Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10046.3.1 vs. uniprot
Match:
A0A6H5KJV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJV9_9PHAE)
HSP 1 Score: 77.8 bits (190), Expect = 4.570e-15
Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 19 VSHVCDSLKRVFETHGACPIAPPALRPKPPXXXXXXXATATRPVSLLNSSGAVVTLPGDLTSSFAR 216
V+ VCD L+RVFETHGA P+APP +RPKPP + + V L++ GAVVTLPG+LTS FAR
Sbjct: 96 VALVCDGLRRVFETHGATPVAPPTIRPKPPPSLAPPVSASRGLVRLVDRKGAVVTLPGNLTSPFAR 161
BLAST of mRNA_D-mesarthrocarpus_Contig10046.3.1 vs. uniprot
Match:
D7G2X9_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X9_ECTSI)
HSP 1 Score: 74.7 bits (182), Expect = 5.650e-14
Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 19 VSHVCDSLKRVFETHGACPIAPPALRPKPPXXXXXXXATATRPVSLLNSSGAVVTLPGDLTSSFAR 216
V+ VCD L+RVFETHGA P+APP +RPKPP + V L++ GAVVTLPG+LT FAR
Sbjct: 946 VALVCDGLRRVFETHGATPVAPPTIRPKPPPSLAPPALASRGLVRLVDRKGAVVTLPGNLTVPFAR 1011
BLAST of mRNA_D-mesarthrocarpus_Contig10046.3.1 vs. uniprot
Match:
A0A835YR31_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR31_9STRA)
HSP 1 Score: 59.7 bits (143), Expect = 1.100e-8
Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 1
Query: 28 VCDSLKRVFETHGACPIAPPALRPKPPXXXXXXXATATRPVSLLNSSGAVVTLPGDLTSSFAR 216
VCD L+ FE HGA P+APP L P+PP + +P++LL+S G VV L DLT FAR
Sbjct: 1003 VCDVLRHAFEAHGAIPLAPPLLSPRPPRGEGGAYSVR-QPMTLLDSRGTVVVLARDLTVPFAR 1064
BLAST of mRNA_D-mesarthrocarpus_Contig10046.3.1 vs. uniprot
Match:
A0A1Z5KBK1_FISSO (Non-specific serine/threonine protein kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBK1_FISSO)
HSP 1 Score: 58.5 bits (140), Expect = 2.810e-8
Identity = 33/72 (45.83%), Postives = 41/72 (56.94%), Query Frame = 1
Query: 1 GMDPSMVSHVCDSLKRVFETHGACPIAPPALRPKPPXXXXXXXATATRPVSLLNSSGAVVTLPGDLTSSFAR 216
G DP +V VC+ LK VF HGA + P LRP+ + P +LNS GAV++LP DLT SFAR
Sbjct: 937 GSDPFVVETVCEKLKAVFHMHGASRLQNPLLRPR--ANHSSGINSTGGPAEVLNSRGAVLSLPEDLTVSFAR 1006
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10046.3.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 4
0 1 Expect = 4.57e-15 / Id = 57.58 Expect = 5.65e-14 / Id = 56.06 Expect = 1.10e-8 / Id = 49.21 Expect = 2.81e-8 / Id = 45.83 Sequence A0A6H5KJV9_9PHAE D7G2X9_ECTSI A0A835YR31_9STRA A0A1Z5KBK1_FISSO back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Seed ortholog 2880.D7G2X9 PFAMs HGTP_anticodon2,Pkinase,RWD,tRNA-synt_His Model size 219 Max annot lvl 2759|Eukaryota KEGG ko ko:K16196 KEGG Pathway ko04138,ko04140,ko04141,ko05160,ko05162,ko05164,ko05168,ko05169,map04138,map04140,map04141,map05160,map05162,map05164,map05168,map05169 Hectar predicted targeting category other localisation Exons 1 Evalue 8.89e-15 EggNOG OGs COG0124@1|root,KOG1035@2759|Eukaryota EC 2.7.11.1 Description eukaryotic translation initiation factor 2alpha kinase activity Cds size 216 COG category J BRITE ko00000,ko00001,ko01000,ko01001
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789150.9833968-UTR-D-mesarthrocarpus_Contig10046:3574..3577 1680789150.9833968-UTR-D-mesarthrocarpus_Contig10046:3574..3577 Discosporangium mesarthrocarpum MT17_79 UTR D-mesarthrocarpus_Contig10046 3575..3577 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789150.9963267-CDS-D-mesarthrocarpus_Contig10046:3577..3793 1680789150.9963267-CDS-D-mesarthrocarpus_Contig10046:3577..3793 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig10046 3578..3793 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10046.3.1
>prot_D-mesarthrocarpus_Contig10046.3.1 ID=prot_D-mesarthrocarpus_Contig10046.3.1|Name=mRNA_D-mesarthrocarpus_Contig10046.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=72bp
MDPSMVSHVCDSLKRVFETHGACPIAPPALRPKPPPSMAPAPATATRPVS back to top mRNA from alignment at D-mesarthrocarpus_Contig10046:3575..3793+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10046.3.1 ID=mRNA_D-mesarthrocarpus_Contig10046.3.1|Name=mRNA_D-mesarthrocarpus_Contig10046.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=219bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10046:3575..3793+ (Discosporangium mesarthrocarpum MT17_79)GGG ATGGACCCATCCATGGTGAGCCACGTGTGCGACAGCCTCAAGCGAGT
CTTCGAGACCCACGGGGCGTGCCCCATAGCCCCCCCAGCTCTCCGACCCA
AGCCCCCGCCCTCCATGGCCCCTGCACCCGCGACAGCCACGCGGCCAGTG
AGCCTCCTCAACAGCTCCGGTGCCGTTGTGACCCTGCCTGGGGATCTTAC
CTCCTCATTCGCCAGGTGA back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10046:3575..3793+
>mRNA_D-mesarthrocarpus_Contig10046.3.1 ID=mRNA_D-mesarthrocarpus_Contig10046.3.1|Name=mRNA_D-mesarthrocarpus_Contig10046.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=216bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10046:3575..3793+ (Discosporangium mesarthrocarpum MT17_79) back to top