGTCACTCTGATGCC TGGCTGCAGAGAGCCCTCTTGGAGGTGGCTCGTGTTGCAGATGAGGCTGG AGCTACAATGATGAGTGTCTATCACTTGGACATGTCCAATCCC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1011:16811..22753-

>mRNA_D-mesarthrocarpus_Contig1011.7.1 ID=mRNA_D-mesarthrocarpus_Contig1011.7.1|Name=mRNA_D-mesarthrocarpus_Contig1011.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1341bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1011:16811..22753- (Discosporangium mesarthrocarpum MT17_79)
GCGTTTTGTCCTCCTCTGAGCCGGTTCGAGGGCAAAGCACTGCTGTTTTG
GCCACAGCGTAGTTGGGATCGGCGAAAAGCAGTTTTTAGCACGGAAACAG
GCCCATTCAATGCGGGGAGGAGAGAAGCCGTCGGAGGGTGGGGGGCTGTA
AATTCACGCCATGCATTGCCACTCTCGATGGTTTCTGGTGTCTCCAAATC
AGCCAGGTTTTCGGTTGCAGGCATCAAGAGCCTGGCAGGCATCAGCTGGA
AAGTAAAGCGCGGTAATCTGTGGGACTCGGTCGTGCCGATCGTGAACCCT
GAGAAGCTCGTTCTGTACATCGTTTTCCAAATTGTGTATGCCAGGGCGCT
TCGTTTGCTCTACCAGGTACAGATACAGGTGTGGCGACTTGTTAGGAAGC
ACGATCCACCACCTTACAGTGAATCTGTGCTGGGGTTTCTGGAGCCACGG
CTGCATATGCTGAGCAGGGTGCTGGCCTTAGTGTACCTCCTCAATGGAGC
GGTGGGAATCATGATTGCCAGTGGCTGGAACATACAGCCCTCACTTGCAA
AGGTGATGTCAGATGTGATTTACTGTTGGTATATGGGTTATTTCATTGAC
AAGGCCAAGCAGTTTACACTTCCAGTGTGGATTCCGTCACTGAGGGCAGA
CAAGCGTAAGGGCTTCATCTACAATCGTTCACTCTCAGTGTTTACATGGT
CCGTGTGTGCTCTGTATGTTGTGGAGATCATAAGTGTCTTCCTGCGCATA
CCTATCACCTCCACACTGGCATTCGGGGGTATCGGAGGGTTGGCTTTTGG
TCTTGCCGGCAAGGATGTGCTGTCCAATTTCTTTGGGGGTCTTATGCTGC
TACTTGCAGAGCCATTCATCCCAGGAGACATGGTCACATTCCAGAGGAAT
GGGGTAAGGTGCGAGGGGCGAGTGGAACGGGTTGGTTGGTACCAGACCCG
TCTGAGGGGCAGGGATACTCGACCGACGTATGTGCCTAACAGCGTGTTCG
TGGACAGTATGGTGACAAACATGGACCGCATCACTCATCGCAAGTTTGAG
ACGAACTTTGAGCTGCGATATGATGACCTACCTAAAGTCACAGCCATAGT
TCAAGGCATTAGGGCTGCCTTGAAGGAGGTGCCAAATATCGACTTGCTGA
GTCCCTTCCGTGTGCACCTGGTGGACTTCTCACCATCCGGTCTCAAGTTC
ACAGTTGTCTGCTACTTTGCCACCAAGAGCTTTGACGAGTTCTTGTATTT
GCAGCAAGTAACCCTCTTGGAGGTGGCTCGTGTTGCAGATGAGGCTGGAG
CTACAATGATGAGTGTCTATCACTTGGACATGTCCAATCCC
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