Homology
BLAST of mRNA_D-mesarthrocarpus_Contig101.11.2 vs. uniprot
Match:
A0A6H5JN10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN10_9PHAE)
HSP 1 Score: 103 bits (256), Expect = 6.790e-20
Identity = 73/170 (42.94%), Postives = 109/170 (64.12%), Query Frame = 2
Query: 662 GAGDGSEESGIGLEGRVKVIEKLQMSDLEGLEDEDRELRKKAQELETEIMAVKQRRLEVQLVKIEQDLRVEADTRLKKHHARVKKEADVACQALRSERDKHVKQVVSFKDGLHRKLEQLCAMYEEVSTRLQILEKAYSDAEEKVHRQAWEDLQVARHQEECAISQQMQSL 1171
GA G E+G G+ G V + E +E+E+R L++KA +LE E+ AV+ RRLEV LVK+EQ L+ EA RL + AR+ E + +C+AL +ERD+ V V + KD L KLEQL MYEEVSTR+ LEKAY+ AE ++ +A D + A +E+ + ++++++
Sbjct: 88 GAEGGGTEAGAGV-GVVGMGE---------IEEEERRLQEKASKLELEMSAVQSRRLEVYLVKVEQQLQEEAAMRLVQREARINLEVERSCKALAAERDERVSGVAAVKDNLRGKLEQLSIMYEEVSTRMDNLEKAYAQAESELKDRALADQRKAVEREDRGVRRRVRAI 247
BLAST of mRNA_D-mesarthrocarpus_Contig101.11.2 vs. uniprot
Match:
D7G239_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G239_ECTSI)
HSP 1 Score: 99.4 bits (246), Expect = 2.760e-18
Identity = 62/136 (45.59%), Postives = 93/136 (68.38%), Query Frame = 2
Query: 764 DRELRKKAQELETEIMAVKQRRLEVQLVKIEQDLRVEADTRLKKHHARVKKEADVACQALRSERDKHVKQVVSFKDGLHRKLEQLCAMYEEVSTRLQILEKAYSDAEEKVHRQAWEDLQVARHQEECAISQQMQSL 1171
+R L++KA +LE E+ AV+ RRLEV LVK+EQ L+ EA RL + AR+ E + +C+AL +ERD+ V V + KD L KLEQL MYEEVSTR+ LEKAY+ AE ++ +A D + A +E+ + ++++++
Sbjct: 255 ERRLQEKASKLELEMSAVQSRRLEVYLVKVEQQLQEEAAMRLVQREARINLEVERSCKALAAERDERVSGVAAVKDNLRGKLEQLSTMYEEVSTRMNNLEKAYAQAENELKDRALADQRKAAEREDRGVRRRVRAI 390
BLAST of mRNA_D-mesarthrocarpus_Contig101.11.2 vs. uniprot
Match:
A0A7S2XWH3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWH3_9STRA)
HSP 1 Score: 56.2 bits (134), Expect = 3.530e-6
Identity = 34/97 (35.05%), Postives = 58/97 (59.79%), Query Frame = 2
Query: 794 LETEIMAVKQRRLEVQLVKIEQDLRVEADTRLKKHHARVKKEADVACQALRSERDKHVKQVVSFKDGLHRKLEQLCAMYEEVSTRLQILEKAYSDAE 1084
++ E+ VK RR +VQL ++E+DL+ E+ RL+ +++E + L E + + V +KD L K+EQLC +YEE+S R +++A+ AE
Sbjct: 1 MQAEVERVKTRRAQVQLQRLEEDLKAESAARLRAAQEELQQEVATKVKRLHLEFEGRCQAVKQYKDDLKAKIEQLCTIYEELSQRQVSMQEAFKKAE 97
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig101.11.2 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 3
0 1 Expect = 6.79e-20 / Id = 42.94 Expect = 2.76e-18 / Id = 45.59 Expect = 3.53e-6 / Id = 35.05 Sequence A0A6H5JN10_9PHAE D7G239_ECTSI A0A7S2XWH3_9STRA back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Model size 1974 Hectar predicted targeting category other localisation Exons 5 Ec32 ortholog description hypothetical protein Ec32 ortholog Ec-11_002240.1 Cds size 978
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789155.360758-UTR-D-mesarthrocarpus_Contig101:44755..45113 1680789155.360758-UTR-D-mesarthrocarpus_Contig101:44755..45113 Discosporangium mesarthrocarpum MT17_79 UTR D-mesarthrocarpus_Contig101 44756..45113 + 1680789155.4332914-UTR-D-mesarthrocarpus_Contig101:51345..51983 1680789155.4332914-UTR-D-mesarthrocarpus_Contig101:51345..51983 Discosporangium mesarthrocarpum MT17_79 UTR D-mesarthrocarpus_Contig101 51346..51983 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789155.374485-CDS-D-mesarthrocarpus_Contig101:45113..45554 1680789155.374485-CDS-D-mesarthrocarpus_Contig101:45113..45554 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig101 45114..45554 + 1680789155.3856509-CDS-D-mesarthrocarpus_Contig101:46176..46246 1680789155.3856509-CDS-D-mesarthrocarpus_Contig101:46176..46246 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig101 46177..46246 + 1680789155.3979175-CDS-D-mesarthrocarpus_Contig101:49090..49209 1680789155.3979175-CDS-D-mesarthrocarpus_Contig101:49090..49209 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig101 49091..49209 + 1680789155.4107656-CDS-D-mesarthrocarpus_Contig101:50105..50207 1680789155.4107656-CDS-D-mesarthrocarpus_Contig101:50105..50207 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig101 50106..50207 + 1680789155.4239783-CDS-D-mesarthrocarpus_Contig101:51099..51345 1680789155.4239783-CDS-D-mesarthrocarpus_Contig101:51099..51345 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig101 51100..51345 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig101.11.2
>prot_D-mesarthrocarpus_Contig101.11.2 ID=prot_D-mesarthrocarpus_Contig101.11.2|Name=mRNA_D-mesarthrocarpus_Contig101.11.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=326bp
MRSTTSEANGMVSKTTKLPSSGATRAMGQPSGHRRPRPGSSKGEEIKEVP back to top mRNA from alignment at D-mesarthrocarpus_Contig101:44756..51983+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig101.11.2 ID=mRNA_D-mesarthrocarpus_Contig101.11.2|Name=mRNA_D-mesarthrocarpus_Contig101.11.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=7228bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig101:44756..51983+ (Discosporangium mesarthrocarpum MT17_79)ACAAGCAACTGGGCAGGGTAACAAGGGAGACCATCCCTCGACAGGCGGGG
AAGAAGACGATAACCTGTCGGCATGGAGTTCGGGTGAGGTTTCTTTGAAG
GAAAGTCGGCGTCCGGAGCAAACAACGAGGCAGGGAGGTTGCCATGCGGC
TACAAGGGTTTCGAAAGGAGGGAAAACGAGGGAGCAGTCGGTGGATGCTC
GAAGTTGCAGGCCTCGTCAAACTGATACCGACACAAAATGTCTCTCCAAC
AATCATGTCAAGGCGGAGACCGGAACTGGTCGGGGAACCCGGAAATCGAG
TAGGTCGAAATCAGGGAGAGACCAAGACACCCGGCCGGCGTGGAACTTGT
CGACAAAA ATGAGAAGTACGACGTCTGAGGCGAACGGAATGGTGTCAAAG
ACTACAAAGTTGCCTTCTTCTGGGGCCACACGAGCTATGGGTCAACCGTC
AGGCCATCGTCGCCCTAGACCAGGCAGTAGCAAGGGCGAAGAAATCAAGG
AAGTACCCGTGGAGGTTGACCTTGCAGCCCCAAGTCAGGACGAGATACGC
CGCATGATCGAGAGAATACGCCGCCAGGCAAATATGAAATCTGCAAGAAG
GGGGGATCGAGTCCGCAGGGGCCATGAAAAGGTTGGGGGTATACCTACTG
AACAGAGAAAAGGGGCAGGAGATGGAAGCGAGGAAAGTGGGATAGGGTTA
GAGGGCAGGGTTAAGGTTATTGAAAAGCTCCAGATGAGCGACTTGGAAGG
ACTGGAGGACGAGGATAGGGAGCTGCGAAAGAAAGCCCAGGAACTAGAG G
TGAGCAACGCCAAAAGGGACTTGAGCCTCGCCGATTCATGCTTGCTGCAA
TGGTGCGTGTACTGTACCTTACTCGCAAACTTGAGCTTCAATCAAACTTC
GAGGAGACAGCAGGGTTGTCCTTCTGCTTGGAAGTACTTCAAAGAGAACG
AGAAGTCGCACGTTGAAGGACTGTCTTCAGTAAACTAGCTACAATTTCAG
TTGCTAGAGCATCGGCACTCCCCCTCCCACTCTTTGCGTTCGTCGCTAGG
AAGTACGACCATCCGAAGCACTTCAAGTAGCTTTATTCGGTAGCCCTGTA
CCCAGGAGGACATAACCACCCCTTGCCTCAGGAAAGCTAAGAATGTCGTC
AGTGGTTACCGGACCTTTGTTAATGGCTTTTATGGGACGGGAACAAATAC
GGATTCTGCTCTCCCTTCACCGGTTTGTGAGATCAGCGGGCATGCACCAA
ACTGTAGAGAGTCTCATCAAGCAGGCTGTCATCTCCCTCTTCTTGTGTTT
CCTTGCTAGAGTGCCATTGAGTACACTGATCTGCTTTCTTCTTTGTGTTC
CCTTGCTGGAACAGAGGTTCAGCAGAGCTACACCTTTGTGCTGACCTCTA
TACTGGTTGTTGTGACCTCAGACAGAAATCATGGCTGTGAAGCAGCGACG
GCTTGAGGTTCAGCTGGTCAAGATAGAGCAAGACTTGCGGG GTGAGCAGG
CTCATTTTTTTGTTCACCCTGTGGAGCCTTGGTTCAGTTACCACATTTTA
GTAAGTAATCTAACATAACTTAACCTAACCTAACCTAACCTAATCTAACC
TAATCTAACCATAAACATTTGCCTAACCTAATCTAACCTAACCTAATCTA
ATGTGATCTAATCCAATCTAACCTAACCTAACTTAACCTAATCAAACCTA
ATCAAATTAAATCAAATCTAATCTAATATACCCTAATCTAATCTAATCTA
ACCTAACCTAACCTAACGTAACCTAATCTAACCTGACCTAATCTAACCTA
ACCTAATCTAACCTAACCTAATCTAACCTAACCTAATCTAACCTAACCTA
ACCTAACCTAACCTAACCTAATCTAACCCCAAACATTTGCCTAACCTAAA
CTAACCTAACCTAATCTAATGTGATCTAATCCAATGTAACCTAACCTAGT
CAAACCTAATCAAACCTAATCAAATCAAATCAAATCAAAACTAATATACC
CTAATCTAATTTAATCTAACCTAACCTAACCTAACCTAACCTAACCTAAC
CCTAACCCTAACCCTAATCTAATATACCCTAATCTAACCTAATCTAACCT
AACCTAATCTAATCTAATCTAATCTAATCTAATCTAATCTAATCTAATCT
AATCTAATCTAATATTAATCTAATCTGATCTAATCTAATCTAACCTCATC
TAACCTATCCTAACCTAACCTAACCTAACCTTACCTAACCTAACCTACCT
AACCTAATATAACCTGATCTAACCTAATTTATGCTCAGATACCAAGACAT
GCTTGATAAGTCCTATCAACAATCACCAATCACCAATGAATGGGATCACA
AGAATACACAACACAAGGCATGATTGCACCATTGATTGGTCCAACAAGGA
GATATTCCCGCCGGTGCCCTACGTTAACCAGTGAAAAATAGTGAGAATAC
CCAAGGTCCTTGCTCATTCAGCTCTGGTACAATTGCTGTTTCAGAACAAT
TGCTTGGTTCATCCAATCGCCCAACTTCAAGAGGATTTTGTCTACTATAC
TGCATTTCTGTGCCATTAATGACATTTTTTTGCACTTGGAATTGCCTAGG
AATAGTGCTGCAGTGTTGTGAAATGGATCACTATTTTGTGTGAAGTATCA
CTGCTTTGTGTTCCTCCACACTAGTTTATGTAACTTCATTTTACGTGGTG
GAAGTATCACTCTTTTTGTACTTATCACTAATTTCTGTGTAACATATCAC
TCTTTTTGTGTACTTATCACTGCTTGTGTGTAAAATATCAGTATTTTAGT
ATACTTGTCACTAATTTGTGTGTAAGGTATCACTATTTTTGTATACTTGT
CACTAATTTGTGGGTAAAATATCACTATTTTTGTGTACTTGTCACTAATT
TGTGTGTAAAATATCACTATTTTTGTGTACTTATCACTGATTTGTGTGTA
AAGTACCACTATTTTGTGTACTTATCATTGCTTTTTGTGTAAAATATCAC
TATTTTTGTGTACGTGTCACTAATTTGTGTATAAAATATCACTATTTTGA
TGTACTTATCACTAATTTGCGTGTAAAATATCACTATTTTTGTGTACTTA
TCACTGATTTGTGTGTAAGATATCACTATTTTGATGTACGTATCACTAAT
TTGCCTGTAAAATATCACTATTTTTGTGTACTTATCACTGATTTGTGTGT
AAACTATCACTCTTTTGTGTACTTATCACTAATTTTTATGTAAAATATCA
CTAATTTTGTGTACGTGCCACTAATTTGTGTGTAAAATATCACTATTTTT
GTGTACTTGTCACTAATTTGTGTGTAAGGTATCACTCTTTTGTGTACTTA
TCACTGATTTGTGTGTAAAGTATCACTATTTTGTGTACTTATGACTGATT
TGGGTGTAATATATCACCATTTTGATGTACTTGTCACTAATTTGTGTGTA
AGGTATCACTATTTTGTGTACTTACCACTAATTTTTGTGTAAGGTATCAC
TTTTTTTGTGTACTTGTCACTAATTTGTGTGTAAAGTATCACTCTTTTTG
TGTACTTGTCACTAGTTTGTGTGTAAGGTATCACTATTTTTGTGTACTTA
TCACTAATTTGTGTGTCATATGTCACTCTGTTGTGTACTTATCACTAATT
TTTGTATAAAATATGACTATTTTTATATGCTTGTCACTAATTTGTGTGTA
AGGTATCACTACTTTTGTGAAATTATCACTGATTTGTGTGTTATGTATCA
CTCTTTTGTGTACTTACCACTAATTTTTGTGTAAAATATCACTATTTTTT
GTGTACTTGTCACTAATTTGTGTGTATCACTATTTTTGTGTACTTGTCAC
TGATTTGTGTGTAAGGTATCACTATTTTTGTGTACTTAACACTGATTTGT
GTGTGAAGTATCACTCTTTTGTGTACTTATCCCTAATTTTTGTGTAAAAT
ATCACTATTTTTTGTGTACTTATCACTAATTTTTGTATGAAATATGACTA
TGTTTATGTACTTGTCACTAAATTGTGTGTGAAGTATTACTTTTTTGTGT
ACTTATCACTGGTTTGTGTGTAAACTATCACTCTTTTTTGGTCCCAGGGA
TACAGGAGTAATGAGCGTGGACGCGAATTCACATCACCCTGAACATGATT
AATCCTTTTTTTGTGACGATTAATGCCTCTTTGTGTGCTTTTCTGTGATT
ATGCCCTTTCTTCTTCACCATCATGATCACTATCATCATCCCCATTATCA
TCCCCATGATCATCCCCATGATCAATACCATCATTATCGACACCATTATT
ATCAACGCCACCACCAACACCATTGTTGTAATCAGTTGAGGCAGACACAC
GCCTGAAGAAACACCATGCCAGGGTGAAGAAAGAGGCGGACGTCGCCTGC
CAAGCACTAAGGAGTGAGAGGGACAAACACGTTAAACAAGTGGTATCCTT
CAAG GTACTACTACCATGGCAATCGTTTGCAGAGAAACAGCTCATACCTA
ACGTGTTGAGGTACTAGAGCTAGTACAGTAGTATCTGATGCGTACCCCCG
GCGCAAAAATGGGTGGAGTGGAACCGATCGTTTTGCGGATGCACCCGTTG
TGGTGCCATTGCCAGTTCCAGTGTTACCAGTATCATTGTTATCGGTATTA
TCAAAGTACTGTCAGTAATATGAAGATCATAAGCATTGTCAATATCATCA
GTATGCACCCTTCCCGCGGCAGGATGACGGCAAAGACTGTGCTACACACT
TTGGTAAATCAGTGAAACTTAGGGTTAGGGTTTGTGTAACTGACCCGCAG
AAAATGGGTTGAGCTGGGAGGAACAACTTGTCAATACAGCAAAATACTTT
GAATGAAGTATGGTTGCATTAGGGTTAGGGTTAGGGTTAGGATTAGGGAC
GGAGTTTAATTTTTTCCTAGTAAGCAATGGTTGCCAAGGAAGTACAAGGG
CACTGGTCGGCTATTTATTTCTTGGGTTGACTCAACACGCGGCACCTGTA
TTTGAGAGATGTGTGTGTTTTGCCATAGCCAGGGAAGACATGCTGGTTGG
AGTTGATCTGGGTCTATCTGTACCTGCAGATAATGAGATGAATGGCCTCA
CGTGTTTGTCAGCGCACATGACAATCAACCAGAGCTCCAGTGAGTTCCCC
CCCCCCAAACTTCGCCAACACCCTATTTCATTCCCCTCCCATATCTTGAA
GTAGTTAGTGCACTGTACATGAACACGCAAGTCACTTTGCATATCTTTAG
ACGTGATTTTTTGCCTCCACGATCCCATGGAATCGTATAGCTGCAGTAAA
GCCTTAGTACTACTCCAATGCTAACCTTGATCGGCAACCCGTGTCCCAAG
GATGGTCTCCACAGAAAGCTAGAGCAATTGTGCGCTATGTATGAGGAGGT
CTCCACCCGTCTGCAGATTCTGGAAAAGGCCTACTCAGACGCCGAGGAAA
AG GTAGCTCTTTCTGGTTGCCCTCCCGTTTGTTTGCTTGTAGGTCGAAGG
TCTTTACGTTGTGTCCATACCCTAACCCTAAATCTTGTTGGCGGACAAAC
TCCATCCTCCGAGATACTTTTAAGCAACAGCTGAATTTGGGGGTTTGTTT
ACCCCACGGTGTATTTCGCCCACTTCATGTTTTTGTACTTAAATTCAACA
CTGATGTGCTAATTTCCTTCATTTTGAAACCGAGGTCAAGATCTTACCGA
AGATAATGGTCAAGATTGGTCGAAATTCCTTCTCAGTCGTGGCGTCACCC
TCAACCCAAGTCCCAGAGCTTGTGAGCTCTAGTCCATCGAAATGAGTGCT
GGCTTCTGTCTGGTTGAAAGTCTCACAACCCCTATCCTCCAATTCCACCC
TTTTGCAGTTGGCCGTGTCCAGATGGGGCTCTCAAACTCTCAGTGTTACT
TTTACTGTGTAAACGCAATCCTTCAACCAACATATTGCTCTCAAATCCTC
TGTTGGAGTACCACACTCTGGATGGAAGTAGAGCCTCACGTCCTTATTAA
AAAGAAAGACTTTCGAAAATTTTAAGTATCAGTCACACGTGCAGGAATTG
CAAGGCTAAGTTAATTGCAGGTAGGTGCACATGAATGTTAATTACCCGTG
GGGATTCATGCAGGCAGAACGCAAAGCCCTAGACCTATCCAGAGCCGAAA
CGACGTGCCCTAGCCCTAGCCCTAGCCCTCTCACCCCATTTTCAACCGGC
AGCTGTTCATCCTTGAGACTACGATAACTCACCCCCTGGACCCTCACTCT
AGCCCTACCAATAACCCTAACCCTAAACTTTACCACCGACACTCAACACC
CTTGCCCCTGTCTCGCCTTTGTGGATGTTCTACCTTCTCTAAAGGTTCAC
CGCCAAGCATGGGAGGACCTGCAGGTTGCCCGGCATCAGGAGGAGTGTGC
CATTTCCCAGCAGATGCAGTCCTTAGCATCCAGAGGGGCTTCCAAAGTTG
TCTGGGCTACCAAAGAGGAAGATTGCCAAGGAGGTGGCGGTAGTTTCGTG
AAACGTGGAATCACGGGGTCACCGTTACAGGAAAAAGAAAGCCTCGCATT
TGGAGGGAGAGGATTTCGGGGGGTGGTAGAGGGGAGCTGA TATCCGTGCT
GTTTTGTGAAGATTTTGACGATAGATATTCAGCATGTAATGTTGAGAGAG
TTACGATATTTCTTTGCTTTTAAGGGGAGTCAAGCCCAGTCTTGTTTATG
ATATTGTGTACGTACGGAGGAGCACAACTGTCCTTGATTCTGGATGCAAG
GATTGTTTGGGATATCTGTGAAGTTCGATTAGAGTATTTTTGTCAGACAC
GTCATATCTTTTAGACGGTACGGGGTTGTTTACGAGGGCGCTGTATCGAG
CATTTCGGCCAGCAAATACGCCGATCTTGCTGGTTGCGTGCTCTCTCATT
TGTGCCTGTACGTACTTTGTTGTGGTTAGGCTCTGGAGGACCGTGCTGTT
ACGCTGAAATAGAGTGGTGTCACACCAAAGTCCTTAACGACCCTTCGCCT
TCGACAAGACCTATTTCGCACCGACACTTCGTCGTCCGCATGGATGAGGT
TAGACACTCTTTAGGGCAGGTGTCTTTACAGTTTCTTTTCGTAAGTTTTT
TGACATACTCCCGAACACTTGGTACTTGGTACTTGTTTGTCACATAAGAA
CGAAAACTAGAAAATGAAGTCACTGTTGTGGAAACCTCCCTTATCATGGG
GTGCACACGGACATCCTATATATCGCGC back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig101:44756..51983+
>mRNA_D-mesarthrocarpus_Contig101.11.2 ID=mRNA_D-mesarthrocarpus_Contig101.11.2|Name=mRNA_D-mesarthrocarpus_Contig101.11.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=978bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig101:44756..51983+ (Discosporangium mesarthrocarpum MT17_79) back to top