mRNA_D-mesarthrocarpus_Contig10064.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10064.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig10064.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10064.2.1 vs. uniprot
Match: A0A2L0AUS7_9CUCU (Isocitrate dehydrogenase (NADP(+)) (Fragment) n=1 Tax=Chlorophila sp. INB046 TaxID=2055355 RepID=A0A2L0AUS7_9CUCU)

HSP 1 Score: 152 bits (384), Expect = 1.440e-44
Identity = 72/86 (83.72%), Postives = 80/86 (93.02%), Query Frame = 1 
Query:    1 YDGRFKDLFQEIYEDEYQEQFEARGITYTHRLIDDMVAQSLKSAGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVAPDGKTVE 258
            YDGRFKD+FQEIYE +Y+ QFEA+ I Y HRLIDDMVAQ+LKS+GGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVL+ PDGKT+E
Sbjct:  137 YDGRFKDIFQEIYEKQYKPQFEAKKIWYEHRLIDDMVAQALKSSGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLMCPDGKTIE 222
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BLAST of mRNA_D-mesarthrocarpus_Contig10064.2.1 vs. uniprot
Match: A0A293MRS1_ORNER (Isocitrate dehydrogenase (NADP(+)) (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MRS1_ORNER)

HSP 1 Score: 152 bits (384), Expect = 1.800e-44
Identity = 70/86 (81.40%), Postives = 80/86 (93.02%), Query Frame = 1 
Query:    1 YDGRFKDLFQEIYEDEYQEQFEARGITYTHRLIDDMVAQSLKSAGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVAPDGKTVE 258
            YDGRFKD+FQEIY+ EY+ Q+EA+GI Y HRLIDDMVAQ++KS+GGFVWACKNYDGDVQSD VAQGYGSLG+MTSVLV PDGKT+E
Sbjct:  129 YDGRFKDIFQEIYDKEYKSQYEAKGIWYEHRLIDDMVAQAMKSSGGFVWACKNYDGDVQSDAVAQGYGSLGMMTSVLVCPDGKTIE 214
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BLAST of mRNA_D-mesarthrocarpus_Contig10064.2.1 vs. uniprot
Match: A0A024GKV9_9STRA (Isocitrate dehydrogenase [NADP] n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GKV9_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.830e-44
Identity = 73/86 (84.88%), Postives = 83/86 (96.51%), Query Frame = 1 
Query:    1 YDGRFKDLFQEIYEDEYQEQFEARGITYTHRLIDDMVAQSLKSAGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVAPDGKTVE 258
            YDGRFKD+F+++Y+DEY+ +F+A GI+YTHRLIDDMVAQ+LKS GGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVAPDGKTVE
Sbjct:  244 YDGRFKDIFEQVYQDEYKAKFDAAGISYTHRLIDDMVAQALKSEGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVAPDGKTVE 329
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BLAST of mRNA_D-mesarthrocarpus_Contig10064.2.1 vs. uniprot
Match: A0A0S7K3V0_9TELE (Isocitrate dehydrogenase (NADP(+)) n=6 Tax=Percomorphaceae TaxID=1489872 RepID=A0A0S7K3V0_9TELE)

HSP 1 Score: 152 bits (384), Expect = 2.940e-44
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 1 
Query:    1 YDGRFKDLFQEIYEDEYQEQFEARGITYTHRLIDDMVAQSLKSAGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVAPDGKTVE 258
            YDGRFKD+FQEIYE EY+ QFEA+GI Y HRLIDDMVAQ+LKS GGF+WACKNYDGDVQSD VAQGYGSLG+MTSVL+ PDG+TVE
Sbjct:   65 YDGRFKDIFQEIYEKEYRPQFEAKGIWYEHRLIDDMVAQALKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICPDGRTVE 150
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BLAST of mRNA_D-mesarthrocarpus_Contig10064.2.1 vs. uniprot
Match: D7G2Q2_ECTSI (Isocitrate dehydrogenase [NADP] n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2Q2_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 4.840e-44
Identity = 77/86 (89.53%), Postives = 80/86 (93.02%), Query Frame = 1 
Query:    1 YDGRFKDLFQEIYEDEYQEQFEARGITYTHRLIDDMVAQSLKSAGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVAPDGKTVE 258
            YDGRFKD+FQEI      EQFEARGITYTHRLIDDMVAQSLKSAGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVL+APDG+TVE
Sbjct:  260 YDGRFKDIFQEIXXXXXXEQFEARGITYTHRLIDDMVAQSLKSAGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLLAPDGRTVE 345
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BLAST of mRNA_D-mesarthrocarpus_Contig10064.2.1 vs. uniprot
Match: UPI000C6D195A (isocitrate dehydrogenase [NADP] cytoplasmic-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D195A)

HSP 1 Score: 150 bits (380), Expect = 5.050e-44
Identity = 69/86 (80.23%), Postives = 80/86 (93.02%), Query Frame = 1 
Query:    1 YDGRFKDLFQEIYEDEYQEQFEARGITYTHRLIDDMVAQSLKSAGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVAPDGKTVE 258
            YDGRFKD+FQEIY+ EY+++FE++GI Y HRLIDDMVAQ+LKS GGFVWACKNYDGDVQSD VAQGYGSLG+MTSVL+ PDGKT+E
Sbjct:   38 YDGRFKDIFQEIYDKEYKQKFESKGIWYEHRLIDDMVAQALKSEGGFVWACKNYDGDVQSDSVAQGYGSLGMMTSVLICPDGKTIE 123
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BLAST of mRNA_D-mesarthrocarpus_Contig10064.2.1 vs. uniprot
Match: UPI000497A13C (isocitrate dehydrogenase [NADP] cytoplasmic-like n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=UPI000497A13C)

HSP 1 Score: 148 bits (374), Expect = 5.420e-44
Identity = 69/86 (80.23%), Postives = 78/86 (90.70%), Query Frame = 1 
Query:    1 YDGRFKDLFQEIYEDEYQEQFEARGITYTHRLIDDMVAQSLKSAGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVAPDGKTVE 258
            YDGRFKD+FQEIYE EY+ QFEA+ I Y HRLIDDMVAQ++KS GGF+WACKNYDGDVQSD VAQGYGSLG+MTSVL+ PDG+TVE
Sbjct:   53 YDGRFKDIFQEIYEKEYKAQFEAKKIWYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICPDGRTVE 138
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BLAST of mRNA_D-mesarthrocarpus_Contig10064.2.1 vs. uniprot
Match: A0A2L0AUI5_9COLE (Isocitrate dehydrogenase (NADP(+)) (Fragment) n=2 Tax=Elmidae TaxID=186980 RepID=A0A2L0AUI5_9COLE)

HSP 1 Score: 150 bits (379), Expect = 1.110e-43
Identity = 70/86 (81.40%), Postives = 81/86 (94.19%), Query Frame = 1 
Query:    1 YDGRFKDLFQEIYEDEYQEQFEARGITYTHRLIDDMVAQSLKSAGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVAPDGKTVE 258
            YDGRFKD+FQ+IY++EY++QFEA+ I Y HRLIDDMVAQ++KS GGFVWACKNYDGDVQSD VAQGYGSLGLMTSVL++PDGKTVE
Sbjct:  137 YDGRFKDIFQDIYDNEYKKQFEAKKIWYEHRLIDDMVAQAMKSEGGFVWACKNYDGDVQSDSVAQGYGSLGLMTSVLISPDGKTVE 222
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BLAST of mRNA_D-mesarthrocarpus_Contig10064.2.1 vs. uniprot
Match: A0A662YWP9_ACIRT (Isocitrate dehydrogenase (NADP(+)) n=10 Tax=Actinopterygii TaxID=7898 RepID=A0A662YWP9_ACIRT)

HSP 1 Score: 153 bits (386), Expect = 1.190e-43
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 1 
Query:    1 YDGRFKDLFQEIYEDEYQEQFEARGITYTHRLIDDMVAQSLKSAGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVAPDGKTVE 258
            YDGRFKD+FQEIYE EY+ QFEA+GI Y HRLIDDMVAQ++KS GGF+WACKNYDGDVQSD VAQGYGSLG+MTSVL+ PDGKTVE
Sbjct:  207 YDGRFKDIFQEIYEKEYKSQFEAKGIWYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICPDGKTVE 292
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BLAST of mRNA_D-mesarthrocarpus_Contig10064.2.1 vs. uniprot
Match: A0A671YIS4_SPAAU (Isocitrate dehydrogenase (NADP(+)) n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671YIS4_SPAAU)

HSP 1 Score: 151 bits (382), Expect = 1.220e-43
Identity = 70/86 (81.40%), Postives = 79/86 (91.86%), Query Frame = 1 
Query:    1 YDGRFKDLFQEIYEDEYQEQFEARGITYTHRLIDDMVAQSLKSAGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVAPDGKTVE 258
            YDGRFKD+FQEIYE EY+ QFEA+GI Y HRLIDDMVAQ++KS GGF+WACKNYDGDVQSD VAQGYGSLG+MTSVL+ PDG+TVE
Sbjct:   93 YDGRFKDIFQEIYEKEYRAQFEAKGIWYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICPDGRTVE 178
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10064.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2L0AUS7_9CUCU1.440e-4483.72Isocitrate dehydrogenase (NADP(+)) (Fragment) n=1 ... [more]
A0A293MRS1_ORNER1.800e-4481.40Isocitrate dehydrogenase (NADP(+)) (Fragment) n=1 ... [more]
A0A024GKV9_9STRA1.830e-4484.88Isocitrate dehydrogenase [NADP] n=2 Tax=Albugo can... [more]
A0A0S7K3V0_9TELE2.940e-4482.56Isocitrate dehydrogenase (NADP(+)) n=6 Tax=Percomo... [more]
D7G2Q2_ECTSI4.840e-4489.53Isocitrate dehydrogenase [NADP] n=2 Tax=Ectocarpus... [more]
UPI000C6D195A5.050e-4480.23isocitrate dehydrogenase [NADP] cytoplasmic-like n... [more]
UPI000497A13C5.420e-4480.23isocitrate dehydrogenase [NADP] cytoplasmic-like n... [more]
A0A2L0AUI5_9COLE1.110e-4381.40Isocitrate dehydrogenase (NADP(+)) (Fragment) n=2 ... [more]
A0A662YWP9_ACIRT1.190e-4382.56Isocitrate dehydrogenase (NADP(+)) n=10 Tax=Actino... [more]
A0A671YIS4_SPAAU1.220e-4381.40Isocitrate dehydrogenase (NADP(+)) n=1 Tax=Sparus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10064contigD-mesarthrocarpus_Contig10064:879..1609 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G2Q2
Preferred nameIDP1
PFAMsIso_dh
Model size267
Max annot lvl2759|Eukaryota
KEGG rclassRC00001,RC00084,RC00114,RC00626,RC02801
KEGG koko:K00031
KEGG ReactionR00267,R00268,R01899
KEGG Pathwayko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146
KEGG ModuleM00009,M00010,M00173,M00740
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004448,GO:0004450,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005777,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006102,GO:0006139,GO:0006520,GO:0006536,GO:0006537,GO:0006629,GO:0006631,GO:0006635,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006740,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009060,GO:0009062,GO:0009064,GO:0009084,GO:0009117,GO:0009295,GO:0009987,GO:0015980,GO:0016042,GO:0016053,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016999,GO:0017144,GO:0019362,GO:0019395,GO:0019637,GO:0019752,GO:0030258,GO:0031974,GO:0032787,GO:0034440,GO:0034641,GO:0042579,GO:0042645,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046394,GO:0046395,GO:0046483,GO:0046496,GO:0051186,GO:0055086,GO:0055114,GO:0070013,GO:0071704,GO:0072329,GO:0072350,GO:0072524,GO:1901360,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901607
Exons2
Evalue7.93e-45
EggNOG OGsCOG0538@1|root,KOG1526@2759|Eukaryota
EC1.1.1.42
Descriptionisocitrate dehydrogenase (NADP ) activity
Cds size267
COG categoryC
BiGG ReactioniMM904.YLR174W,iND750.YLR174W
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789152.5853074-CDS-D-mesarthrocarpus_Contig10064:878..10121680789152.5853074-CDS-D-mesarthrocarpus_Contig10064:878..1012Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10064 879..1012 -
1680789152.6031766-CDS-D-mesarthrocarpus_Contig10064:1476..16091680789152.6031766-CDS-D-mesarthrocarpus_Contig10064:1476..1609Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10064 1477..1609 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10064.2.1prot_D-mesarthrocarpus_Contig10064.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10064 879..1609 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10064.2.1

>prot_D-mesarthrocarpus_Contig10064.2.1 ID=prot_D-mesarthrocarpus_Contig10064.2.1|Name=mRNA_D-mesarthrocarpus_Contig10064.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=89bp
YDGRFKDLFQEIYEDEYQEQFEARGITYTHRLIDDMVAQSLKSAGGFVWA
CKNYDGDVQSDIVAQGYGSLGLMTSVLVAPDGKTVEVC*
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mRNA from alignment at D-mesarthrocarpus_Contig10064:879..1609-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10064.2.1 ID=mRNA_D-mesarthrocarpus_Contig10064.2.1|Name=mRNA_D-mesarthrocarpus_Contig10064.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=731bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10064:879..1609- (Discosporangium mesarthrocarpum MT17_79)
TATGATGGTCGCTTCAAGGACCTCTTCCAGGAGATCTATGAGGATGAGTA
CCAGGAGCAGTTTGAGGCTAGGGGCATCACCTACACCCACCGCCTCATTG
ATGACATGGTGGCGCAGTCCCTCAAGTCTGCCGGTGCGTTTATAGAGCCA
TTTATTTGGACCTAAAGGCGGGCATTGTATTGCTTTAATTTTGTGGGTTT
TCTGTGGGTAGTGACAGGGCAGTTAATGGGTGCTGAGCATGACATTTACA
GGGCAGTTACAAGAGTAAGATGTAAAATGCCTGTGTTTGACAGTCAGAGT
TGGGAGGAAGAGATGAGTTGGTAGTAGAACCACCCAGAGTTGGTAGTAGA
AGAGGTGGGCATGGATGCACTGGGTGGTTCTGACCATGATGCGTGGTCCC
TTCAGAGTGGAACCTGCACAATGCTGCTGTCTGTCTGCTCTACAGAGCTT
GCCCCTCACACTGAGGGCATTCACAAACACCCTGTTGACCATCGGTGATA
AAATTTTGTTCAGGTCCTATCACCGCTGTTTCTTGTTGGGCGCTGATCCC
CCCCCCCGCCCCCGCCCCATGGGGTTTGAATGCTGGCTATCTTTCAGGTG
GCTTTGTGTGGGCATGCAAGAACTATGATGGTGATGTGCAGTCAGACATT
GTTGCCCAGGGGTACGGATCACTCGGGCTGATGACCAGTGTGCTCGTGGC
CCCTGATGGGAAGACCGTGGAGGTGTGCTAA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10064:879..1609-

>mRNA_D-mesarthrocarpus_Contig10064.2.1 ID=mRNA_D-mesarthrocarpus_Contig10064.2.1|Name=mRNA_D-mesarthrocarpus_Contig10064.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=267bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10064:879..1609- (Discosporangium mesarthrocarpum MT17_79)
TATGATGGTCGCTTCAAGGACCTCTTCCAGGAGATCTATGAGGATGAGTA
CCAGGAGCAGTTTGAGGCTAGGGGCATCACCTACACCCACCGCCTCATTG
ATGACATGGTGGCGCAGTCCCTCAAGTCTGCCGGTGGCTTTGTGTGGGCA
TGCAAGAACTATGATGGTGATGTGCAGTCAGACATTGTTGCCCAGGGGTA
CGGATCACTCGGGCTGATGACCAGTGTGCTCGTGGCCCCTGATGGGAAGA
CCGTGGAGGTGTGCTAA
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