mRNA_D-mesarthrocarpus_Contig10054.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10054.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10054.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A7S1XVH2_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVH2_9STRA)

HSP 1 Score: 391 bits (1005), Expect = 1.010e-133
Identity = 197/287 (68.64%), Postives = 228/287 (79.44%), Query Frame = 1
Query:  130 LDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLR--EMAGGRNRRGGESRVP-AHLKFSNQKPG---AARGMKLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGV--EGAGKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966
            +DPTNMLSL+ASLTPFSD NQSPRNMYQCQMGKQTMGTPAH M PHRTDNKMYKI  PQA IVQT+RH E+QLD+YPQGTNAVVAVISYTGFDMEDAMILNKGS+ERGFGHASV K    +L   E  G +NR GG   +   +L+ +  +PG        K+Y++LD DGL  VG+WV+ GD +YC +D V+G+   GKHKE+E+AC++ VR +G   + +G     RVS TLRFPRNP+IGDKFSSRHGQKGVMSILWP EDMPFSESGI+PDVIINPHAFPSRM
Sbjct:    1 MDPTNMLSLIASLTPFSDQNQSPRNMYQCQMGKQTMGTPAHSM-PHRTDNKMYKIQTPQAPIVQTKRHAEYQLDEYPQGTNAVVAVISYTGFDMEDAMILNKGSYERGFGHASVYKAKIVNLEDEEKKGSQNRDGGRPSLRFGNLRRTPAEPGNPLIGGEQKIYDNLDADGLPAVGTWVQEGDPLYCTIDSVSGEAHAGKHKETERACIQDVRLLGPADQRSGNEECRRVSMTLRFPRNPIIGDKFSSRHGQKGVMSILWPQEDMPFSESGITPDVIINPHAFPSRM 286          
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A835YVF9_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF9_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 1.090e-133
Identity = 202/297 (68.01%), Postives = 238/297 (80.13%), Query Frame = 1
Query:   76 KIACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGGESRVPAHLKFSNQKPGAARGMKLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGAGKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966
            +IACL  + K    TH E+DPTNMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHC+ PH+TDNKMY+ILFPQA +V TRRH EFQ+D+YPQGTNAVVAVISYTGFDMEDAMILNK +FERGF HASV+KT+  DL+++      +     +   ++F+N      +G KLYE+LD DGL  +G+ VK GD +YC +D  T KT+TGKHKESE A VETVRAVG  G  K  +++ S TLRFPRNP+IGDKFSSRHGQKGVMSILWP  DMPF+ESG++PD+IINPHAFPSRM
Sbjct:  656 EIACLASEAKGTGATHCEIDPTNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLYPHKTDNKMYRILFPQAPLVMTRRHREFQMDNYPQGTNAVVAVISYTGFDMEDAMILNKSAFERGFAHASVVKTIKIDLKDLL----TKSDSKTMVGKMRFTNTAADG-KGGKLYENLDNDGLPRIGACVKEGDPLYCAIDLRTNKTKTGKHKESEMAYVETVRAVGGAGINKEAMAKASMTLRFPRNPIIGDKFSSRHGQKGVMSILWPQSDMPFTESGMTPDIIINPHAFPSRM 947          
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A7R9U7R0_9STRA (DNA-directed RNA polymerase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7R0_9STRA)

HSP 1 Score: 400 bits (1027), Expect = 3.950e-133
Identity = 203/314 (64.65%), Postives = 233/314 (74.20%), Query Frame = 1
Query:   76 KIACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADL---REMAGGRNRRGGESRVPAHLKFSNQKP--------------GAARGMKLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGAGKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966
            ++ACL ++V  G TTH+ELDPTNMLSL+ASLTPFSD NQSPRNMYQCQMGKQTMGTPAHCM PHRTDNKMYKI  PQA IVQTRRH E+QLD+YPQGTNAVVAVISYTGFDMEDAMILNK SFERGF HAS+ KT   +L    E A        E      L+F N +P                +   K+YE LD DGL  VG W++  D +YC+++   G++   KHK+ E+ACV+T+R +G +G  K  L RVS TLR PRNP+IGDKFSSRHGQKGVMS+LWP EDMPFSESGISPDVIINPHAFPSRM
Sbjct:   64 EVACLPEEVHEG-TTHQELDPTNMLSLIASLTPFSDQNQSPRNMYQCQMGKQTMGTPAHCM-PHRTDNKMYKIQTPQAPIVQTRRHAEYQLDEYPQGTNAVVAVISYTGFDMEDAMILNKASFERGFAHASIYKTKIINLDDEEEKAASL-----EDGTKPTLRFGNTRPTNFATEVSPSVAIADVSPVRKIYEELDFDGLPHVGQWLEQDDPLYCLLNTTNGESHVTKHKDVERACVQTIRLLGSDGKNKDKLRRVSVTLRIPRNPIIGDKFSSRHGQKGVMSVLWPQEDMPFSESGISPDVIINPHAFPSRM 370          
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A7S3UTQ0_HETAK (DNA-directed RNA polymerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTQ0_HETAK)

HSP 1 Score: 388 bits (996), Expect = 1.040e-129
Identity = 190/285 (66.67%), Postives = 229/285 (80.35%), Query Frame = 1
Query:  118 THRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGGESRVPAHLKFSNQKPGAARG-MKLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGA-GKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966
            TH+ELDPTNMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTPAH + PHRTDNK+Y+IL PQA IVQT RH  +Q+D+YPQGTNAVVAVISYTG+DMEDAMILN+ +F+RGF HA+V KT T DL    GG  +RG       H++F+N+ PG   G  K+  SL  DGL  VG+WVKPGD + C +D+++G+    KHK++E A V+ VR +G EG   +  L+RVS TLR+PRNP+IGDKFSSRHGQKGV+SILWP E+MPF+ESG++PDVIINPHAFPSRM
Sbjct:    1 THQELDPTNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHSILPHRTDNKLYRILTPQAPIVQTARHSAYQMDEYPQGTNAVVAVISYTGYDMEDAMILNRAAFDRGFAHAAVYKTKTYDLLAERGGSAKRG-------HVRFANRAPGDKEGGAKIEPSLGEDGLPHVGAWVKPGDPLLCHVDDLSGEKTVVKHKDTETAVVQDVRLLGAEGGLPQADLTRVSLTLRYPRNPIIGDKFSSRHGQKGVLSILWPQENMPFTESGMTPDVIINPHAFPSRM 278          
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A7S3V7B4_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7B4_9STRA)

HSP 1 Score: 404 bits (1039), Expect = 2.810e-128
Identity = 204/312 (65.38%), Postives = 244/312 (78.21%), Query Frame = 1
Query:   79 IACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMA--GGRNRRGGESRVPAHLKFSNQK------PGAARGMK-----LYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGAGKHGLSR---VSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966
            IACL +DV+ G+TTH+ELDP NMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTP H + PHRTDNK+Y++  PQAAI QT RHG++++D+YP GTNAVVAV+SYTGFDMEDAMILNK ++ERGFGHASV KT+  D+++ A   G + +G + R    +KF N+       P AA G+      LY +L  DGL  VG+WV  GD +YCV+DE+TG+T+ GKHKE EKAC++ VR +G   A K  ++R   VS TLR PRNPVIGDKFSSRHGQKGV+SILWP  DMPFSESGISPDVIINPHAFPSRM
Sbjct:  708 IACLAEDVREGITTHQELDPMNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPCHSL-PHRTDNKLYRLQNPQAAIAQTARHGKYKMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSAYERGFGHASVYKTMKVDIKDEAERAGSDTKGDKPR----MKFGNKTVRRAKDPSAAGGIGTTDEVLYPNLGEDGLPEVGTWVDEGDPIYCVVDELTGRTRPGKHKEKEKACIQQVRLLGQPSASKDKVNRDDIVSITLRIPRNPVIGDKFSSRHGQKGVLSILWPQTDMPFSESGISPDVIINPHAFPSRM 1014          
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A6U3PLE0_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3PLE0_9STRA)

HSP 1 Score: 396 bits (1017), Expect = 8.200e-125
Identity = 205/324 (63.27%), Postives = 238/324 (73.46%), Query Frame = 1
Query:   79 IACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGGE--SRVPAHLKFSNQK-----PGAARGMK----------LYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGV-----------EGAGKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966
            IACL  D++ G+TTH+ELDPTNMLSL++SLTPFSDYNQSPRNMYQCQMGKQTMGTP H + PHRTDNK+Y++  PQA +VQT RHGE+++D+YP GTNAVVAV+SYTGFDMEDAMILNK SFERGFGHASV KT+  DLRE A    RRG    S   + +KF N+       G+A G            LY ++  DGL  VG+WVK GD +YCV+DE+TG     KHKE E ACV++VR +G            + A      +VS TLR PRNPVIGDKFSSRHGQKGV+SILWP EDMPFSESGISPDVIINPHAFPSRM
Sbjct:  734 IACLPQDIREGITTHQELDPTNMLSLISSLTPFSDYNQSPRNMYQCQMGKQTMGTPVHSL-PHRTDNKLYRLQNPQAPVVQTSRHGEYKMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSFERGFGHASVYKTMQVDLREEA---ERRGSSTASGEKSRVKFGNKTIKKFASGSAAGSSSKGSSITEGFLYPNIGEDGLPEVGTWVKEGDPLYCVIDELTGADFAAKHKEKESACVQSVRLLGEHISHSTTTQRQKMAPSQQDQKVSITLRIPRNPVIGDKFSSRHGQKGVLSILWPQEDMPFSESGISPDVIINPHAFPSRM 1053          
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A7S4JAV2_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAV2_9STRA)

HSP 1 Score: 395 bits (1016), Expect = 1.290e-124
Identity = 206/334 (61.68%), Postives = 237/334 (70.96%), Query Frame = 1
Query:   79 IACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGG--ESRVPAHLKFSN--QKPGAARGMK--------------------LYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGAGKHGLSR--------------VSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966
            IACL++DV+ G+TTH ELDP NMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTP H + P+R DNK+Y++  PQA +VQT RHG F +D+YP GTNAVVAV+SYTGFDMEDAMILNK S+ERGFGHASV KT+T DLR+ A     +GG  +    A LKFSN  +KP                           L+ +LD DGL   G WV  GDA+YCV+D +TGK   G+HKE EKACV+ VR +G   AG+   S+              +S TLRFPRNPVIGDKFSSRHGQKGVMSILWP  DMPFSESGISPDVIINPHAFPSRM
Sbjct:  730 IACLREDVREGITTHMELDPNNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPVHSL-PYRPDNKLYRLQNPQAPVVQTARHGAFNMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSYERGFGHASVYKTMTVDLRDKAEHMGAKGGGCDGSGEARLKFSNILKKPEXXXXXXXXXXXXXXXXXKVEKNAAPWLHRTLDEDGLPMPGEWVSEGDALYCVVDTLTGKDNVGRHKEKEKACVQCVRKLGSASAGQSMNSKSGGRGSSSAVPDEKISLTLRFPRNPVIGDKFSSRHGQKGVMSILWPQVDMPFSESGISPDVIINPHAFPSRM 1062          
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: W7TET2_9STRA (DNA-directed RNA polymerase subunit beta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TET2_9STRA)

HSP 1 Score: 389 bits (998), Expect = 2.040e-122
Identity = 209/345 (60.58%), Postives = 244/345 (70.72%), Query Frame = 1
Query:    4 APLLLLFPGALRTC------------FLGTCVPCVHKIACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGGESRVPAHLKFSN----------QKPGAARGMKLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGAG--KHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966
            AP L LF GA R              ++G       ++A L +DV+ G TTH+ELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTP     PHRTDNK+Y+IL PQA IVQTRRH E+ +D++PQGTNAVVAVISYTG+DMEDAMIL+K S++RG   A V KT +  LR     R+ RGG  R    L+FSN          Q PG   G  L+E L+ DGL  VG+WVK GD +Y  +D +TG+ + GKHKESE ACVE VR +G+EG       L  VS TLRFPR P+IGDKFSSRHGQKGV+SILWP EDMPF+ESG+SPD+IINPHAFPSRM
Sbjct:  673 APGLFLFSGAARMVRPVLHLETGCVEYIGPMEQVFMEVALLPEDVRAGETTHQELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPTTSY-PHRTDNKLYRILTPQAPIVQTRRHAEYGMDEFPQGTNAVVAVISYTGYDMEDAMILSKASYDRGMAAADVYKTKSVSLR-----RDMRGGPKRPD--LRFSNLRTPAVVAKRQFPGRV-GDPLFEKLEADGLPVVGTWVKEGDVLYSAVDSLTGEVEVGKHKESEVACVEAVRLLGLEGTSGATEPLDTVSITLRFPRRPIIGDKFSSRHGQKGVLSILWPQEDMPFTESGMSPDIIINPHAFPSRM 1008          
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: B8CA95_THAPS (DNA-directed RNA polymerase subunit beta n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CA95_THAPS)

HSP 1 Score: 381 bits (978), Expect = 1.000e-120
Identity = 197/316 (62.34%), Postives = 226/316 (71.52%), Query Frame = 1
Query:   37 RTCFLGTCVPCVHKIACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGGESRVPAHLKFSNQKPGAARGMKLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGA-----GKHGLS-RVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966
            RT ++G        IACL +D++ G+TTH+ELDP NMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTP H + P+R DNKMYKI  PQA +VQT  HGE+++D+YP GTNAVVAV+SYTGFDMEDAMILNK S+ERGFGHASV KT+   L              RV    +     P   R   +Y  LD DGL  VG WV+ GDA+YC+ D+   K   GKHKE EKACV+T+R +   G      G  G    +S TLRFPRNPVIGDKFSSRHGQKGV+SILWP  DMPFSESGISPDVIINPHAFPSRM
Sbjct:  536 RTEYIGPMEQPFMDIACLPEDIREGITTHQELDPANMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPCHSL-PYRADNKMYKIQTPQAPLVQTAVHGEYKMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSYERGFGHASVYKTIKIRLCNKT---------KRVKIPPENEGDLP-TFRHDPVYPHLDEDGLPRVGQWVEEGDALYCLADDDGNKGYPGKHKEKEKACVQTIRRLNTGGTSSASRGSKGTDDALSITLRFPRNPVIGDKFSSRHGQKGVLSILWPQTDMPFSESGISPDVIINPHAFPSRM 840          
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Match: A0A7S2W2W3_9STRA (DNA-directed RNA polymerase subunit beta (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W2W3_9STRA)

HSP 1 Score: 377 bits (967), Expect = 3.670e-119
Identity = 190/311 (61.09%), Postives = 231/311 (74.28%), Query Frame = 1
Query:   79 IACLKDDVKRGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILFPQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFERGFGHASVLKTVTADLREMAGGRNRRGGESRVPAHLKFSNQKPGAARGM-------------KLYESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVRAVGVEGA--GKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDMPFSESGISPDVIINPHAFPSRM 966
            IACL++D++ G+TTH+E+DP N+LSLVASLTP+SDYNQSPRNMYQCQM KQTMGTP H  TP+RTDNK YK+  PQA IVQT RHGE+++D+YP GTNAVVAV+SYTGFDMED++I+NK S+ERG+ HASV KTV  DL+E      + G ++     L+F N+   + RG              K + +L  DG   VG+WV  GD +  ++DE TG  +  KHKE EKAC++ VR +G  G+  G  G  +VS TLRFPRNPVIGDKF+SRHGQKGVMSILWP  DMPFSESGISPDVIINPHAFPSRM
Sbjct:  565 IACLEEDIREGITTHQEIDPYNLLSLVASLTPYSDYNQSPRNMYQCQMAKQTMGTPFHS-TPYRTDNKYYKLQNPQAPIVQTSRHGEYKIDNYPNGTNAVVAVLSYTGFDMEDSVIINKSSYERGYKHASVYKTVHVDLKEENKMACKPGSDA---PKLRFGNKSRKSKRGPEPDSDDETESDDGKFFSNLGFDGFPEVGTWVNEGDKICSMVDENTGNVEGVKHKEKEKACIQAVRLLGQPGSKSGSEGNEKVSLTLRFPRNPVIGDKFASRHGQKGVMSILWPQVDMPFSESGISPDVIINPHAFPSRM 871          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10054.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1XVH2_9STRA1.010e-13368.64DNA-directed RNA polymerase (Fragment) n=1 Tax=Pha... [more]
A0A835YVF9_9STRA1.090e-13368.01DNA-directed RNA polymerase subunit beta n=1 Tax=T... [more]
A0A7R9U7R0_9STRA3.950e-13364.65DNA-directed RNA polymerase n=1 Tax=Pinguiococcus ... [more]
A0A7S3UTQ0_HETAK1.040e-12966.67DNA-directed RNA polymerase n=1 Tax=Heterosigma ak... [more]
A0A7S3V7B4_9STRA2.810e-12865.38DNA-directed RNA polymerase subunit beta n=1 Tax=C... [more]
A0A6U3PLE0_9STRA8.200e-12563.27DNA-directed RNA polymerase subunit beta n=1 Tax=D... [more]
A0A7S4JAV2_9STRA1.290e-12461.68DNA-directed RNA polymerase subunit beta n=1 Tax=O... [more]
W7TET2_9STRA2.040e-12260.58DNA-directed RNA polymerase subunit beta n=2 Tax=M... [more]
B8CA95_THAPS1.000e-12062.34DNA-directed RNA polymerase subunit beta n=1 Tax=T... [more]
A0A7S2W2W3_9STRA3.670e-11961.09DNA-directed RNA polymerase subunit beta (Fragment... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10054contigD-mesarthrocarpus_Contig10054:909..4505 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog35128.Thaps36845
PFAMsRNA_pol_Rpa2_4,RNA_pol_Rpb2_1,RNA_pol_Rpb2_2,RNA_pol_Rpb2_3,RNA_pol_Rpb2_6,RNA_pol_Rpb2_7
Model size966
Max annot lvl2836|Bacillariophyta
KEGG rclassRC02795
KEGG koko:K03002
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020
KEGG ModuleM00182
Hectar predicted targeting categorysignal peptide
Exons6
Evalue1.64e-121
EggNOG OGsCOG0085@1|root,KOG0216@2759|Eukaryota,2XAVX@2836|Bacillariophyta
EC2.7.7.6
DescriptionDNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
Cds size966
COG categoryK
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10054.1.1prot_D-mesarthrocarpus_Contig10054.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10054 909..4505 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789151.8982797-CDS-D-mesarthrocarpus_Contig10054:908..11211680789151.8982797-CDS-D-mesarthrocarpus_Contig10054:908..1121Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10054 909..1121 +
1680789151.912832-CDS-D-mesarthrocarpus_Contig10054:1447..15251680789151.912832-CDS-D-mesarthrocarpus_Contig10054:1447..1525Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10054 1448..1525 +
1680789151.9244041-CDS-D-mesarthrocarpus_Contig10054:2128..22001680789151.9244041-CDS-D-mesarthrocarpus_Contig10054:2128..2200Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10054 2129..2200 +
1680789151.939046-CDS-D-mesarthrocarpus_Contig10054:2451..25371680789151.939046-CDS-D-mesarthrocarpus_Contig10054:2451..2537Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10054 2452..2537 +
1680789151.9564874-CDS-D-mesarthrocarpus_Contig10054:3186..34481680789151.9564874-CDS-D-mesarthrocarpus_Contig10054:3186..3448Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10054 3187..3448 +
1680789151.9687243-CDS-D-mesarthrocarpus_Contig10054:4250..45051680789151.9687243-CDS-D-mesarthrocarpus_Contig10054:4250..4505Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10054 4251..4505 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10054.1.1

>prot_D-mesarthrocarpus_Contig10054.1.1 ID=prot_D-mesarthrocarpus_Contig10054.1.1|Name=mRNA_D-mesarthrocarpus_Contig10054.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=322bp
CAPLLLLFPGALRTCFLGTCVPCVHKIACLKDDVKRGLTTHRELDPTNML
SLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCMTPHRTDNKMYKILF
PQAAIVQTRRHGEFQLDDYPQGTNAVVAVISYTGFDMEDAMILNKGSFER
GFGHASVLKTVTADLREMAGGRNRRGGESRVPAHLKFSNQKPGAARGMKL
YESLDLDGLLPVGSWVKPGDAMYCVMDEVTGKTQTGKHKESEKACVETVR
AVGVEGAGKHGLSRVSYTLRFPRNPVIGDKFSSRHGQKGVMSILWPAEDM
PFSESGISPDVIINPHAFPSRM
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mRNA from alignment at D-mesarthrocarpus_Contig10054:909..4505+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10054.1.1 ID=mRNA_D-mesarthrocarpus_Contig10054.1.1|Name=mRNA_D-mesarthrocarpus_Contig10054.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3597bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10054:909..4505+ (Discosporangium mesarthrocarpum MT17_79)
TGTGCACCGCTGCTCCTCTTGTTCCCTGGTGCCCTACGAACATGTTTTTT GGGGACTTGTGTTCCCTGCGTGCACAAGATCGCATGCCTAAAGGATGATG TGAAGAGGGGGCTGACCACACACAGAGAGCTGGACCCCACCAACATGCTG TCGCTGGTGGCATCACTGACACCCTTCTCAGACTACAACCAGAGCCCGAG AAACATGTACCAGGTCAGGGGACAGGAGACAAGGGACAAGGGGGGGGGCG GGGGTGGGGTCATGGGGGGGACCTGGTTGCCCTTGAAGATTGTGGGGCTT GTAACGTGTCCGGTTGTCACACTCGTGCGGGTGGATTGAGAGGAGCCGCT CCTCCTGAAGCACGTCTACAAAGACAGCATGTGTGTTGTTGATAGCAGGA CTTAAAAAAGGTAAAGAGTTAACAGGAGGAGGATTTGCATAAAGATGTCC CCCCCCCTCCTCTCAATCCTTCCTTCCTTCCCCACTGCTTTGTCACAACT CTTCCCGCTATTTGAACGTCGATCATGACCTCATATCAGTGCCAGATGGG AAAGCAGACGATGGGTACCCCTGCACATTGCATGACCCCGCACAGGACGG ACAACAAAATGTACAAGGTGAGGCTGCATTGGAAGCACTCCTTGGGGTAC CTGCGGGGGAATCATTGACGAAATTGCTCTGTTCCTACCCTGTTTTTCGC TCTTCGCTTCAACATTCAAGGGTTCAAAGGCTTTCTGGACAAGTTGGTCT AAGGCTGGTGTTTGAGTGTTGCCTTTTATTTTGTACGGTAGGAGAAGAAT TCACAATCCAGCATGACCCGTCAGGGCTGAACGATTTCCACTGCTTTTGT GTAACTTCATCGCTATTTGCTGCAAGACTTTGGCGCATCCGTCGCAAGGC ATATCATCAGCATGCAGCCTGATATCGCCTCTCACACCGCCTTAAAGTGG CTGGACAAGACGTCCTGAGCCTGGTGGCAGTTCAGACCATCCCCACACCT GAGGTTCTTCCATGGTGGACCATTCCTGGAACTTTCCTGGTGCATCTCAA ACCCTATGGGGGCTGCGGTGCACGGGTTTGCAGTATCACTCACAGATTAA ATCATGAAGGGGACTGCTGCAACCCCGCAGGAATCAACACGATCTCCCCT TGCAAACAGTAGATAAATACGATGTTTTTTTTCTACTCATCGACCTGATG GCCGCGGCCTCCTCCGTCAGATCCTGTTTCCTCAGGCAGCCATCGTCCAA ACACGGCGTCACGGCGAGTTCCAGCTGGATGACTACCCCCAGGTGAGTCG TGAGATGTGGTTGCGGGTCCAAGCACTGTGAATCTTTTCTTGCCCTTGAG AAGCACCGGGGGGGGTTTTCGCCCTGGGGAATTGCCCTGGGGGCATTCAG TGCCGAGGTCAGCATGGGGGGTGGGGGGATTTGCTTGCGGCAACAAGGCT TGTCCTACTCTGAAGAGTTGCCTCTCCCTCCCCGCTGCTGCCTTGCCCGT CTGTCTCTCCCATTCCTTCCCCTTCCCGTGTGTCTGTTCACAGGGAACCA ATGCCGTTGTGGCTGTGATCTCCTACACTGGGTTTGACATGGAGGACGCG ATGATCCTGAACAAGGGGAGCTTTGAGAGGTGGGTGTGTTTGGGTGCGTA TGGGTGTTTGTGGGCGTGTGTGGGTAGGCGTAGTTGTCTGGGTGCCACCC CCCTGGGCACCTGCGGATTGTGGTGTACGCTGGTTGGGGGGGCTTGGCCG TGTTTGTTTGTTTGACCGCTTTTGGTGTGTGCTCCTACAGCTTTGGTGTG TGCTCTTACAGGCACACGAATTGTTGGGTAATGTAGCGCATTTTTTTGGG GGGTGGGTGGGCAATGGATTGGTTGGGAAGAAGGGAGGCAGGCAGGGGCC TGGGGTGGGAATGGTGTGGTGTGTGTCTGCGGTGAGAAGCTTGAAATGAC TGGAGGTCTTCACCGTCTTGACTGGCATTGTGTACCTTGGGGACAAACTG CGGTGGGGGTGCAGCCATCATGGAGCGACTTGCCAATCCTCCTACACTCT GGCAGCCAATCACGGCAGGAGTACACTGCTCCTCTTGCATGAGAAACAGC CCGTGTCACCACGTGTGTCAGGTTACCAGAGCATGTTGAAAATTCCAGTT GAACTGTCGGTGCTTCTACCCTCCCTTTCTCTGTGCAGTGTTGTATTTAA AGCTCGAAGAGGTGCTCTCTCTCTCTCTCTCTCTCTCCTCTATGCACTAA TGGCTTGATTGTGTGCTCTTTGGTTCAGGGGCTTTGGCCATGCCTCGGTG CTCAAGACCGTCACGGCTGACCTGAGGGAGATGGCGGGGGGGAGGAACAG GAGGGGGGGGGAGTCAAGGGTGCCTGCGCACCTCAAGTTCTCCAACCAGA AGCCCGGTGCGGCGAGGGGCATGAAGCTCTATGAGTCCCTGGACTTAGAT GGGCTTCTGCCTGTGGGGTCCTGGGTCAAGCCGGGGGATGCAATGTACTG TGTGATGGATGAGGTCACGGGGAAGACCCAGACGGGGAAGGTGTGTACTG CCCTGTGGCGCATATGTGTCCTGCCCTGTGGCGCAAGTGTGGAGTAGGTG CCTCGGTTTCGAGTAATGCGCGAGATTTGCATATGGAGCGCAGTAAATAT TTTTTTTTCCCTCCTTTTTCCAATTCTTTCTTTTGTTTGTCCTGTTTTAT CTTTATTTTTGTCCTGTTGTCTTCTTTTTTTTTCCCCTCTCTGTCGTTCT CTCATCTTCCTATCTTTTTTTTTTTTCCCTTCAGCGCCATGTGCGTGCGT GATGAAACACGGCAGACTCTGTCGAAGAGTGTGGCAGCAAGGATTTACTT TCTGTGCCTGCAGAGCACAGGGTGTGCTGGCCCTGCATGCGAATGTACTA ATATACCCTTAAGTGGCTCGACCTGCACCTGGGGGGGGTAAGAAAAGAAA ATGTGACAATGTCGCGGAGGTGAGGGAGATACTCCGCAGGGGACCAGTTC TTTGACAGCAGAGCAAAGCCGTTTTTGCTTTCGTGGAAACAGGTGGTTCC CCTGGGTGTAGGTAGGTGTTTGCCAATGAGGTGGGTCTCAGATGACTCCC GTGACCGCTGCTCTCGACTGTTGGGGCACCTAGCTGCAAATTATATGAAG GGTGTACCCACCGCTTCAACAACTAACCCCCCCCCGCCCCCCCCACTCCG CTCCCCCCGGAAAAAAGCAAAAACAATGAATCACCTCATGCATTTAGCCT TGTCTGCACTGCTGTTACCCTGTTCCTAACACTTTACCCTAAACCGGTGA AAATGTGGTGGCTTCATGGTGGTGATGCACTACAACAAACAGCACAAAGA GTCAGAGAAGGCCTGCGTGGAGACGGTGAGGGCGGTGGGTGTGGAGGGGG CGGGGAAGCATGGGCTCTCGCGGGTGTCGTACACCCTGCGCTTTCCAAGG AACCCTGTGATCGGGGACAAGTTCTCCTCTAGGCACGGGCAAAAGGGCGT CATGTCCATCCTGTGGCCTGCGGAGGACATGCCCTTCTCCGAGTCCGGAA TCTCCCCGGACGTGATCATCAACCCCCATGCTTTCCCTTCACGGATG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10054:909..4505+

>mRNA_D-mesarthrocarpus_Contig10054.1.1 ID=mRNA_D-mesarthrocarpus_Contig10054.1.1|Name=mRNA_D-mesarthrocarpus_Contig10054.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=966bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10054:909..4505+ (Discosporangium mesarthrocarpum MT17_79)
TGTGCACCGCTGCTCCTCTTGTTCCCTGGTGCCCTACGAACATGTTTTTT
GGGGACTTGTGTTCCCTGCGTGCACAAGATCGCATGCCTAAAGGATGATG
TGAAGAGGGGGCTGACCACACACAGAGAGCTGGACCCCACCAACATGCTG
TCGCTGGTGGCATCACTGACACCCTTCTCAGACTACAACCAGAGCCCGAG
AAACATGTACCAGTGCCAGATGGGAAAGCAGACGATGGGTACCCCTGCAC
ATTGCATGACCCCGCACAGGACGGACAACAAAATGTACAAGATCCTGTTT
CCTCAGGCAGCCATCGTCCAAACACGGCGTCACGGCGAGTTCCAGCTGGA
TGACTACCCCCAGGGAACCAATGCCGTTGTGGCTGTGATCTCCTACACTG
GGTTTGACATGGAGGACGCGATGATCCTGAACAAGGGGAGCTTTGAGAGG
GGCTTTGGCCATGCCTCGGTGCTCAAGACCGTCACGGCTGACCTGAGGGA
GATGGCGGGGGGGAGGAACAGGAGGGGGGGGGAGTCAAGGGTGCCTGCGC
ACCTCAAGTTCTCCAACCAGAAGCCCGGTGCGGCGAGGGGCATGAAGCTC
TATGAGTCCCTGGACTTAGATGGGCTTCTGCCTGTGGGGTCCTGGGTCAA
GCCGGGGGATGCAATGTACTGTGTGATGGATGAGGTCACGGGGAAGACCC
AGACGGGGAAGCACAAAGAGTCAGAGAAGGCCTGCGTGGAGACGGTGAGG
GCGGTGGGTGTGGAGGGGGCGGGGAAGCATGGGCTCTCGCGGGTGTCGTA
CACCCTGCGCTTTCCAAGGAACCCTGTGATCGGGGACAAGTTCTCCTCTA
GGCACGGGCAAAAGGGCGTCATGTCCATCCTGTGGCCTGCGGAGGACATG
CCCTTCTCCGAGTCCGGAATCTCCCCGGACGTGATCATCAACCCCCATGC
TTTCCCTTCACGGATG
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