mRNA_D-mesarthrocarpus_Contig101.7.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig101.7.1
Unique NamemRNA_D-mesarthrocarpus_Contig101.7.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig101.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig101contigD-mesarthrocarpus_Contig101:28449..29660 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size345
Hectar predicted targeting categoryother localisation
Exons2
Cds size345
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789154.7364233-CDS-D-mesarthrocarpus_Contig101:28448..285311680789154.7364233-CDS-D-mesarthrocarpus_Contig101:28448..28531Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig101 28449..28531 +
1680789154.7497559-CDS-D-mesarthrocarpus_Contig101:29398..296601680789154.7497559-CDS-D-mesarthrocarpus_Contig101:29398..29660Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig101 29399..29660 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig101.7.1prot_D-mesarthrocarpus_Contig101.7.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig101 28449..29660 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig101.7.1

>prot_D-mesarthrocarpus_Contig101.7.1 ID=prot_D-mesarthrocarpus_Contig101.7.1|Name=mRNA_D-mesarthrocarpus_Contig101.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=115bp
MDCGKGVRESCEPQESQEPQEPQGLPDIQGHGDDSSQGGDGVLPWLRKRW
EGSTRWRESVLSQLGQAQCRNASGASVAQSAVGEAAGDATEDAAVDARGD
RVGQGAAGGGLRDKE
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mRNA from alignment at D-mesarthrocarpus_Contig101:28449..29660+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig101.7.1 ID=mRNA_D-mesarthrocarpus_Contig101.7.1|Name=mRNA_D-mesarthrocarpus_Contig101.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1212bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig101:28449..29660+ (Discosporangium mesarthrocarpum MT17_79)
ATGGATTGTGGTAAGGGCGTGCGAGAGTCATGTGAGCCACAAGAGTCACA
AGAGCCACAAGAGCCACAAGGGCTCCCAGACATGTGAGTCGAGGTACCAC
TGGGGGGGGTACGGGATATAGGGGGGTTGGGATGGGCGGGGTTCTGAGAC
ATGTGTAAGTGAAAGATATTTTGTAAGGTACCTAGTAAGATACTTTGTAA
GATACTGTGTATGACAGGTGTAAGGGGTGTGAAGAGGCAGTGTTGGGGTT
GAGGTAAGTGCTGGACCTTGATCTATTGCGGTGGTTATGATTTTCTTTTC
CTTTTATGTGACAAGCAACAAGGGCAGTTCACTGCAAGGTGCAGGTTCTG
GATCCACGCTCTGTACACTGTACCAGGTGCATGGTATGGACATAAGAGCT
CTAGGGCTGGGTTTTGGGTCAGGGTTGGGCTTGTGTCCTCCTCTTCTCTC
TTCTCTTTAGAATGTCCCAAGGCACCTGCTTGCCTCCCTGCCTGCCGACA
AGGCCTCAGTAGATTCTGTTCACTTGATTGGGGTTAGGGTTAGGGTTATG
TCTACAGTTGTGTGTGATTTGAGTTTACATGGAGCATTTGATTTCGATCA
ACTTTGTTGATCTTATTTGATCTGATATGATCTGATATGATCTGATATGA
TCTGATATGATCTGGTTTGATCTTATTTGATCGCATCTGATGTTATTTGA
TTCAACATGCACACTGTTGAGGAACTTCCACCTACAGGCAACACTGGACA
TGAGCTGGATTATGGATCCCCCCCCTCACACGGTCCTCACTTGTGTCAGC
AGTCATCTGTGCTCACCTGTCACCTGTCACCTGTCAGCTCTTCTCATGTC
TTCCCTGCTGTTTTTTTTCTTCTGGTTCTATTGGGCTGCCTGCCGTAAAG
CCTAACCCTAGCCCTAACCTTGTGTTGCCTGGGGGCATACGCCTCTGCAG
CCAGGGGCATGGTGATGACTCCAGTCAGGGAGGTGATGGAGTGCTGCCAT
GGCTCAGGAAACGATGGGAGGGTTCCACAAGGTGGAGGGAGTCAGTTCTT
TCCCAACTAGGCCAAGCTCAGTGCAGAAATGCCTCTGGTGCCTCTGTTGC
TCAGAGTGCTGTTGGAGAAGCTGCTGGAGATGCTACTGAAGATGCTGCTG
TAGATGCTAGGGGTGACCGTGTGGGGCAGGGGGCGGCAGGGGGTGGCCTG
AGGGATAAGGAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig101:28449..29660+

>mRNA_D-mesarthrocarpus_Contig101.7.1 ID=mRNA_D-mesarthrocarpus_Contig101.7.1|Name=mRNA_D-mesarthrocarpus_Contig101.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=345bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig101:28449..29660+ (Discosporangium mesarthrocarpum MT17_79)
ATGGATTGTGGTAAGGGCGTGCGAGAGTCATGTGAGCCACAAGAGTCACA
AGAGCCACAAGAGCCACAAGGGCTCCCAGACATCCAGGGGCATGGTGATG
ACTCCAGTCAGGGAGGTGATGGAGTGCTGCCATGGCTCAGGAAACGATGG
GAGGGTTCCACAAGGTGGAGGGAGTCAGTTCTTTCCCAACTAGGCCAAGC
TCAGTGCAGAAATGCCTCTGGTGCCTCTGTTGCTCAGAGTGCTGTTGGAG
AAGCTGCTGGAGATGCTACTGAAGATGCTGCTGTAGATGCTAGGGGTGAC
CGTGTGGGGCAGGGGGCGGCAGGGGGTGGCCTGAGGGATAAGGAG
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