Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10070.1.1 vs. uniprot
Match:
A0A7S0IFV4_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IFV4_MICPS)
HSP 1 Score: 71.6 bits (174), Expect = 6.270e-13
Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 4 LTQQVLDGVFKHRYKDVSSTVREEALSAMGRWMLILPKAFLQDATVRYLGWSLSDKSSNVRMAVL 198
+ +QV + +F HR++DV T+R + A+GRWM P FL D ++YLGWSL+DK S+VR+A L
Sbjct: 285 MIRQVFEKIFTHRFRDVDPTIRAACIKALGRWMHDHPLLFLSDYFLKYLGWSLNDKDSSVRLAAL 349
BLAST of mRNA_D-mesarthrocarpus_Contig10070.1.1 vs. uniprot
Match:
A0A8J5KE34_ZINOF (SCD domain-containing protein n=4 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5KE34_ZINOF)
HSP 1 Score: 70.1 bits (170), Expect = 2.180e-12
Identity = 28/63 (44.44%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 4 LTQQVLDGVFKHRYKDVSSTVREEALSAMGRWMLILPKAFLQDATVRYLGWSLSDKSSNVRMA 192
+ +++ G+F HRY+DV +R +S++G W+L+ P FLQD ++YLGW+L+DKS VR A
Sbjct: 279 MMRKLFKGLFMHRYRDVDPEIRMSCISSLGNWILLYPSLFLQDLYLKYLGWTLNDKSPGVRKA 341
BLAST of mRNA_D-mesarthrocarpus_Contig10070.1.1 vs. uniprot
Match:
A0A397JIC3_9GLOM (SCD domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397JIC3_9GLOM)
HSP 1 Score: 69.7 bits (169), Expect = 3.000e-12
Identity = 32/68 (47.06%), Postives = 42/68 (61.76%), Query Frame = 1
Query: 1 SLTQQVLDGVFKHRYKDVSSTVREEALSAMGRWMLILPKAFLQDATVRYLGWSLSDKSSNVRMAVLQV 204
S + DGVF HRY+DV +R E + +G W++ P FL D +RYLGW LSDKS VR+ L+V
Sbjct: 377 SYFDDLFDGVFVHRYRDVEPIIRSECIKELGVWIIRHPDRFLGDTIIRYLGWQLSDKSPIVRLESLKV 444
BLAST of mRNA_D-mesarthrocarpus_Contig10070.1.1 vs. uniprot
Match:
A0A4U5LQV9_STECR (SCD domain-containing protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5LQV9_STECR)
HSP 1 Score: 69.3 bits (168), Expect = 4.080e-12
Identity = 28/70 (40.00%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 4 LTQQVLDGVFKHRYKDVSSTVREEALSAMGRWMLILPKAFLQDATVRYLGWSLSDKSSNVRMAVLQVNLP 213
+ Q V VF HRY+D+ +R ++ +G W+ + P+AFL+D+ ++Y+GW L DK+S+VRM L +P
Sbjct: 341 MIQYVFKSVFVHRYRDIVPEIRSVSIEELGHWIYLFPEAFLEDSYLKYIGWMLYDKNSDVRMKCLGALIP 410
BLAST of mRNA_D-mesarthrocarpus_Contig10070.1.1 vs. uniprot
Match:
A0A811LFD0_9BILA (Hypothetical protein n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811LFD0_9BILA)
HSP 1 Score: 68.9 bits (167), Expect = 5.560e-12
Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 4 LTQQVLDGVFKHRYKDVSSTVREEALSAMGRWMLILPKAFLQDATVRYLGWSLSDKSSNVRMAVLQVNLP 213
+ Q V VF HRY+D+ S VR +S +G+WML+ P+ FL D+ ++Y+GW L DK+S VR + +P
Sbjct: 275 MIQYVFKHVFAHRYRDIISDVRCVCISELGKWMLVYPQLFLDDSYLKYVGWLLYDKNSEVRQRCINCLIP 344
BLAST of mRNA_D-mesarthrocarpus_Contig10070.1.1 vs. uniprot
Match:
UPI00053F2D46 (sister-chromatid cohesion protein 3 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F2D46)
HSP 1 Score: 68.9 bits (167), Expect = 5.570e-12
Identity = 27/63 (42.86%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 4 LTQQVLDGVFKHRYKDVSSTVREEALSAMGRWMLILPKAFLQDATVRYLGWSLSDKSSNVRMA 192
+ ++ G+F HRY+D+ S +R + ++G W+L P FLQD ++YLGW+L+DKS+ VR A
Sbjct: 275 MMDKIFKGLFMHRYRDIDSNIRVSCIQSLGVWILSYPSLFLQDRYLKYLGWTLNDKSAGVRKA 337
BLAST of mRNA_D-mesarthrocarpus_Contig10070.1.1 vs. uniprot
Match:
A0A5C7I211_9ROSI (SCD domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7I211_9ROSI)
HSP 1 Score: 68.9 bits (167), Expect = 5.580e-12
Identity = 27/65 (41.54%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 4 LTQQVLDGVFKHRYKDVSSTVREEALSAMGRWMLILPKAFLQDATVRYLGWSLSDKSSNVRMAVL 198
+ +++ G+F HRY+D+ T+R + ++G W+L P FLQD ++YLGW+L+DKS+ VR A +
Sbjct: 274 MMRKIFTGLFVHRYRDIDPTIRMSCIKSLGVWILSYPSFFLQDLYLKYLGWTLNDKSAGVRKAAV 338
BLAST of mRNA_D-mesarthrocarpus_Contig10070.1.1 vs. uniprot
Match:
A0A068U4X5_COFCA (SCD domain-containing protein n=4 Tax=Coffea TaxID=13442 RepID=A0A068U4X5_COFCA)
HSP 1 Score: 68.6 bits (166), Expect = 7.620e-12
Identity = 27/63 (42.86%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 4 LTQQVLDGVFKHRYKDVSSTVREEALSAMGRWMLILPKAFLQDATVRYLGWSLSDKSSNVRMA 192
+ +++ G+F HRY+D+ +R + ++G W+L+ P FLQD ++YLGW+L+DKSS VR A
Sbjct: 285 MMRKLFTGLFVHRYRDIDPEIRMSCIQSLGVWILLYPSLFLQDLYLKYLGWTLNDKSSGVRKA 347
BLAST of mRNA_D-mesarthrocarpus_Contig10070.1.1 vs. uniprot
Match:
A0A830CXN2_9LAMI (Sister-chromatid cohesion protein 3 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830CXN2_9LAMI)
HSP 1 Score: 68.6 bits (166), Expect = 7.670e-12
Identity = 27/63 (42.86%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 4 LTQQVLDGVFKHRYKDVSSTVREEALSAMGRWMLILPKAFLQDATVRYLGWSLSDKSSNVRMA 192
+ +++ G+F HRY+D+ +R + ++G W+L P FLQD ++YLGW+L+DKSS VR A
Sbjct: 4 MMRKIFQGLFVHRYRDIDQDIRMSCIESLGVWVLSYPSLFLQDLYLKYLGWTLNDKSSGVRKA 66
BLAST of mRNA_D-mesarthrocarpus_Contig10070.1.1 vs. uniprot
Match:
UPI00053C1DBB (sister-chromatid cohesion protein 3 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C1DBB)
HSP 1 Score: 68.2 bits (165), Expect = 1.040e-11
Identity = 27/65 (41.54%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 4 LTQQVLDGVFKHRYKDVSSTVREEALSAMGRWMLILPKAFLQDATVRYLGWSLSDKSSNVRMAVL 198
+ +++ G+F HRY+D+ ++R + ++G W+L P FLQD ++YLGW+L+DKS+ VR A L
Sbjct: 276 MMRKIFTGLFVHRYRDIDPSIRMSCIQSLGIWILSYPSLFLQDLYLKYLGWTLNDKSAGVRKASL 340
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10070.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 6.27e-13 / Id = 47.69 Expect = 2.18e-12 / Id = 44.44 Expect = 3.00e-12 / Id = 47.06 Expect = 4.08e-12 / Id = 40.00 Expect = 5.56e-12 / Id = 42.86 Expect = 5.57e-12 / Id = 42.86 Expect = 5.58e-12 / Id = 41.54 Expect = 7.62e-12 / Id = 42.86 Expect = 7.67e-12 / Id = 42.86 Expect = 1.04e-11 / Id = 41.54 Sequence A0A7S0IFV4_MICPS A0A8J5KE34_ZINOF A0A397JIC3_9GLOM A0A4U5LQV9_STECR A0A811LFD0_9BILA UPI00053F2D46 A0A5C7I211_9ROSI A0A068U4X5_COFCA A0A830CXN2_9LAMI UPI00053C1DBB Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10070.1.1
>prot_D-mesarthrocarpus_Contig10070.1.1 ID=prot_D-mesarthrocarpus_Contig10070.1.1|Name=mRNA_D-mesarthrocarpus_Contig10070.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=71bp
SLTQQVLDGVFKHRYKDVSSTVREEALSAMGRWMLILPKAFLQDATVRYL back to top mRNA from alignment at D-mesarthrocarpus_Contig10070:3687..4363+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10070.1.1 ID=mRNA_D-mesarthrocarpus_Contig10070.1.1|Name=mRNA_D-mesarthrocarpus_Contig10070.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=677bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10070:3687..4363+ (Discosporangium mesarthrocarpum MT17_79)TCCTTAACCCAGCAGGTGCTAGATGGGGTGTTCAAGCACCGGTACAAGGA
CGTCAGCAGCACAGTTAGGGAGGAGGCACTCTCTGCCATGGGGCGGTGGA
TGTTGATCCTGCCAAAGGCCTTCCTGCAG GTGCTCTTTTTTTTTTACCCC
TCAAGTGCTGGGGTTAGGTTAGGGTTGGGATTAGGACTACGGTAAAGGTG
TCGCAGGGTTCATTTGCCACTAGATTGAAGACAGGTATAATACCTCCTGC
TCCTTTGCCTATCCTTATCCTTGCCCCAACCTGAACCCTAACCCTAACTT
GAGCACGTGATCAGTTTTCGGGTGTCTGCTTGGGTTAGGCTTAGTCCTAG
GCTGTATGCCTGCTGTATGGTAAAGCTATCCTTTGTAACGAAACTCAATG
TAAACATATCCTCTACCTTACCACTATGCTCTACGCTTATTGTTGAGCTG
TGGATAGACCCTCTACTCCACCACTATGCTATATATCATTGAAGTGTAGA
CAAATTCCCTAACCCTAAGCTTCCTTCAAACAATCGTCTGCCTCATCTAC
CTTGTCAGTAACATCCCATCTTTATCTCCATCTCCATGTGTAGGATGCAA
CTGTTAGATACCTCGGGTGGAGCCTCAGTGACAAGTCCAGCAATGTCAGG
ATGGCCGTCTTGCAGGTGAACCTCCCC back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10070:3687..4363+
>mRNA_D-mesarthrocarpus_Contig10070.1.1 ID=mRNA_D-mesarthrocarpus_Contig10070.1.1|Name=mRNA_D-mesarthrocarpus_Contig10070.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=213bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10070:3687..4363+ (Discosporangium mesarthrocarpum MT17_79) back to top