mRNA_D-mesarthrocarpus_Contig10096.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10096.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10096.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: A0A6A4XRJ4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4XRJ4_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 9.690e-16
Identity = 61/187 (32.62%), Postives = 87/187 (46.52%), Query Frame = 1
Query:    1 DMYDLVHVDEKWFYI--MNDGTGVLPTPCIE---VQNKYFFSKYMFLVSVAW-LWKFCNGMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD*RGHPRNQDENAILP---------GHP--IFVQQDGGNLHTGKRVMEAIQDVAEYNLAMETEPANPPGLNVNDTGFFQSM 510
            D+YD VHVDEKWF+I  +N    V     I    V++K F +K MF+ +VA   W      +FDGK G WP V+  + +R SK   +G  + +T        +E             N ++P         G P  +FVQQD  + H      EA+       ++M  +PAN P  NV D GFF ++
Sbjct:   91 DLYDQVHVDEKWFFITTVNKKFYVYDDEEIALRAVKSKNFITKVMFIAAVARPRWDAHRKTFFDGKLGIWPFVEYAVAQRTSKNRPKGTIETKTKTVDGAVYKE----------SILNKVIPAIKARFPIGGQPNGVFVQQDNASPHKCVTT-EALIAHGVTGISMANQPANSPDFNVLDLGFFNAI 266          
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: A0A6A4XMT7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4XMT7_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.140e-15
Identity = 61/187 (32.62%), Postives = 87/187 (46.52%), Query Frame = 1
Query:    1 DMYDLVHVDEKWFYI--MNDGTGVLPTPCIE---VQNKYFFSKYMFLVSVAW-LWKFCNGMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD*RGHPRNQDENAILP---------GHP--IFVQQDGGNLHTGKRVMEAIQDVAEYNLAMETEPANPPGLNVNDTGFFQSM 510
            D+YD VHVDEKWF+I  +N    V     I    V++K F +K MF+ +VA   W      +FDGK G WP V+  + +R SK   +G  + +T        +E             N ++P         G P  +FVQQD  + H      EA+       ++M  +PAN P  NV D GFF ++
Sbjct:  192 DLYDQVHVDEKWFFITTVNKKFYVYDDEEIALRAVKSKNFITKVMFIAAVARPRWDAHRKTFFDGKLGDWPFVEYAVAQRISKNCPKGTIETKTKTVDGAVYKE----------SILNNVIPAIKARFPIGGQPNGVFVQQDNASPHKCVTT-EALIAHGVTGISMANQPANSPDFNVLDLGFFNAI 367          
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: W4G370_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G370_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.480e-14
Identity = 58/183 (31.69%), Postives = 78/183 (42.62%), Query Frame = 1
Query:    1 DMYDLVHVDEKWFYIMNDGTGVLPTPCIEVQNKYFFSKYMFLVSVAW-LWKFCNGMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD*RGHPRNQDENAILPG----------HPIFVQQDGGNLHTGKRVMEAIQDVAEYNLAMET--EPANPPGLNVNDTGFFQSM 510
            DMYD VHVDEKWF+ MN            VQ K+   K MFL +VA   W   +G WFDGK GTW   +IV  +R S +   G P   T              R   +    + ++P             + +QQD    H     ++ +         ME   +P N P LNV D GFF+++
Sbjct:  135 DMYDTVHVDEKWFF-MN-----------RVQKKHHLLKVMFLTAVAHPRWDETSGKWFDGKLGTWHFTEIVPAQRRSGRRDAGTPVMTTVSVT----------RETYKAMLVDKVIPAIRAKWPGGETKAVKIQQDNARPHVPPSDVDVVAACKADGWDMEVVFQPPNSPDLNVLDLGFFRAI 295          
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: UPI000E70440D (uncharacterized protein LOC113337402 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E70440D)

HSP 1 Score: 77.8 bits (190), Expect = 3.710e-14
Identity = 60/188 (31.91%), Postives = 82/188 (43.62%), Query Frame = 1
Query:    1 DMYDLVHVDEKWFYIMNDGTGVLPTPCIE-----VQNKYFFSKYMFLVSVAW-LWKFCNGMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD*RGHPRNQDENAILP---------GHPIFVQQDGGNLH---TGKRVMEAIQDVAEYNLAMETEPANPPGLNVNDTGFFQSM 510
            DMY+ +H+DEKWFY+          P  E       +K F  K MFL +VA   +     + FDGK G W  V +V  +R SK    G  +          V          R+     +LP         G  IFVQQD    H   T +   EA++  +  ++ M  +PAN P LN ND GFF+S+
Sbjct:   55 DMYNRIHIDEKWFYMSKTSQKYYLHPLEEEPLRTCHSKRFLPKVMFLSAVARPRFDAAGNVIFDGKIGIWAFVFMVAAQRTSKNRVAGTIEMRPMKSVTKIV---------TRSFLIEKLLPAIKQKWPHDGSTIFVQQDNAKPHISITDREFCEAVRQ-SGMDVQMCFQPANSPDLNTNDLGFFRSI 232          
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: UPI000CD8153E (uncharacterized protein LOC111904485 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD8153E)

HSP 1 Score: 77.4 bits (189), Expect = 6.560e-14
Identity = 57/188 (30.32%), Postives = 89/188 (47.34%), Query Frame = 1
Query:    1 DMYDLVHVDEKWFYIMNDGTG--VLPT---PCIEVQNKYFFSKYMFLVSVAWLWKFCNGMW-FDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD*RGHPRNQDENAILP--------GH--PIFVQQDGGNLHTGKRVMEAIQDVAE--YNLAMETEPANPPGLNVNDTGFFQSM 510
            DM++++H+DEKWFY+        ++P    P    Q+K F +K MFL +VA      +G   F GK G +P   +   KR SK   EG  + +       EV          R+     +LP         H  PIF+QQD  N H      E ++  ++  +++ +  +P+N P LNV D GFF+++
Sbjct:   91 DMFNVIHIDEKWFYMSKPSRRYYLVPDEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVEGTLETKPILSMTKEV---------TRSWLIEKVLPDIRAKWPRSHVGPIFIQQDNTNPHIDVNDNEFLEAASQDGFDIRLNFQPSNSPDLNVLDLGFFRAI 269          
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: I6THG9_PSEMU (Tranposase n=1 Tax=Pseudo-nitzschia multiseries TaxID=37319 RepID=I6THG9_PSEMU)

HSP 1 Score: 78.6 bits (192), Expect = 6.970e-14
Identity = 60/181 (33.15%), Postives = 86/181 (47.51%), Query Frame = 1
Query:    1 DMYDLVHVDEKWFYIM--NDGTGVL---PTPCIEVQNKYFFSKYMFLVSVAWLWKFCN-GMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHG-QWGEVQEGRD*RGHPRNQDENAIL-PGHPIFVQQDGGNLH---TGKRVMEAIQDVAEYNLAMETEPANPPGLNVNDTGFFQSM 510
            DMYD +H+DEKWFY+   N  T +    P P    ++K F  K MFL +VA      +    FDGK G WP V     +R+S     G    +        E Q+    +  P  Q++  +     PIF+Q+D    H   +   V EA ++ A +N+ + T+P N P  NV D GFF S+
Sbjct:  228 DMYDTIHIDEKWFYLKTTNQKTYLCSGEPEPHSTCKSKRFIEKVMFLCAVARPRHDADRNAGFDGKIGIWPFVVKEPAQRNSVNRPRGTMVTKNIPSVNAAEYQKMMLEKVLPAIQEKFPVCWKSRPIFIQEDNAKPHHLRSRAAVREAARE-AGWNITVTTQPPNSPDFNVLDLGFFASI 407          
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: UPI000B909CC2 (uncharacterized protein LOC110944619 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B909CC2)

HSP 1 Score: 75.1 bits (183), Expect = 1.400e-13
Identity = 54/188 (28.72%), Postives = 85/188 (45.21%), Query Frame = 1
Query:    1 DMYDLVHVDEKWFYIMNDGTG--VLP---TPCIEVQNKYFFSKYMFLVSVAW-LWKFCNGMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD*RGHPRNQDENAILPG----------HPIFVQQDGGNLHTGKRVMEAIQDVAE--YNLAMETEPANPPGLNVNDTGFFQSM 510
            DM+++VH+DEKWFY+     G  ++P    P    ++K F +K MFL +VA   +       F GK G +P   +   KR SK    GN + +       EV          R+   + +LP            PIF+QQD           + +Q+ +   +++ +  +P N P LNV D GFF ++
Sbjct:   13 DMFNVVHIDEKWFYMSKSSKGYYLVPGEDEPLRTCKSKKFITKVMFLAAVARPRFDTLGNEIFSGKVGIFPFTKLEPAKRSSKNRVTGNMETKPILSVTKEV---------TRSWLIDKVLPAIRDKWPQDHTGPIFIQQDNAKPQISIDDEQFVQEASRGGFDIRLSFQPPNSPDLNVLDLGFFHAI 191          
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: A0A6D2J0F6_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2J0F6_9BRAS)

HSP 1 Score: 77.0 bits (188), Expect = 2.510e-13
Identity = 56/189 (29.63%), Postives = 85/189 (44.97%), Query Frame = 1
Query:    1 DMYDLVHVDEKWFYIMN--DGTGVLPT---PCIEVQNKYFFSKYMFLVSVAW-LWKFCNGMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD*RGHPRNQDENAILP-----------GHPIFVQQDGGNLHT--GKRVMEAIQDVAEYNLAMETEPANPPGLNVNDTGFFQSM 510
            DMY++VH+DEKWFY+    +   +LP    P    Q+K F +K MFL ++A   +       F GK G +P V +   KR SK    G  + + S             R H ++   N ++P           G  IF+QQD    H   G +  E       +++ +  +P N P LN+ D GFF ++
Sbjct:  314 DMYNIVHIDEKWFYMTKKMEKYYLLPEEEDPHRTCQSKNFITKVMFLAAMARPRFDEEGNETFSGKIGIFPFVSLEPAKRRSKHRAAGTLEWKASTSVK---------REHVKDFLINKVIPVIHERWPKEDLGKTIFIQQDNARTHINCGDKDFEEAASKTGFDIRLMCQPPNSPDLNILDLGFFSAI 493          
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: A0A6G0WC47_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WC47_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.630e-13
Identity = 61/192 (31.77%), Postives = 80/192 (41.67%), Query Frame = 1
Query:    1 DMYDLVHVDEKWFYIMNDGTGV-------LPTPCIEVQNKYFFSKYMFLVSVAWLWKFCNGMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD*RGHPRNQDENAILPG-------------HPIFVQQDGGNLHT--GKRVMEAIQDVAEYNLAMETEPANPPGLNVNDTGFFQSM 510
            DMYD VHVDEKWFY+              LP  C+E  NK    K MFL +VA   +   G  ++GK G W I DIV  KR SK    G P    +             R   R+     +LP                I++QQD    H      ++ A      +++ +  +PA  P LNV D GFF S+
Sbjct:  119 DMYDCVHVDEKWFYVTRTKIRFYLWPDEELPHRCVE--NKGHIEKVMFLYAVA---RPREG--WNGKVGCWEITDIVTAKRTSKNRPAGTPLAVPTTIN----------REKYRSMLMQHVLPAIQSRWIWPSGFSAGTIWIQQDNARSHVLPNDSLVLAAGKEGSWDIRLRNQPAKSPDLNVLDLGFFNSI 293          
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: A0A6A4ZY01_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZY01_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.680e-13
Identity = 59/183 (32.24%), Postives = 84/183 (45.90%), Query Frame = 1
Query:    1 DMYDLVHVDEKWFYIMNDGTGVLPTPCIEVQNKYFFSKY---MFLVSVAW-LWKFCNGMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD*-RGHPRNQDENAILPGHP------IFVQQDGGNLHTGKRVMEAIQDVAEYNLAMET--EPANPPGLNVNDTGFFQSM 510
            DMYD VHVDEKWF++      V      +++ +   SK+   MFL +VA   W    G WFDGK GTW   +IV  +R S +   G P  +T       V   R+  +    ++D  AI    P      + +QQD    H     ++ +         ME   +P N P LNV D GFF+++
Sbjct:   87 DMYDTVHVDEKWFFMTRLQKKVYGAIGEKIKQRACKSKHHLVMFLTAVARPRWDETCGEWFDGKLGTWHFTEIVPAQRRSSRRDAGTPVMKT-------VSVTRETYKAMLVDKDIPAIRAKWPRGDTKAVKIQQDNAQPHVPPSDVDVVAACKADGWDMEVVFQPPNSPDLNVLDLGFFRAI 262          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A4XRJ4_9STRA9.690e-1632.62Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A6A4XMT7_9STRA2.140e-1532.62Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
W4G370_9STRA2.480e-1431.69Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
UPI000E70440D3.710e-1431.91uncharacterized protein LOC113337402 n=1 Tax=Papav... [more]
UPI000CD8153E6.560e-1430.32uncharacterized protein LOC111904485 n=1 Tax=Lactu... [more]
I6THG9_PSEMU6.970e-1433.15Tranposase n=1 Tax=Pseudo-nitzschia multiseries Ta... [more]
UPI000B909CC21.400e-1328.72uncharacterized protein LOC110944619 n=1 Tax=Helia... [more]
A0A6D2J0F6_9BRAS2.510e-1329.63Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A6G0WC47_9STRA2.630e-1331.77Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6A4ZY01_9STRA2.680e-1332.24Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10096contigD-mesarthrocarpus_Contig10096:3088..3615 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog4792.ETI40837
Model size510
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons2
Evalue5.48e-10
EggNOG OGs2CTB4@1|root,2RFQE@2759|Eukaryota,3QH57@4776|Peronosporales
Cds size303
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789154.5576887-UTR-D-mesarthrocarpus_Contig10096:3087..30901680789154.5576887-UTR-D-mesarthrocarpus_Contig10096:3087..3090Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10096 3088..3090 +
1680789154.5965765-UTR-D-mesarthrocarpus_Contig10096:3411..36151680789154.5965765-UTR-D-mesarthrocarpus_Contig10096:3411..3615Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10096 3412..3615 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789154.5716925-CDS-D-mesarthrocarpus_Contig10096:3090..31731680789154.5716925-CDS-D-mesarthrocarpus_Contig10096:3090..3173Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10096 3091..3173 +
1680789154.5816576-CDS-D-mesarthrocarpus_Contig10096:3191..34111680789154.5816576-CDS-D-mesarthrocarpus_Contig10096:3191..3411Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10096 3192..3411 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10096.1.1prot_D-mesarthrocarpus_Contig10096.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10096 3091..3411 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10096.1.1

>prot_D-mesarthrocarpus_Contig10096.1.1 ID=prot_D-mesarthrocarpus_Contig10096.1.1|Name=mRNA_D-mesarthrocarpus_Contig10096.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=101bp
MYDLVHVDEKWFYIMNDGTGVLPTPCIEVQNKYFFSKYMFLVSVAWLWKF
CNGMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD
*
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mRNA from alignment at D-mesarthrocarpus_Contig10096:3088..3615+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10096.1.1 ID=mRNA_D-mesarthrocarpus_Contig10096.1.1|Name=mRNA_D-mesarthrocarpus_Contig10096.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=528bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10096:3088..3615+ (Discosporangium mesarthrocarpum MT17_79)
GACATGTATGACTTGGTCCATGTTGACGAGAAGTGGTTTTACATCATGAA TGATGGGACTGGAGTCTTACCTACACCCTGCATAGAGTGAATCCAAACCC TTAGGGTGCAGAACAAATATTTCTTCTCCAAGTACATGTTCCTTGTTTCT GTGGCATGGCTGTGGAAGTTCTGCAATGGGATGTGGTTTGACGGTAAGAC AGGTACCTGGCCCATTGTGGATATTGTGCTGGTGAAGAGGGACAGCAAGA AAATTCAAGAAGGGAACCCCGACCATGAAACCAGCCATGGTCAATGGGGG GAGGTACAAGAAGGTCGTGATTGAAGAGGTCATCCCCGCAATCAAGATGA GAATGCCATTTTGCCAGGTCACCCGATCTTCGTCCAGCAGGATGGCGGAA ACCTGCACACAGGGAAGAGGGTCATGGAGGCAATCCAGGATGTGGCGGAA TATAACCTTGCAATGGAAACTGAGCCTGCCAACCCACCTGGCCTCAATGT CAATGATACTGGCTTCTTCCAGTCCATG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10096:3088..3615+

>mRNA_D-mesarthrocarpus_Contig10096.1.1 ID=mRNA_D-mesarthrocarpus_Contig10096.1.1|Name=mRNA_D-mesarthrocarpus_Contig10096.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=303bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10096:3088..3615+ (Discosporangium mesarthrocarpum MT17_79)
ATGTATGACTTGGTCCATGTTGACGAGAAGTGGTTTTACATCATGAATGA
TGGGACTGGAGTCTTACCTACACCCTGCATAGAGGTGCAGAACAAATATT
TCTTCTCCAAGTACATGTTCCTTGTTTCTGTGGCATGGCTGTGGAAGTTC
TGCAATGGGATGTGGTTTGACGGTAAGACAGGTACCTGGCCCATTGTGGA
TATTGTGCTGGTGAAGAGGGACAGCAAGAAAATTCAAGAAGGGAACCCCG
ACCATGAAACCAGCCATGGTCAATGGGGGGAGGTACAAGAAGGTCGTGAT
TGA
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