mRNA_D-mesarthrocarpus_Contig10091.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10091.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig10091.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10091.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10091contigD-mesarthrocarpus_Contig10091:1172..3810 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1370
Hectar predicted targeting categoryother localisation
Exons3
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-06_010540.1
Cds size1038
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789154.2458503-UTR-D-mesarthrocarpus_Contig10091:1171..14681680789154.2458503-UTR-D-mesarthrocarpus_Contig10091:1171..1468Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10091 1172..1468 -
1680789154.298078-UTR-D-mesarthrocarpus_Contig10091:3775..38101680789154.298078-UTR-D-mesarthrocarpus_Contig10091:3775..3810Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10091 3776..3810 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789154.2626152-CDS-D-mesarthrocarpus_Contig10091:1468..17201680789154.2626152-CDS-D-mesarthrocarpus_Contig10091:1468..1720Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10091 1469..1720 -
1680789154.274909-CDS-D-mesarthrocarpus_Contig10091:2383..25451680789154.274909-CDS-D-mesarthrocarpus_Contig10091:2383..2545Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10091 2384..2545 -
1680789154.2839274-CDS-D-mesarthrocarpus_Contig10091:3151..37751680789154.2839274-CDS-D-mesarthrocarpus_Contig10091:3151..3775Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10091 3152..3775 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10091.2.1prot_D-mesarthrocarpus_Contig10091.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10091 1469..3775 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10091.2.1

>prot_D-mesarthrocarpus_Contig10091.2.1 ID=prot_D-mesarthrocarpus_Contig10091.2.1|Name=mRNA_D-mesarthrocarpus_Contig10091.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=346bp
MYPLATNENELSDDYNKLNPAEILVEGFKGAPEGEKIQAKQGSNSGTEEC
PALLFDIDPTKPASIIVIVTTVLMVVAMTKCFKSKDRRRTHQPVARQTLC
DADTCAPCKEMGPCSKSPLDAPESAPSRSRIKIATESWSESTQTREVRES
PPPSQVRRPTKKLARKIHRPFKPTPSQAKLCESLYDRWGGQLNKVATASA
EVKASGLTASELSLQFCHIKRERALSSNNASARVPPASPVTMPTPGTLAA
SGARAGAEVRIQGTQAGRRSLRPQRDLHGRETPTKIPVLSRRPPYRSPPR
ASKNKAPMLGLAPKEKGAGSSPSRSPPERSTPKKRGRPSAAELAR*
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mRNA from alignment at D-mesarthrocarpus_Contig10091:1172..3810-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10091.2.1 ID=mRNA_D-mesarthrocarpus_Contig10091.2.1|Name=mRNA_D-mesarthrocarpus_Contig10091.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2639bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10091:1172..3810- (Discosporangium mesarthrocarpum MT17_79)
AGAAACCCTGAGGTTACTCTAAAGGGCCTGTCCAGATGTATCCACTCGCG
ACAAATGAGAACGAGTTGTCAGATGATTATAATAAACTGAATCCTGCAGA
AATCCTGGTAGAGGGTTTCAAGGGGGCACCAGAGGGGGAAAAGATACAGG
CCAAGCAAGGTTCAAATTCGGGTACGGAGGAGTGCCCCGCGTTGCTCTTC
GATATCGATCCAACTAAGCCTGCTTCAATCATCGTGATCGTTACAACAGT
TTTAATGGTGGTCGCAATGACGAAATGCTTCAAAAGCAAAGATAGACGGA
GGACCCACCAGCCCGTAGCCAGGCAGACTCTATGCGACGCTGACACTTGC
GCCCCGTGCAAAGAAATGGGACCCTGCTCGAAATCTCCTCTGGATGCTCC
AGAATCAGCACCCTCTCGATCGAGAATCAAAATTGCTACCGAGAGTTGGT
CTGAATCAACGCAGACGAGAGAAGTAAGGGAATCACCACCACCCAGCCAA
GTACGGCGACCCACGAAGAAGTTGGCGCGGAAGATACACCGTCCTTTCAA
GCCCACCCCCTCGCAGGCGAAGTTATGCGAGAGCCTATATGACAGATGGG
GAGGACAGCTGAATAAGGTTGCCACAGCGAGCGCAGAGGTTAAGGCCAGT
GGATTGACGGTGCGTGTGCTCCATCTTTATTTTCATTTTATGTACAGTTA
CTGAGTTTAGAGTAAATTGACCGTCCATGTAAACAAATTTCCATATCCTT
CATCCTCCCCCTCAACCCCGCCTAGTTGCAATATGAGCATTCTCCATGGT
GACACAGAATGAAGTCGTTGCCATGGTACACCTTACGGTTTACGTCGTCT
CGCTGTGATGTTTGAGTTGCCTGCAAACTTGAACAAGAAGATAGGTTTTA
TTTTGTTTGATTATGGAAAGGGGTATGGTATCTTTCTACCTTGTCACCCC
CAGTTACCATTGATCATGTGTGTCTCTCTCACCATGAGCTTCACCGACAG
TTATGGGGTACACCATTGCTGAGCAGATTCGGCTCCATTGCCCAGTTGCT
GTTTTCGTTGAGAGATTGTGTGGACCACATGACCAGCTCAGACGCATCTT
CTTGGTAGCAGAGGACACACGCATGCAACACAGGGATGTGGCCCGAGGAG
GATGTATATTTAATACGCATGTGCACGTATCCACGTGCTTTCTCTGGCTC
TTTTCCGCTGCACCTAGCACACATGTCTTCCGCAATCTCTTCACGCACCT
TTTTTTTGTCAAAAGGCCTCGGAGCTGTCTCTTCAATTCTGTCACATCAA
GCGGGAGAGAGCCTTGTCTAGCAACAATGCCTCTGCTCGGGTCCCTCCGG
CCTCGCCGGTGACAATGCCTACTCCCGGAACATTGGCAGCTTCAGGGGCC
AGGGCAGGGGCGGAGGTACGCATCCAGGTATCGGTGCTTTTGCAGTTTGT
GTCCAGGTGGAGTGTTCTTTCATGCTTTGAAGGGGGTGGGTGGGGGCAGG
TCAAGCGGGAATTATGGCTCGCAGCAGTACCAGGCGGGCTATGCTAGAAA
CTATGTGGCTCCAAGTATCTTGTTTTAAGTATGCCATGTTGTTGTTCAAC
ACAGGCTCATCAGAAGGTGTAGCTAGAGCTCAGAGTTATCAACTGCAACA
AGGTCTACGACCCGAGGTGTTTCTCCAGTGGTGGGTGGGGGGAGACAAGA
GACGCACCGGGTTGGTTCGAGAAGACGCGCGCTCTTTTTATTTGATGGGT
GAAGGGTGCAGGTCAGCGGGTTAACCGGGAAGGCTTGATGCTGCCAAGAG
CCTGCCAACGTCAAGTGATGCCAGGAACTTCAGCCCTGAGGTACTACATG
CACAGCCCCAGAGCACTTCAAAGGGTTTGCACACAAGGCACATGGCACAT
GCATCCGTGCATAGCGGTTAGGGATAGGTTTTTTTTCCGTAATTCATGCA
CGCACATGCATCGGCACAAGGCTTCTTGGTTTCGAGAGGAGCTGTGCTCG
ATACAACTCCGATTCACTCAGTCCCGCTTCACTCTGCCCCTCCTGCTCTC
TCATCTGCTACCTGACACCGGGTGTGTCTGACATCCACAGGGTACCCAAG
CTGGGAGGCGTTCACTCCGCCCACAGCGTGATTTGCACGGGAGAGAAACG
CCTACCAAGATCCCAGTGCTTTCCAGAAGACCTCCCTACCGGTCCCCGCC
GAGAGCATCCAAGAACAAGGCCCCCATGCTGGGACTTGCGCCCAAAGAGA
AGGGTGCTGGGTCTTCTCCGAGCAGATCACCACCAGAAAGATCAACACCC
AAGAAGAGAGGGAGGCCCTCAGCAGCCGAGCTGGCCAGGTGAGGCTTATG
ATGTCAGAGGTGGGCGAACGGACATGCATGTAAGTGCCACACCAGATCTC
TCTTGATGTCACATATGTTGAGCATAGTTGGATAGTCTGTGGCATCACTG
ACTACCTTGCCCCTTCAAAGCTTCCCATAACGCTTCTCAAGAGCCAGTTT
GAGGGTCTGAGGCGGTCAGCCGAGGCTGATTGGGTTGGTTGTGTTTGCCG
TCCCAGCTCACCTGCTGCACTCATGCCGCCACGATGCTCGTGTTCACCCT
CTCCTCAGGGAGTGCACAGCATGGCAGCTTTAAGAACCC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10091:1172..3810-

>mRNA_D-mesarthrocarpus_Contig10091.2.1 ID=mRNA_D-mesarthrocarpus_Contig10091.2.1|Name=mRNA_D-mesarthrocarpus_Contig10091.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1038bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10091:1172..3810- (Discosporangium mesarthrocarpum MT17_79)
ATGTATCCACTCGCGACAAATGAGAACGAGTTGTCAGATGATTATAATAA
ACTGAATCCTGCAGAAATCCTGGTAGAGGGTTTCAAGGGGGCACCAGAGG
GGGAAAAGATACAGGCCAAGCAAGGTTCAAATTCGGGTACGGAGGAGTGC
CCCGCGTTGCTCTTCGATATCGATCCAACTAAGCCTGCTTCAATCATCGT
GATCGTTACAACAGTTTTAATGGTGGTCGCAATGACGAAATGCTTCAAAA
GCAAAGATAGACGGAGGACCCACCAGCCCGTAGCCAGGCAGACTCTATGC
GACGCTGACACTTGCGCCCCGTGCAAAGAAATGGGACCCTGCTCGAAATC
TCCTCTGGATGCTCCAGAATCAGCACCCTCTCGATCGAGAATCAAAATTG
CTACCGAGAGTTGGTCTGAATCAACGCAGACGAGAGAAGTAAGGGAATCA
CCACCACCCAGCCAAGTACGGCGACCCACGAAGAAGTTGGCGCGGAAGAT
ACACCGTCCTTTCAAGCCCACCCCCTCGCAGGCGAAGTTATGCGAGAGCC
TATATGACAGATGGGGAGGACAGCTGAATAAGGTTGCCACAGCGAGCGCA
GAGGTTAAGGCCAGTGGATTGACGGCCTCGGAGCTGTCTCTTCAATTCTG
TCACATCAAGCGGGAGAGAGCCTTGTCTAGCAACAATGCCTCTGCTCGGG
TCCCTCCGGCCTCGCCGGTGACAATGCCTACTCCCGGAACATTGGCAGCT
TCAGGGGCCAGGGCAGGGGCGGAGGTACGCATCCAGGGTACCCAAGCTGG
GAGGCGTTCACTCCGCCCACAGCGTGATTTGCACGGGAGAGAAACGCCTA
CCAAGATCCCAGTGCTTTCCAGAAGACCTCCCTACCGGTCCCCGCCGAGA
GCATCCAAGAACAAGGCCCCCATGCTGGGACTTGCGCCCAAAGAGAAGGG
TGCTGGGTCTTCTCCGAGCAGATCACCACCAGAAAGATCAACACCCAAGA
AGAGAGGGAGGCCCTCAGCAGCCGAGCTGGCCAGGTGA
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