mRNA_D-mesarthrocarpus_Contig10097.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5J7U9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7U9_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 2.910e-15
Identity = 48/107 (44.86%), Postives = 63/107 (58.88%), Query Frame = 1

Query:   10 MLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
            ML  +L  C G +  K +   I + T+TRAV  L+RVF+DL       SL G  Y  IV+DDY+R+ RVY L+ KSDA  A +R+LAE     A   ++ VRSD GG
Sbjct:    1 MLVGELWECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGG 107

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BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5JYF9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF9_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 1.000e-14
Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1

Query:    4 GIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
            G  L  +L  C G +  K +   I + T+TRAV  L+RVF+DL       SL G  Y  IV+DDY+R+ RVY L+ KSDA  A +R+LAE     A   ++ VRSD GG
Sbjct:  133 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRADGAPSDVIVVRSDNGG 241

[Close]

BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5L158_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L158_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.250e-14
Identity = 48/109 (44.04%), Postives = 64/109 (58.72%), Query Frame = 1

Query:    4 GIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
            G  L  +L  C G +  K +   I + T+TRAV  L+RVF+DL       SL G  Y  IV+DDY+R+ RVY L+ KSDA  A +R+LAE     A   ++ VRSD+GG
Sbjct:  180 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRADGAPSDVMVVRSDDGG 288

[Close]

BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5KGN1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGN1_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.750e-14
Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1

Query:    4 GIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
            G  L  +L  C G +  K +   I + T+TRAV  L+RVF+DL       SL G  Y  IV+DDY+R+ RVY L+ KSDA  A +R+LAE     A   ++ VRSD GG
Sbjct:   30 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGG 138

[Close]

BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5L8P7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8P7_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.780e-14
Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1

Query:    4 GIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
            G  L  +L  C G +  K +   I + T+TRAV  L+RVF+DL       SL G  Y  IV+DDY+R+ RVY L+ KSDA  A +R+LAE     A   ++ VRSD GG
Sbjct:  352 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGG 460

[Close]

BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5L060_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L060_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.790e-14
Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1

Query:    4 GIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
            G  L  +L  C G +  K +   I + T+TRAV  L+RVF+DL       SL G  Y  IV+DDY+R+ RVY L+ KSDA  A +R+LAE     A   ++ VRSD GG
Sbjct:  339 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGG 447

[Close]

BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5JTI6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI6_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.800e-14
Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1

Query:    4 GIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
            G  L  +L  C G +  K +   I + T+TRAV  L+RVF+DL       SL G  Y  IV+DDY+R+ RVY L+ KSDA  A +R+LAE     A   ++ VRSD GG
Sbjct:  698 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGG 806

[Close]

BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.810e-14
Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1

Query:    4 GIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
            G  L  +L  C G +  K +   I + T+TRAV  L+RVF+DL       SL G  Y  IV+DDY+R+ RVY L+ KSDA  A +R+LAE     A   ++ VRSD GG
Sbjct:  533 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGG 641

[Close]

BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.810e-14
Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1

Query:    4 GIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
            G  L  +L  C G +  K +   I + T+TRAV  L+RVF+DL       SL G  Y  IV+DDY+R+ RVY L+ KSDA  A +R+LAE     A   ++ VRSD GG
Sbjct:  546 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGG 654

[Close]

BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.810e-14
Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1

Query:    4 GIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
            G  L  +L  C G +  K +   I + T+TRAV  L+RVF+DL       SL G  Y  IV+DDY+R+ RVY L+ KSDA  A +R+LAE     A   ++ VRSD GG
Sbjct:  689 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGG 797

The following BLAST results are available for this feature:

BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot

BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

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POSITION

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Match Name	E-value	Identity	Description
A0A6H5J7U9_9PHAE	2.910e-15	44.86	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JYF9_9PHAE	1.000e-14	44.04	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5L158_9PHAE	1.250e-14	44.04	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KGN1_9PHAE	1.750e-14	44.04	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5L8P7_9PHAE	1.780e-14	44.04	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5L060_9PHAE	1.790e-14	44.04	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JTI6_9PHAE	1.800e-14	44.04	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JZQ8_9PHAE	1.810e-14	44.04	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JN00_9PHAE	1.810e-14	44.04	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KF60_9PHAE	1.810e-14	44.04	Uncharacterized protein n=12 Tax=Ectocarpus sp. CC...	[more]

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Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at D-mesarthrocarpus_Contig10097:134..454-
coding sequence from alignment at D-mesarthrocarpus_Contig10097:134..454-

protein sequence of mRNA_D-mesarthrocarpus_Contig10097.1.1

>prot_D-mesarthrocarpus_Contig10097.1.1 ID=prot_D-mesarthrocarpus_Contig10097.1.1|Name=mRNA_D-mesarthrocarpus_Contig10097.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=107bp
MGIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLESTPSL
RGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLT
VRSDEGG

mRNA from alignment at D-mesarthrocarpus_Contig10097:134..454-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_D-mesarthrocarpus_Contig10097.1.1 ID=mRNA_D-mesarthrocarpus_Contig10097.1.1|Name=mRNA_D-mesarthrocarpus_Contig10097.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=321bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10097:134..454- (Discosporangium mesarthrocarpum MT17_79)
ATGGGTATCATGCTCACGACAGATCTTACAACCTGCCCGGGGTATGCTAT
GGGCAAGACCATTCGATCACGCATTCGATCTTCAACAACCACGCGAGCGG
TGAGTCCCTTGGAGCGTGTATTCATGGACTTGGAGTCAACTCCCTCTCTT
AGAGGGATGTTGTACGATGCCATAGTCCGCGACGACTATTCAAGGTTCAT
GAGGGTGTATCCCTTAAGGGTCAAGTCAGATGCCTACACTGCTCTTCAAC
GTTTTCTGGCGGAAATCAACACCCTTAAAGCAAATCACGTTCTCTTGACG
GTTCGGTCTGATGAAGGGGGG

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10097:134..454-

>mRNA_D-mesarthrocarpus_Contig10097.1.1 ID=mRNA_D-mesarthrocarpus_Contig10097.1.1|Name=mRNA_D-mesarthrocarpus_Contig10097.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=321bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10097:134..454- (Discosporangium mesarthrocarpum MT17_79)
ATGGGTATCATGCTCACGACAGATCTTACAACCTGCCCGGGGTATGCTAT
GGGCAAGACCATTCGATCACGCATTCGATCTTCAACAACCACGCGAGCGG
TGAGTCCCTTGGAGCGTGTATTCATGGACTTGGAGTCAACTCCCTCTCTT
AGAGGGATGTTGTACGATGCCATAGTCCGCGACGACTATTCAAGGTTCAT
GAGGGTGTATCCCTTAAGGGTCAAGTCAGATGCCTACACTGCTCTTCAAC
GTTTTCTGGCGGAAATCAACACCCTTAAAGCAAATCACGTTCTCTTGACG
GTTCGGTCTGATGAAGGGGGG