Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10051.1.1 vs. uniprot
Match:
D7G2V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2V2_ECTSI)
HSP 1 Score: 61.6 bits (148), Expect = 1.620e-6
Identity = 29/37 (78.38%), Postives = 34/37 (91.89%), Query Frame = 2
Query: 92 LMDKKALQQTLLSLMEDDRFIDMLHARYIAQMRRRFS 202
L+DK+ALQ TL+SLMEDDRF+DMLHARY+A MRRR S
Sbjct: 510 LLDKRALQVTLMSLMEDDRFVDMLHARYLALMRRRAS 546
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10051.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 1
0 1 Expect = 1.62e-6 / Id = 78.38 Sequence D7G2V2_ECTSI
Match Name E-value Identity Description
D7G2V2_ECTSI 1.620e-6 78.38 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Seed ortholog 2880.D7G2V2 Preferred name DCP1A PFAMs DCP1,mRNA_decap_C Model size 1338 Max annot lvl 2759|Eukaryota KEGG ko ko:K12610,ko:K12611,ko:K12612,ko:K12655 KEGG Pathway ko03018,ko04622,map03018,map04622 KEGG Module M00395 Hectar predicted targeting category no signal peptide or anchor GOs GO:0000003,GO:0000184,GO:0000288,GO:0000290,GO:0000291,GO:0000578,GO:0000932,GO:0000956,GO:0002119,GO:0002164,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005667,GO:0005737,GO:0005829,GO:0005845,GO:0006139,GO:0006355,GO:0006401,GO:0006402,GO:0006403,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006979,GO:0007028,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007179,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007314,GO:0007315,GO:0007316,GO:0007350,GO:0007351,GO:0007389,GO:0007568,GO:0008047,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008298,GO:0008340,GO:0008358,GO:0008595,GO:0009056,GO:0009057,GO:0009266,GO:0009314,GO:0009408,GO:0009411,GO:0009416,GO:0009628,GO:0009719,GO:0009790,GO:0009791,GO:0009798,GO:0009880,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009948,GO:0009952,GO:0009987,GO:0009994,GO:0010033,GO:0010259,GO:0010468,GO:0010494,GO:0010556,GO:0010557,GO:0010603,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016441,GO:0016458,GO:0019094,GO:0019219,GO:0019222,GO:0019439,GO:0019894,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030234,GO:0031047,GO:0031086,GO:0031087,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034428,GO:0034518,GO:0034613,GO:0034641,GO:0034655,GO:0035194,GO:0035195,GO:0035282,GO:0035770,GO:0036464,GO:0040012,GO:0040029,GO:0042221,GO:0042802,GO:0043085,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043487,GO:0043488,GO:0043928,GO:0044085,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0044703,GO:0045451,GO:0045495,GO:0045893,GO:0045935,GO:0046483,GO:0046700,GO:0048468,GO:0048469,GO:0048477,GO:0048518,GO:0048519,GO:0048522,GO:0048599,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051173,GO:0051179,GO:0051252,GO:0051254,GO:0051641,GO:0051704,GO:0051716,GO:0060147,GO:0060148,GO:0060255,GO:0060293,GO:0060810,GO:0060811,GO:0060964,GO:0060966,GO:0060968,GO:0061013,GO:0065007,GO:0065008,GO:0065009,GO:0070727,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071559,GO:0071560,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0097159,GO:0098552,GO:0098562,GO:0098745,GO:0098772,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902115,GO:1902680,GO:1903311,GO:1903506,GO:1903508,GO:1903608,GO:1990521,GO:1990904,GO:2000112,GO:2000637,GO:2001141 Exons 1 Evalue 7.62e-10 EggNOG OGs KOG2868@1|root,KOG2868@2759|Eukaryota EC 3.4.19.12 Description mRNA-decapping enzyme Cds size 117 COG category J BRITE ko00000,ko00001,ko00002,ko01000,ko01002,ko03019,ko03036,ko04121
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789151.8425696-UTR-D-mesarthrocarpus_Contig10051:3215..4342 1680789151.8425696-UTR-D-mesarthrocarpus_Contig10051:3215..4342 Discosporangium mesarthrocarpum MT17_79 UTR D-mesarthrocarpus_Contig10051 3216..4342 - 1680789151.8662672-UTR-D-mesarthrocarpus_Contig10051:4459..4553 1680789151.8662672-UTR-D-mesarthrocarpus_Contig10051:4459..4553 Discosporangium mesarthrocarpum MT17_79 UTR D-mesarthrocarpus_Contig10051 4460..4553 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789151.8571453-CDS-D-mesarthrocarpus_Contig10051:4342..4459 1680789151.8571453-CDS-D-mesarthrocarpus_Contig10051:4342..4459 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig10051 4343..4459 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10051.1.1
>prot_D-mesarthrocarpus_Contig10051.1.1 ID=prot_D-mesarthrocarpus_Contig10051.1.1|Name=mRNA_D-mesarthrocarpus_Contig10051.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=39bp
MDKKALQQTLLSLMEDDRFIDMLHARYIAQMRRRFSTR* back to top mRNA from alignment at D-mesarthrocarpus_Contig10051:3216..4553-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10051.1.1 ID=mRNA_D-mesarthrocarpus_Contig10051.1.1|Name=mRNA_D-mesarthrocarpus_Contig10051.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1338bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10051:3216..4553- (Discosporangium mesarthrocarpum MT17_79)TGGTTGGGAGGGGGTAGGACGGCAGGGCAGGGAGGGGGACAGGAACAGGG
ACAAGGACAATAAGGACAGGGCAGGGGCAGGGGCAAGGAAGCTC ATGGAC
AAGAAAGCCCTTCAGCAGACGCTCCTGTCCCTAATGGAGGACGATCGGTT
CATCGACATGCTTCATGCCCGGTACATCGCACAGATGCGGAGGCGTTTCA
GCACCAGGTAG CAAGGGTGGCTGCCCCCCTGAGTGTACCGCCACAGCATC
GGTTCCTCTTGTTTTTTTCTCTGTTCGGCGTGTCGCGCATGTCCCACGCA
TCTGGCGCCTCCTCTACGAGCTCTCTTTCTCTCTCTCTGCAGCTGCTGTG
TGCAACCCTTTTGGAGGGTGTTGGAGTGTTTGGTTGATGCCAAGGAAGGT
GGGAGGTAGGGTTGCCAGCAGGGATTAGGGCTCTTCGGTTTTAGGGTTAG
GTCTGGGCTGGAGGAGGAGCAGGCGGTAGAGATTGTGTCTTGTGTTCCTC
CTCTCTGTGGGTTCATGCTCCAGTGTGCATCATGCCCGCCCTGCACTGAG
GAGCTGGAGCAAGGCACAGAAGCGGCTCAGTGGAAGAAGAGAGGAAAGAA
CTCAAGCGTTGTGTCTCCCCATCTGCAAGGGTCGCCGCAGCGGAAGACAT
TCATTACACATGCACGCCATTTGGCTCTGTTTCCTTTGCCCTTTTTCGTT
TATCTGCTGCCAAGGATGAAGAAATCATAGGCACCATTGCCAGCCGCTGC
AGGTGTTTGTGTGTGTGTGTGTTCTAAATGAAAGGATTAGTTCAAAGGCG
TACCTCTAAGCACCACTGTGTAGAGTTGTGTATACTCGCTCTACAGCGGG
TTGAAGGGTGTGTAGGCTGCTGTGTGGCTTGTCTATTGTCTTGGCGGCTT
GACCTCTTGCCTTTTCATGGGCTCTGGGGTACACTGAGATGTGCGGCACA
GGCATCTCGTCAAGATGTTCCAAGGTTCCACCCCAAGGCAACTTGCTTCC
ACTAGCAACCATTACTGTTAGAGATGTGTTGATTATTATGTATGTACTGT
ACAATTCCTTTGGTAAAAGAGAAGCAGGGGTTTCTATTTATCGCAGCAGG
CTGGTAGATTTGACTTTTCATCGGCAGAACTATCAATGTCCCAGCGGATG
TGATGCGGCTTGTGGCTCTCTCTGTGAAATAGAGCTCGAGGAAACATTCC
AGTGCGTTGCATGGATGGTAACATGTCATGCATGTCACTCACTCTTTCGC
CGTCGATGGGGTACATCATGAGTGAATAGTATGTACATTTCTACAATGCA
CTCTTCGTATTATAGCTCTAATAAATCTCAGTGCCGAC back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10051:3216..4553-
>mRNA_D-mesarthrocarpus_Contig10051.1.1 ID=mRNA_D-mesarthrocarpus_Contig10051.1.1|Name=mRNA_D-mesarthrocarpus_Contig10051.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=117bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10051:3216..4553- (Discosporangium mesarthrocarpum MT17_79) back to top