mRNA_D-mesarthrocarpus_Contig10054.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A7S1XVH2_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVH2_9STRA) HSP 1 Score: 391 bits (1005), Expect = 1.010e-133 Identity = 197/287 (68.64%), Postives = 228/287 (79.44%), Query Frame = 1 Query: 130 LDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLR--EMAGGRNRRGGESRVP-AHLKFSNQKPG---AARGMKLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGV--EGAGKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966 +DPTNMLSL+ASLTPFSD NQSPRNMYQCQMGKQTMGTPAH M PHRTDNKMYKI PQA IVQT+RH E+QLD+YPQGTNAVVAVISYTGFDMEDAMILNKGS+ERGFGHASV K +L E G +NR GG + +L+ + +PG K+Y++LD DGL VG+WV+ GD +YC +D V+G+ GKHKE+E+AC++ VR +G + +G RVS TLRFPRNP+IGDKFSSRHGQKGVMSILWP EDMPFSESGI+PDVIINPHAFPSRM Sbjct: 1 MDPTNMLSLIASLTPFSDQNQSPRNMYQCQMGKQTMGTPAHSM-PHRTDNKMYKIQTPQAPIVQTKRHAEYQLDEYPQGTNAVVAVISYTGFDMEDAMILNKGSYERGFGHASVYKAKIVNLEDEEKKGSQNRDGGRPSLRFGNLRRTPAEPGNPLIGGEQKIYDNLDADGLPAVGTWVQEGDPLYCTIDSVSGEAHAGKHKETERACIQDVRLLGPADQRSGNEECRRVSMTLRFPRNPIIGDKFSSRHGQKGVMSILWPQEDMPFSESGITPDVIINPHAFPSRM 286
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A835YVF9_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF9_9STRA) HSP 1 Score: 417 bits (1072), Expect = 1.090e-133 Identity = 202/297 (68.01%), Postives = 238/297 (80.13%), Query Frame = 1 Query: 76 KIACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGGESRVPAHLKFSNQKPGAARGMKLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGAGKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966 +IACL + K TH E+DPTNMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHC+ PH+TDNKMY+ILFPQA +V TRRH EFQ+D+YPQGTNAVVAVISYTGFDMEDAMILNK +FERGF HASV+KT+ DL+++ + + ++F+N +G KLYE+LD DGL +G+ VK GD +YC +D T KT+TGKHKESE A VETVRAVG G K +++ S TLRFPRNP+IGDKFSSRHGQKGVMSILWP DMPF+ESG++PD+IINPHAFPSRM Sbjct: 656 EIACLASEAKGTGATHCEIDPTNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLYPHKTDNKMYRILFPQAPLVMTRRHREFQMDNYPQGTNAVVAVISYTGFDMEDAMILNKSAFERGFAHASVVKTIKIDLKDLL----TKSDSKTMVGKMRFTNTAADG-KGGKLYENLDNDGLPRIGACVKEGDPLYCAIDLRTNKTKTGKHKESEMAYVETVRAVGGAGINKEAMAKASMTLRFPRNPIIGDKFSSRHGQKGVMSILWPQSDMPFTESGMTPDIIINPHAFPSRM 947
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A7R9U7R0_9STRA (DNA-directed RNA polymerase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7R0_9STRA) HSP 1 Score: 400 bits (1027), Expect = 3.950e-133 Identity = 203/314 (64.65%), Postives = 233/314 (74.20%), Query Frame = 1 Query: 76 KIACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADL---REMAGGRNRRGGESRVPAHLKFSNQKP--------------GAARGMKLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGAGKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966 ++ACL ++V G TTH+ELDPTNMLSL+ASLTPFSD NQSPRNMYQCQMGKQTMGTPAHCM PHRTDNKMYKI PQA IVQTRRH E+QLD+YPQGTNAVVAVISYTGFDMEDAMILNK SFERGF HAS+ KT +L E A E L+F N +P + K+YE LD DGL VG W++ D +YC+++ G++ KHK+ E+ACV+T+R +G +G K L RVS TLR PRNP+IGDKFSSRHGQKGVMS+LWP EDMPFSESGISPDVIINPHAFPSRM Sbjct: 64 EVACLPEEVHEG-TTHQELDPTNMLSLIASLTPFSDQNQSPRNMYQCQMGKQTMGTPAHCM-PHRTDNKMYKIQTPQAPIVQTRRHAEYQLDEYPQGTNAVVAVISYTGFDMEDAMILNKASFERGFAHASIYKTKIINLDDEEEKAASL-----EDGTKPTLRFGNTRPTNFATEVSPSVAIADVSPVRKIYEELDFDGLPHVGQWLEQDDPLYCLLNTTNGESHVTKHKDVERACVQTIRLLGSDGKNKDKLRRVSVTLRIPRNPIIGDKFSSRHGQKGVMSVLWPQEDMPFSESGISPDVIINPHAFPSRM 370
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A7S3UTQ0_HETAK (DNA-directed RNA polymerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTQ0_HETAK) HSP 1 Score: 388 bits (996), Expect = 1.040e-129 Identity = 190/285 (66.67%), Postives = 229/285 (80.35%), Query Frame = 1 Query: 118 THRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGGESRVPAHLKFSNQKPGAARG-MKLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGA-GKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966 TH+ELDPTNMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTPAH + PHRTDNK+Y+IL PQA IVQT RH +Q+D+YPQGTNAVVAVISYTG+DMEDAMILN+ +F+RGF HA+V KT T DL GG +RG H++F+N+ PG G K+ SL DGL VG+WVKPGD + C +D+++G+ KHK++E A V+ VR +G EG + L+RVS TLR+PRNP+IGDKFSSRHGQKGV+SILWP E+MPF+ESG++PDVIINPHAFPSRM Sbjct: 1 THQELDPTNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHSILPHRTDNKLYRILTPQAPIVQTARHSAYQMDEYPQGTNAVVAVISYTGYDMEDAMILNRAAFDRGFAHAAVYKTKTYDLLAERGGSAKRG-------HVRFANRAPGDKEGGAKIEPSLGEDGLPHVGAWVKPGDPLLCHVDDLSGEKTVVKHKDTETAVVQDVRLLGAEGGLPQADLTRVSLTLRYPRNPIIGDKFSSRHGQKGVLSILWPQENMPFTESGMTPDVIINPHAFPSRM 278
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A7S3V7B4_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7B4_9STRA) HSP 1 Score: 404 bits (1039), Expect = 2.810e-128 Identity = 204/312 (65.38%), Postives = 244/312 (78.21%), Query Frame = 1 Query: 79 IACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMA--GGRNRRGGESRVPAHLKFSNQK------PGAARGMK-----LYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGAGKHGLSR---VSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966 IACL +DV+ G+TTH+ELDP NMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTP H + PHRTDNK+Y++ PQAAI QT RHG++++D+YP GTNAVVAV+SYTGFDMEDAMILNK ++ERGFGHASV KT+ D+++ A G + +G + R +KF N+ P AA G+ LY +L DGL VG+WV GD +YCV+DE+TG+T+ GKHKE EKAC++ VR +G A K ++R VS TLR PRNPVIGDKFSSRHGQKGV+SILWP DMPFSESGISPDVIINPHAFPSRM Sbjct: 708 IACLAEDVREGITTHQELDPMNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPCHSL-PHRTDNKLYRLQNPQAAIAQTARHGKYKMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSAYERGFGHASVYKTMKVDIKDEAERAGSDTKGDKPR----MKFGNKTVRRAKDPSAAGGIGTTDEVLYPNLGEDGLPEVGTWVDEGDPIYCVVDELTGRTRPGKHKEKEKACIQQVRLLGQPSASKDKVNRDDIVSITLRIPRNPVIGDKFSSRHGQKGVLSILWPQTDMPFSESGISPDVIINPHAFPSRM 1014
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A6U3PLE0_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3PLE0_9STRA) HSP 1 Score: 396 bits (1017), Expect = 8.200e-125 Identity = 205/324 (63.27%), Postives = 238/324 (73.46%), Query Frame = 1 Query: 79 IACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGGE--SRVPAHLKFSNQK-----PGAARGMK----------LYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGV-----------EGAGKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966 IACL D++ G+TTH+ELDPTNMLSL++SLTPFSDYNQSPRNMYQCQMGKQTMGTP H + PHRTDNK+Y++ PQA +VQT RHGE+++D+YP GTNAVVAV+SYTGFDMEDAMILNK SFERGFGHASV KT+ DLRE A RRG S + +KF N+ G+A G LY ++ DGL VG+WVK GD +YCV+DE+TG KHKE E ACV++VR +G + A +VS TLR PRNPVIGDKFSSRHGQKGV+SILWP EDMPFSESGISPDVIINPHAFPSRM Sbjct: 734 IACLPQDIREGITTHQELDPTNMLSLISSLTPFSDYNQSPRNMYQCQMGKQTMGTPVHSL-PHRTDNKLYRLQNPQAPVVQTSRHGEYKMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSFERGFGHASVYKTMQVDLREEA---ERRGSSTASGEKSRVKFGNKTIKKFASGSAAGSSSKGSSITEGFLYPNIGEDGLPEVGTWVKEGDPLYCVIDELTGADFAAKHKEKESACVQSVRLLGEHISHSTTTQRQKMAPSQQDQKVSITLRIPRNPVIGDKFSSRHGQKGVLSILWPQEDMPFSESGISPDVIINPHAFPSRM 1053
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A7S4JAV2_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAV2_9STRA) HSP 1 Score: 395 bits (1016), Expect = 1.290e-124 Identity = 206/334 (61.68%), Postives = 237/334 (70.96%), Query Frame = 1 Query: 79 IACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGG--ESRVPAHLKFSN--QKPGAARGMK--------------------LYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGAGKHGLSR--------------VSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966 IACL++DV+ G+TTH ELDP NMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTP H + P+R DNK+Y++ PQA +VQT RHG F +D+YP GTNAVVAV+SYTGFDMEDAMILNK S+ERGFGHASV KT+T DLR+ A +GG + A LKFSN +KP L+ +LD DGL G WV GDA+YCV+D +TGK G+HKE EKACV+ VR +G AG+ S+ +S TLRFPRNPVIGDKFSSRHGQKGVMSILWP DMPFSESGISPDVIINPHAFPSRM Sbjct: 730 IACLREDVREGITTHMELDPNNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPVHSL-PYRPDNKLYRLQNPQAPVVQTARHGAFNMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSYERGFGHASVYKTMTVDLRDKAEHMGAKGGGCDGSGEARLKFSNILKKPEXXXXXXXXXXXXXXXXXKVEKNAAPWLHRTLDEDGLPMPGEWVSEGDALYCVVDTLTGKDNVGRHKEKEKACVQCVRKLGSASAGQSMNSKSGGRGSSSAVPDEKISLTLRFPRNPVIGDKFSSRHGQKGVMSILWPQVDMPFSESGISPDVIINPHAFPSRM 1062
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: W7TET2_9STRA (DNA-directed RNA polymerase subunit beta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TET2_9STRA) HSP 1 Score: 389 bits (998), Expect = 2.040e-122 Identity = 209/345 (60.58%), Postives = 244/345 (70.72%), Query Frame = 1 Query: 4 APLLLLFPGALRTC------------FLGTCVPCVHKIACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGGESRVPAHLKFSN----------QKPGAARGMKLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGAG--KHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966 AP L LF GA R ++G ++A L +DV+ G TTH+ELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTP PHRTDNK+Y+IL PQA IVQTRRH E+ +D++PQGTNAVVAVISYTG+DMEDAMIL+K S++RG A V KT + LR R+ RGG R L+FSN Q PG G L+E L+ DGL VG+WVK GD +Y +D +TG+ + GKHKESE ACVE VR +G+EG L VS TLRFPR P+IGDKFSSRHGQKGV+SILWP EDMPF+ESG+SPD+IINPHAFPSRM Sbjct: 673 APGLFLFSGAARMVRPVLHLETGCVEYIGPMEQVFMEVALLPEDVRAGETTHQELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPTTSY-PHRTDNKLYRILTPQAPIVQTRRHAEYGMDEFPQGTNAVVAVISYTGYDMEDAMILSKASYDRGMAAADVYKTKSVSLR-----RDMRGGPKRPD--LRFSNLRTPAVVAKRQFPGRV-GDPLFEKLEADGLPVVGTWVKEGDVLYSAVDSLTGEVEVGKHKESEVACVEAVRLLGLEGTSGATEPLDTVSITLRFPRRPIIGDKFSSRHGQKGVLSILWPQEDMPFTESGMSPDIIINPHAFPSRM 1008
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: B8CA95_THAPS (DNA-directed RNA polymerase subunit beta n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CA95_THAPS) HSP 1 Score: 381 bits (978), Expect = 1.000e-120 Identity = 197/316 (62.34%), Postives = 226/316 (71.52%), Query Frame = 1 Query: 37 RTCFLGTCVPCVHKIACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGGESRVPAHLKFSNQKPGAARGMKLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGA-----GKHGLS-RVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966 RT ++G IACL +D++ G+TTH+ELDP NMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTP H + P+R DNKMYKI PQA +VQT HGE+++D+YP GTNAVVAV+SYTGFDMEDAMILNK S+ERGFGHASV KT+ L RV + P R +Y LD DGL VG WV+ GDA+YC+ D+ K GKHKE EKACV+T+R + G G G +S TLRFPRNPVIGDKFSSRHGQKGV+SILWP DMPFSESGISPDVIINPHAFPSRM Sbjct: 536 RTEYIGPMEQPFMDIACLPEDIREGITTHQELDPANMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPCHSL-PYRADNKMYKIQTPQAPLVQTAVHGEYKMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSYERGFGHASVYKTIKIRLCNKT---------KRVKIPPENEGDLP-TFRHDPVYPHLDEDGLPRVGQWVEEGDALYCLADDDGNKGYPGKHKEKEKACVQTIRRLNTGGTSSASRGSKGTDDALSITLRFPRNPVIGDKFSSRHGQKGVLSILWPQTDMPFSESGISPDVIINPHAFPSRM 840
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A7S2W2W3_9STRA (DNA-directed RNA polymerase subunit beta (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W2W3_9STRA) HSP 1 Score: 377 bits (967), Expect = 3.670e-119 Identity = 190/311 (61.09%), Postives = 231/311 (74.28%), Query Frame = 1 Query: 79 IACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGGESRVPAHLKFSNQKPGAARGM-------------KLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGA--GKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966 IACL++D++ G+TTH+E+DP N+LSLVASLTP+SDYNQSPRNMYQCQM KQTMGTP H TP+RTDNK YK+ PQA IVQT RHGE+++D+YP GTNAVVAV+SYTGFDMED++I+NK S+ERG+ HASV KTV DL+E + G ++ L+F N+ + RG K + +L DG VG+WV GD + ++DE TG + KHKE EKAC++ VR +G G+ G G +VS TLRFPRNPVIGDKF+SRHGQKGVMSILWP DMPFSESGISPDVIINPHAFPSRM Sbjct: 565 IACLEEDIREGITTHQEIDPYNLLSLVASLTPYSDYNQSPRNMYQCQMAKQTMGTPFHS-TPYRTDNKYYKLQNPQAPIVQTSRHGEYKIDNYPNGTNAVVAVLSYTGFDMEDSVIINKSSYERGYKHASVYKTVHVDLKEENKMACKPGSDA---PKLRFGNKSRKSKRGPEPDSDDETESDDGKFFSNLGFDGFPEVGTWVNEGDKICSMVDENTGNVEGVKHKEKEKACIQAVRLLGQPGSKSGSEGNEKVSLTLRFPRNPVIGDKFASRHGQKGVMSILWPQVDMPFSESGISPDVIINPHAFPSRM 871 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10054.1.1 >prot_D-mesarthrocarpus_Contig10054.1.1 ID=prot_D-mesarthrocarpus_Contig10054.1.1|Name=mRNA_D-mesarthrocarpus_Contig10054.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=322bp CAPLLLLFPGALRTCFLGTCVPCVHKIACLKDDVKRGLTTHRELDPTNMLback to top mRNA from alignment at D-mesarthrocarpus_Contig10054:909..4505+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10054.1.1 ID=mRNA_D-mesarthrocarpus_Contig10054.1.1|Name=mRNA_D-mesarthrocarpus_Contig10054.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3597bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10054:909..4505+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10054:909..4505+ >mRNA_D-mesarthrocarpus_Contig10054.1.1 ID=mRNA_D-mesarthrocarpus_Contig10054.1.1|Name=mRNA_D-mesarthrocarpus_Contig10054.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=966bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10054:909..4505+ (Discosporangium mesarthrocarpum MT17_79)back to top |