prot_D-mesarthrocarpus_Contig10054.1.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10054.1.1
Unique Nameprot_D-mesarthrocarpus_Contig10054.1.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length322
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A7S1XVH2_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVH2_9STRA)

HSP 1 Score: 391 bits (1005), Expect = 1.010e-133
Identity = 197/287 (68.64%), Postives = 228/287 (79.44%), Query Frame = 0
Query:   44 LDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLR--EMAGGRNRRGGESRVP-AHLKFSNQKPG---AARGMKLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGV--EGAGKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 322
            +DPTNMLSL+ASLTPFSD NQSPRNMYQCQMGKQTMGTPAH M PHRTDNKMYKI  PQA IVQT+RH E+QLD+YPQGTNAVVAVISYTGFDMEDAMILNKGS+ERGFGHASV K    +L   E  G +NR GG   +   +L+ +  +PG        K+Y++LD DGL  VG+WV+ GD +YC +D V+G+   GKHKE+E+AC++ VR +G   + +G     RVS TLRFPRNP+IGDKFSSRHGQKGVMSILWP EDMPFSESGI+PDVIINPHAFPSRM
Sbjct:    1 MDPTNMLSLIASLTPFSDQNQSPRNMYQCQMGKQTMGTPAHSM-PHRTDNKMYKIQTPQAPIVQTKRHAEYQLDEYPQGTNAVVAVISYTGFDMEDAMILNKGSYERGFGHASVYKAKIVNLEDEEKKGSQNRDGGRPSLRFGNLRRTPAEPGNPLIGGEQKIYDNLDADGLPAVGTWVQEGDPLYCTIDSVSGEAHAGKHKETERACIQDVRLLGPADQRSGNEECRRVSMTLRFPRNPIIGDKFSSRHGQKGVMSILWPQEDMPFSESGITPDVIINPHAFPSRM 286          
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A835YVF9_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF9_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 1.090e-133
Identity = 202/297 (68.01%), Postives = 238/297 (80.13%), Query Frame = 0
Query:   26 KIACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGGESRVPAHLKFSNQKPGAARGMKLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGAGKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 322
            +IACL  + K    TH E+DPTNMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHC+ PH+TDNKMY+ILFPQA +V TRRH EFQ+D+YPQGTNAVVAVISYTGFDMEDAMILNK +FERGF HASV+KT+  DL+++      +     +   ++F+N      +G KLYE+LD DGL  +G+ VK GD +YC +D  T KT+TGKHKESE A VETVRAVG  G  K  +++ S TLRFPRNP+IGDKFSSRHGQKGVMSILWP  DMPF+ESG++PD+IINPHAFPSRM
Sbjct:  656 EIACLASEAKGTGATHCEIDPTNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLYPHKTDNKMYRILFPQAPLVMTRRHREFQMDNYPQGTNAVVAVISYTGFDMEDAMILNKSAFERGFAHASVVKTIKIDLKDLL----TKSDSKTMVGKMRFTNTAADG-KGGKLYENLDNDGLPRIGACVKEGDPLYCAIDLRTNKTKTGKHKESEMAYVETVRAVGGAGINKEAMAKASMTLRFPRNPIIGDKFSSRHGQKGVMSILWPQSDMPFTESGMTPDIIINPHAFPSRM 947          
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A7R9U7R0_9STRA (DNA-directed RNA polymerase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7R0_9STRA)

HSP 1 Score: 400 bits (1027), Expect = 3.950e-133
Identity = 203/314 (64.65%), Postives = 233/314 (74.20%), Query Frame = 0
Query:   26 KIACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADL---REMAGGRNRRGGESRVPAHLKFSNQKP--------------GAARGMKLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGAGKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 322
            ++ACL ++V  G TTH+ELDPTNMLSL+ASLTPFSD NQSPRNMYQCQMGKQTMGTPAHCM PHRTDNKMYKI  PQA IVQTRRH E+QLD+YPQGTNAVVAVISYTGFDMEDAMILNK SFERGF HAS+ KT   +L    E A        E      L+F N +P                +   K+YE LD DGL  VG W++  D +YC+++   G++   KHK+ E+ACV+T+R +G +G  K  L RVS TLR PRNP+IGDKFSSRHGQKGVMS+LWP EDMPFSESGISPDVIINPHAFPSRM
Sbjct:   64 EVACLPEEVHEG-TTHQELDPTNMLSLIASLTPFSDQNQSPRNMYQCQMGKQTMGTPAHCM-PHRTDNKMYKIQTPQAPIVQTRRHAEYQLDEYPQGTNAVVAVISYTGFDMEDAMILNKASFERGFAHASIYKTKIINLDDEEEKAASL-----EDGTKPTLRFGNTRPTNFATEVSPSVAIADVSPVRKIYEELDFDGLPHVGQWLEQDDPLYCLLNTTNGESHVTKHKDVERACVQTIRLLGSDGKNKDKLRRVSVTLRIPRNPIIGDKFSSRHGQKGVMSVLWPQEDMPFSESGISPDVIINPHAFPSRM 370          
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A7S3UTQ0_HETAK (DNA-directed RNA polymerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTQ0_HETAK)

HSP 1 Score: 388 bits (996), Expect = 1.040e-129
Identity = 190/285 (66.67%), Postives = 229/285 (80.35%), Query Frame = 0
Query:   40 THRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGGESRVPAHLKFSNQKPGAARG-MKLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGA-GKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 322
            TH+ELDPTNMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTPAH + PHRTDNK+Y+IL PQA IVQT RH  +Q+D+YPQGTNAVVAVISYTG+DMEDAMILN+ +F+RGF HA+V KT T DL    GG  +RG       H++F+N+ PG   G  K+  SL  DGL  VG+WVKPGD + C +D+++G+    KHK++E A V+ VR +G EG   +  L+RVS TLR+PRNP+IGDKFSSRHGQKGV+SILWP E+MPF+ESG++PDVIINPHAFPSRM
Sbjct:    1 THQELDPTNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHSILPHRTDNKLYRILTPQAPIVQTARHSAYQMDEYPQGTNAVVAVISYTGYDMEDAMILNRAAFDRGFAHAAVYKTKTYDLLAERGGSAKRG-------HVRFANRAPGDKEGGAKIEPSLGEDGLPHVGAWVKPGDPLLCHVDDLSGEKTVVKHKDTETAVVQDVRLLGAEGGLPQADLTRVSLTLRYPRNPIIGDKFSSRHGQKGVLSILWPQENMPFTESGMTPDVIINPHAFPSRM 278          
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A7S3V7B4_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7B4_9STRA)

HSP 1 Score: 404 bits (1039), Expect = 2.810e-128
Identity = 204/312 (65.38%), Postives = 244/312 (78.21%), Query Frame = 0
Query:   27 IACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMA--GGRNRRGGESRVPAHLKFSNQK------PGAARGMK-----LYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGAGKHGLSR---VSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 322
            IACL +DV+ G+TTH+ELDP NMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTP H + PHRTDNK+Y++  PQAAI QT RHG++++D+YP GTNAVVAV+SYTGFDMEDAMILNK ++ERGFGHASV KT+  D+++ A   G + +G + R    +KF N+       P AA G+      LY +L  DGL  VG+WV  GD +YCV+DE+TG+T+ GKHKE EKAC++ VR +G   A K  ++R   VS TLR PRNPVIGDKFSSRHGQKGV+SILWP  DMPFSESGISPDVIINPHAFPSRM
Sbjct:  708 IACLAEDVREGITTHQELDPMNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPCHSL-PHRTDNKLYRLQNPQAAIAQTARHGKYKMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSAYERGFGHASVYKTMKVDIKDEAERAGSDTKGDKPR----MKFGNKTVRRAKDPSAAGGIGTTDEVLYPNLGEDGLPEVGTWVDEGDPIYCVVDELTGRTRPGKHKEKEKACIQQVRLLGQPSASKDKVNRDDIVSITLRIPRNPVIGDKFSSRHGQKGVLSILWPQTDMPFSESGISPDVIINPHAFPSRM 1014          
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A6U3PLE0_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3PLE0_9STRA)

HSP 1 Score: 396 bits (1017), Expect = 8.200e-125
Identity = 205/324 (63.27%), Postives = 238/324 (73.46%), Query Frame = 0
Query:   27 IACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGGE--SRVPAHLKFSNQK-----PGAARGMK----------LYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGV-----------EGAGKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 322
            IACL  D++ G+TTH+ELDPTNMLSL++SLTPFSDYNQSPRNMYQCQMGKQTMGTP H + PHRTDNK+Y++  PQA +VQT RHGE+++D+YP GTNAVVAV+SYTGFDMEDAMILNK SFERGFGHASV KT+  DLRE A    RRG    S   + +KF N+       G+A G            LY ++  DGL  VG+WVK GD +YCV+DE+TG     KHKE E ACV++VR +G            + A      +VS TLR PRNPVIGDKFSSRHGQKGV+SILWP EDMPFSESGISPDVIINPHAFPSRM
Sbjct:  734 IACLPQDIREGITTHQELDPTNMLSLISSLTPFSDYNQSPRNMYQCQMGKQTMGTPVHSL-PHRTDNKLYRLQNPQAPVVQTSRHGEYKMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSFERGFGHASVYKTMQVDLREEA---ERRGSSTASGEKSRVKFGNKTIKKFASGSAAGSSSKGSSITEGFLYPNIGEDGLPEVGTWVKEGDPLYCVIDELTGADFAAKHKEKESACVQSVRLLGEHISHSTTTQRQKMAPSQQDQKVSITLRIPRNPVIGDKFSSRHGQKGVLSILWPQEDMPFSESGISPDVIINPHAFPSRM 1053          
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A7S4JAV2_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAV2_9STRA)

HSP 1 Score: 395 bits (1016), Expect = 1.290e-124
Identity = 206/334 (61.68%), Postives = 237/334 (70.96%), Query Frame = 0
Query:   27 IACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGG--ESRVPAHLKFSN--QKPGAARGMK--------------------LYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGAGKHGLSR--------------VSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 322
            IACL++DV+ G+TTH ELDP NMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTP H + P+R DNK+Y++  PQA +VQT RHG F +D+YP GTNAVVAV+SYTGFDMEDAMILNK S+ERGFGHASV KT+T DLR+ A     +GG  +    A LKFSN  +KP                           L+ +LD DGL   G WV  GDA+YCV+D +TGK   G+HKE EKACV+ VR +G   AG+   S+              +S TLRFPRNPVIGDKFSSRHGQKGVMSILWP  DMPFSESGISPDVIINPHAFPSRM
Sbjct:  730 IACLREDVREGITTHMELDPNNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPVHSL-PYRPDNKLYRLQNPQAPVVQTARHGAFNMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSYERGFGHASVYKTMTVDLRDKAEHMGAKGGGCDGSGEARLKFSNILKKPEXXXXXXXXXXXXXXXXXKVEKNAAPWLHRTLDEDGLPMPGEWVSEGDALYCVVDTLTGKDNVGRHKEKEKACVQCVRKLGSASAGQSMNSKSGGRGSSSAVPDEKISLTLRFPRNPVIGDKFSSRHGQKGVMSILWPQVDMPFSESGISPDVIINPHAFPSRM 1062          
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: W7TET2_9STRA (DNA-directed RNA polymerase subunit beta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TET2_9STRA)

HSP 1 Score: 389 bits (998), Expect = 2.040e-122
Identity = 209/345 (60.58%), Postives = 244/345 (70.72%), Query Frame = 0
Query:    2 APLLLLFPGALRTC------------FLGTCVPCVHKIACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGGESRVPAHLKFSN----------QKPGAARGMKLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGAG--KHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 322
            AP L LF GA R              ++G       ++A L +DV+ G TTH+ELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTP     PHRTDNK+Y+IL PQA IVQTRRH E+ +D++PQGTNAVVAVISYTG+DMEDAMIL+K S++RG   A V KT +  LR     R+ RGG  R    L+FSN          Q PG   G  L+E L+ DGL  VG+WVK GD +Y  +D +TG+ + GKHKESE ACVE VR +G+EG       L  VS TLRFPR P+IGDKFSSRHGQKGV+SILWP EDMPF+ESG+SPD+IINPHAFPSRM
Sbjct:  673 APGLFLFSGAARMVRPVLHLETGCVEYIGPMEQVFMEVALLPEDVRAGETTHQELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPTTSY-PHRTDNKLYRILTPQAPIVQTRRHAEYGMDEFPQGTNAVVAVISYTGYDMEDAMILSKASYDRGMAAADVYKTKSVSLR-----RDMRGGPKRPD--LRFSNLRTPAVVAKRQFPGRV-GDPLFEKLEADGLPVVGTWVKEGDVLYSAVDSLTGEVEVGKHKESEVACVEAVRLLGLEGTSGATEPLDTVSITLRFPRRPIIGDKFSSRHGQKGVLSILWPQEDMPFTESGMSPDIIINPHAFPSRM 1008          
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: B8CA95_THAPS (DNA-directed RNA polymerase subunit beta n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CA95_THAPS)

HSP 1 Score: 381 bits (978), Expect = 1.000e-120
Identity = 197/316 (62.34%), Postives = 226/316 (71.52%), Query Frame = 0
Query:   13 RTCFLGTCVPCVHKIACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGGESRVPAHLKFSNQKPGAARGMKLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGA-----GKHGLS-RVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 322
            RT ++G        IACL +D++ G+TTH+ELDP NMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTP H + P+R DNKMYKI  PQA +VQT  HGE+++D+YP GTNAVVAV+SYTGFDMEDAMILNK S+ERGFGHASV KT+   L              RV    +     P   R   +Y  LD DGL  VG WV+ GDA+YC+ D+   K   GKHKE EKACV+T+R +   G      G  G    +S TLRFPRNPVIGDKFSSRHGQKGV+SILWP  DMPFSESGISPDVIINPHAFPSRM
Sbjct:  536 RTEYIGPMEQPFMDIACLPEDIREGITTHQELDPANMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPCHSL-PYRADNKMYKIQTPQAPLVQTAVHGEYKMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSYERGFGHASVYKTIKIRLCNKT---------KRVKIPPENEGDLP-TFRHDPVYPHLDEDGLPRVGQWVEEGDALYCLADDDGNKGYPGKHKEKEKACVQTIRRLNTGGTSSASRGSKGTDDALSITLRFPRNPVIGDKFSSRHGQKGVLSILWPQTDMPFSESGISPDVIINPHAFPSRM 840          
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A7S2W2W3_9STRA (DNA-directed RNA polymerase subunit beta (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W2W3_9STRA)

HSP 1 Score: 377 bits (967), Expect = 3.670e-119
Identity = 190/311 (61.09%), Postives = 231/311 (74.28%), Query Frame = 0
Query:   27 IACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGGESRVPAHLKFSNQKPGAARGM-------------KLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGA--GKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 322
            IACL++D++ G+TTH+E+DP N+LSLVASLTP+SDYNQSPRNMYQCQM KQTMGTP H  TP+RTDNK YK+  PQA IVQT RHGE+++D+YP GTNAVVAV+SYTGFDMED++I+NK S+ERG+ HASV KTV  DL+E      + G ++     L+F N+   + RG              K + +L  DG   VG+WV  GD +  ++DE TG  +  KHKE EKAC++ VR +G  G+  G  G  +VS TLRFPRNPVIGDKF+SRHGQKGVMSILWP  DMPFSESGISPDVIINPHAFPSRM
Sbjct:  565 IACLEEDIREGITTHQEIDPYNLLSLVASLTPYSDYNQSPRNMYQCQMAKQTMGTPFHS-TPYRTDNKYYKLQNPQAPIVQTSRHGEYKIDNYPNGTNAVVAVLSYTGFDMEDSVIINKSSYERGYKHASVYKTVHVDLKEENKMACKPGSDA---PKLRFGNKSRKSKRGPEPDSDDETESDDGKFFSNLGFDGFPEVGTWVNEGDKICSMVDENTGNVEGVKHKEKEKACIQAVRLLGQPGSKSGSEGNEKVSLTLRFPRNPVIGDKFASRHGQKGVMSILWPQVDMPFSESGISPDVIINPHAFPSRM 871          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1XVH2_9STRA1.010e-13368.64DNA-directed RNA polymerase (Fragment) n=1 Tax=Pha... [more]
A0A835YVF9_9STRA1.090e-13368.01DNA-directed RNA polymerase subunit beta n=1 Tax=T... [more]
A0A7R9U7R0_9STRA3.950e-13364.65DNA-directed RNA polymerase n=1 Tax=Pinguiococcus ... [more]
A0A7S3UTQ0_HETAK1.040e-12966.67DNA-directed RNA polymerase n=1 Tax=Heterosigma ak... [more]
A0A7S3V7B4_9STRA2.810e-12865.38DNA-directed RNA polymerase subunit beta n=1 Tax=C... [more]
A0A6U3PLE0_9STRA8.200e-12563.27DNA-directed RNA polymerase subunit beta n=1 Tax=D... [more]
A0A7S4JAV2_9STRA1.290e-12461.68DNA-directed RNA polymerase subunit beta n=1 Tax=O... [more]
W7TET2_9STRA2.040e-12260.58DNA-directed RNA polymerase subunit beta n=2 Tax=M... [more]
B8CA95_THAPS1.000e-12062.34DNA-directed RNA polymerase subunit beta n=1 Tax=T... [more]
A0A7S2W2W3_9STRA3.670e-11961.09DNA-directed RNA polymerase subunit beta (Fragment... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037033DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyGENE3D2.40.270.10coord: 52..166
e-value: 1.1E-37
score: 131.6
IPR037033DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyGENE3D2.40.270.10coord: 234..322
e-value: 7.1E-26
score: 93.2
IPR007120DNA-directed RNA polymerase, subunit 2, hybrid-binding domainPFAMPF00562RNA_pol_Rpb2_6coord: 53..322
e-value: 3.2E-66
score: 224.0
IPR015712DNA-directed RNA polymerase, subunit 2PANTHERPTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2coord: 34..322
NoneNo IPR availablePANTHERPTHR20856:SF5DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA2coord: 34..322
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 34..322
IPR007121RNA polymerase, beta subunit, conserved sitePROSITEPS01166RNA_POL_BETAcoord: 278..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10054contigD-mesarthrocarpus_Contig10054:909..4505 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10054.1.1mRNA_D-mesarthrocarpus_Contig10054.1.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10054 909..4505 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10054.1.1 ID=prot_D-mesarthrocarpus_Contig10054.1.1|Name=mRNA_D-mesarthrocarpus_Contig10054.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=322bp
CAPLLLLFPGALRTCFLGTCVPCVHKIACLKDDVKRGLTTHRELDPTNML
SLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILF
PQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFER
GFGHASVLKTVTADLREMAGGRNRRGGESRVPAHLKFSNQKPGAARGMKL
YESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVR
AVGVEGAGKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDM
PFSESGISPDVIINPHAFPSRM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037033DNA-dir_RNAP_su2_hyb_sf
IPR007120DNA-dir_RNAP_su2_dom
IPR015712DNA-dir_RNA_pol_su2
IPR007121RNA_pol_bsu_CS