prot_D-mesarthrocarpus_Contig10103.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10103.1.1
Unique Nameprot_D-mesarthrocarpus_Contig10103.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length103
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10103.1.1 vs. uniprot
Match: UPI001CA98769 (Hsp70 family protein n=1 Tax=Dactylosporangium vinaceum TaxID=53362 RepID=UPI001CA98769)

HSP 1 Score: 50.1 bits (118), Expect = 8.050e-5
Identity = 20/37 (54.05%), Postives = 26/37 (70.27%), Query Frame = 0 
Query:    2 SPDSRLASSCGDDKTVRLWDVDTQSALHTFFDHDSPV 38
            SPD RL ++ GDD+ VR+WD+D+    HT  DHD PV
Sbjct:  349 SPDGRLVAAGGDDRKVRIWDIDSALVRHTLSDHDGPV 385
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10103.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001CA987698.050e-554.05Hsp70 family protein n=1 Tax=Dactylosporangium vin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 50..64
score: 41.9
coord: 8..22
score: 34.32
coord: 92..103
score: 25.47
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 66..103
e-value: 0.045
score: 22.9
coord: 24..63
e-value: 1.3E-10
score: 51.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 1..21
e-value: 2.4E-4
score: 21.8
coord: 68..103
e-value: 2.0E-7
score: 31.6
coord: 28..63
e-value: 1.3E-8
score: 35.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 31..72
score: 14.886235
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..30
score: 12.74747
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 73..103
score: 12.914561
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..103
e-value: 5.5E-36
score: 126.1
NoneNo IPR availablePANTHERPTHR44019:SF1POC1 CENTRIOLAR PROTEIN HOMOLOG Bcoord: 1..103
NoneNo IPR availablePANTHERPTHR44019WD REPEAT-CONTAINING PROTEIN 55coord: 1..103
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 31..66
score: 11.681953
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 73..103
score: 12.051043
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 1..24
score: 9.493783
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 8..22
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 50..64
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10103contigD-mesarthrocarpus_Contig10103:355..1983 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10103.1.1mRNA_D-mesarthrocarpus_Contig10103.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10103 355..1983 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10103.1.1 ID=prot_D-mesarthrocarpus_Contig10103.1.1|Name=mRNA_D-mesarthrocarpus_Contig10103.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=103bp
YSPDSRLASSCGDDKTVRLWDVDTQSALHTFFDHDSPVGEVRFHPDGTCV
ASCSADKTIKVWDTRSHKLLQHYPAHDGEVTSISFHPSGNFLLSSSADTS
LKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf