mRNA_D-mesarthrocarpus_Contig10046.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10046.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10046.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10046.1.1 vs. uniprot
Match: D7G2X9_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X9_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 7.690e-23
Identity = 56/80 (70.00%), Postives = 62/80 (77.50%), Query Frame = 1
Query:   13 VSDPPMQVIRSLLSEQPTSRPSAAELLQSPLLPPKLEVEATFLREALHVIGNPESASFGEIVRALLAQETAEHVEHTYDH 252
            V D   QVIR LL     +RP+AAELL S LLPPKLEVEA+FLREAL V+GNPES +F  IV+ALL QETAEHVEH YDH
Sbjct:  850 VPDNAKQVIRWLLMTDADARPTAAELLSSALLPPKLEVEASFLREALRVMGNPESDTFQVIVKALLDQETAEHVEHWYDH 929          
BLAST of mRNA_D-mesarthrocarpus_Contig10046.1.1 vs. uniprot
Match: A0A6H5KJV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJV9_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 8.950e-22
Identity = 52/75 (69.33%), Postives = 60/75 (80.00%), Query Frame = 1
Query:   28 MQVIRSLLSEQPTSRPSAAELLQSPLLPPKLEVEATFLREALHVIGNPESASFGEIVRALLAQETAEHVEHTYDH 252
            +QVIR LL     +RP+AAELL S LLPPKLEVEA+FLREAL V+GNPES +F  +V+ALL QE AEHVEH YDH
Sbjct:    5 LQVIRWLLMADADARPTAAELLSSALLPPKLEVEASFLREALRVMGNPESDTFQVVVKALLDQEMAEHVEHWYDH 79          
BLAST of mRNA_D-mesarthrocarpus_Contig10046.1.1 vs. uniprot
Match: A0A421FU60_9STRA (Non-specific serine/threonine protein kinase (Fragment) n=6 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FU60_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.380e-16
Identity = 40/80 (50.00%), Postives = 55/80 (68.75%), Query Frame = 1
Query:   13 VSDPPMQVIRSLLSEQPTSRPSAAELLQSPLLPPKLEVEATFLREALHVIGNPESASFGEIVRALLAQETAEHVEHTYDH 252
            V D   ++I  L    P+ RP+A ELL SPLLP K+EVE ++LREAL  + NP+   FG+++ AL+AQE   HV++TYDH
Sbjct:  644 VPDDVKKIILWLCERDPSKRPNAKELLVSPLLPAKIEVEGSYLREALETLANPQGTFFGQLIDALVAQEPVNHVDYTYDH 723          
BLAST of mRNA_D-mesarthrocarpus_Contig10046.1.1 vs. uniprot
Match: K3W6N3_GLOUD (Non-specific serine/threonine protein kinase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6N3_GLOUD)

HSP 1 Score: 81.6 bits (200), Expect = 3.250e-16
Identity = 39/84 (46.43%), Postives = 57/84 (67.86%), Query Frame = 1
Query:    1 PDGCVSDPPMQVIRSLLSEQPTSRPSAAELLQSPLLPPKLEVEATFLREALHVIGNPESASFGEIVRALLAQETAEHVEHTYDH 252
            P+    D   +++  L +  P +RP+AAELL SPLLP K+EVE T+L+EAL ++ NPE   F +++ ALL QE   H+++TYDH
Sbjct:  745 PEFRAPDAVKEIVLWLCNPNPAARPNAAELLASPLLPAKMEVEGTYLKEALEILANPEGKFFCQLIDALLTQEPVNHIDYTYDH 828          
BLAST of mRNA_D-mesarthrocarpus_Contig10046.1.1 vs. uniprot
Match: A0A8K1FFG5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFG5_PYTOL)

HSP 1 Score: 81.3 bits (199), Expect = 4.440e-16
Identity = 40/74 (54.05%), Postives = 52/74 (70.27%), Query Frame = 1
Query:   31 QVIRSLLSEQPTSRPSAAELLQSPLLPPKLEVEATFLREALHVIGNPESASFGEIVRALLAQETAEHVEHTYDH 252
            Q+I  L +  P +RPSA ELL S LLP K+EVE T+LREAL  + NP+   FG++V ALL QE   H+++TYDH
Sbjct:  767 QIILWLCNRNPAARPSADELLASHLLPAKMEVEGTYLREALQTLANPQGKFFGQLVDALLTQEQVNHIDYTYDH 840          
BLAST of mRNA_D-mesarthrocarpus_Contig10046.1.1 vs. uniprot
Match: A0A5D6XRI4_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRI4_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 6.060e-16
Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 1
Query:   19 DPPMQVIRSLLSEQPTSRPSAAELLQSPLLPPKLEVEATFLREALHVIGNPESASFGEIVRALLAQETAEHVEHTYDH 252
            +P  ++I  L    P  RP+AAELL S LLP K+EVE T+L+EAL  + NPE   FG+++ ALL QE   HV++TYDH
Sbjct:  713 EPVREIILWLCQPSPALRPAAAELLASTLLPAKMEVEGTYLKEALETLSNPEGRFFGQLIDALLTQEPVPHVDYTYDH 790          
BLAST of mRNA_D-mesarthrocarpus_Contig10046.1.1 vs. uniprot
Match: G4YFW9_PHYSP (Non-specific serine/threonine protein kinase n=4 Tax=Phytophthora TaxID=4783 RepID=G4YFW9_PHYSP)

HSP 1 Score: 80.5 bits (197), Expect = 8.270e-16
Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = 1
Query:   16 SDPPMQVIRSLLSEQPTSRPSAAELLQSPLLPPKLEVEATFLREALHVIGNPESASFGEIVRALLAQETAEHVEHTYDH 252
            SD   ++I  L    P+ RP+A ELL SPLLP K+EVE ++LREAL  + NP+   FG+++ AL++QE   HV++TYDH
Sbjct:  721 SDDVKKIILWLCERDPSKRPNAKELLTSPLLPAKIEVEGSYLREALDTLANPQGKFFGQLIDALVSQEPLNHVDYTYDH 799          
BLAST of mRNA_D-mesarthrocarpus_Contig10046.1.1 vs. uniprot
Match: A0A484DTH9_BRELC (Non-specific serine/threonine protein kinase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTH9_BRELC)

HSP 1 Score: 79.3 bits (194), Expect = 2.110e-15
Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 1
Query:   16 SDPPMQVIRSLLSEQPTSRPSAAELLQSPLLPPKLEVEATFLREALHVIGNPESASFGEIVRALLAQETAEHVEHTYDH 252
            SD   ++I  L    P+ RP A ELL S LLPPK+EVE T+LREAL  + NP+   +G+++ AL+AQ    H+++TYDH
Sbjct:  705 SDDVKKIILWLCDRNPSKRPDAKELLMSTLLPPKMEVEGTYLREALETLANPQGKFYGQLIDALVAQAPLTHIDYTYDH 783          
BLAST of mRNA_D-mesarthrocarpus_Contig10046.1.1 vs. uniprot
Match: T0S0I9_SAPDV (Non-specific serine/threonine protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S0I9_SAPDV)

HSP 1 Score: 78.2 bits (191), Expect = 5.350e-15
Identity = 36/73 (49.32%), Postives = 52/73 (71.23%), Query Frame = 1
Query:   31 QVIRSLLSEQPTSRPSAAELLQSPLLPPKLEVEATFLREALHVIGNPESASFGEIVRALLAQETAEHVEHTYD 249
            Q+I  L    PT+RP+A ELL S LLPPK+EVE  +L+EAL  + NPE   FG++++AL  Q+  +HV++T+D
Sbjct:  667 QIIHWLCQSNPTARPTAGELLTSNLLPPKMEVEEKYLKEALQTLANPEGTFFGQLMQALFVQDPVDHVDYTFD 739          
BLAST of mRNA_D-mesarthrocarpus_Contig10046.1.1 vs. uniprot
Match: A0A835YR31_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR31_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 5.380e-15
Identity = 43/74 (58.11%), Postives = 50/74 (67.57%), Query Frame = 1
Query:   31 QVIRSLLSEQPTSRPSAAELLQSPLLPPKLEVEATFLREALHVIGNPESASFGEIVRALLAQETAEHVEHTYDH 252
            +VIR LL + P  RPSA            +EVE  FLREAL  I NP+S+SFG+IVRAL  Q+TAEHVEHTYDH
Sbjct:  907 EVIRWLLRKDPAQRPSATGEFDD------IEVEPAFLREALTCISNPQSSSFGQIVRALFEQDTAEHVEHTYDH 974          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10046.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2X9_ECTSI7.690e-2370.00Non-specific serine/threonine protein kinase n=1 T... [more]
A0A6H5KJV9_9PHAE8.950e-2269.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A421FU60_9STRA2.380e-1650.00Non-specific serine/threonine protein kinase (Frag... [more]
K3W6N3_GLOUD3.250e-1646.43Non-specific serine/threonine protein kinase n=1 T... [more]
A0A8K1FFG5_PYTOL4.440e-1654.05Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XRI4_9STRA6.060e-1651.28Non-specific serine/threonine protein kinase n=1 T... [more]
G4YFW9_PHYSP8.270e-1649.37Non-specific serine/threonine protein kinase n=4 T... [more]
A0A484DTH9_BRELC2.110e-1548.10Non-specific serine/threonine protein kinase n=1 T... [more]
T0S0I9_SAPDV5.350e-1549.32Non-specific serine/threonine protein kinase n=2 T... [more]
A0A835YR31_9STRA5.380e-1558.11Non-specific serine/threonine protein kinase n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10046contigD-mesarthrocarpus_Contig10046:895..2089 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G2X9
PFAMsHGTP_anticodon2,Pkinase,RWD,tRNA-synt_His
Model size252
Max annot lvl2759|Eukaryota
KEGG koko:K16196
KEGG Pathwayko04138,ko04140,ko04141,ko05160,ko05162,ko05164,ko05168,ko05169,map04138,map04140,map04141,map05160,map05162,map05164,map05168,map05169
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.2e-23
EggNOG OGsCOG0124@1|root,KOG1035@2759|Eukaryota
EC2.7.11.1
Descriptioneukaryotic translation initiation factor 2alpha kinase activity
Cds size225
COG categoryJ
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789150.92926-UTR-D-mesarthrocarpus_Contig10046:894..9211680789150.92926-UTR-D-mesarthrocarpus_Contig10046:894..921Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig10046 895..921 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789150.9404593-CDS-D-mesarthrocarpus_Contig10046:921..10371680789150.9404593-CDS-D-mesarthrocarpus_Contig10046:921..1037Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10046 922..1037 +
1680789150.9525735-CDS-D-mesarthrocarpus_Contig10046:1980..20891680789150.9525735-CDS-D-mesarthrocarpus_Contig10046:1980..2089Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10046 1981..2089 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10046.1.1prot_D-mesarthrocarpus_Contig10046.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10046 922..2089 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10046.1.1

>prot_D-mesarthrocarpus_Contig10046.1.1 ID=prot_D-mesarthrocarpus_Contig10046.1.1|Name=mRNA_D-mesarthrocarpus_Contig10046.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=75bp
MQVIRSLLSEQPTSRPSAAELLQSPLLPPKLEVEATFLREALHVIGNPES
ASFGEIVRALLAQETAEHVEHTYDH
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mRNA from alignment at D-mesarthrocarpus_Contig10046:895..2089+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10046.1.1 ID=mRNA_D-mesarthrocarpus_Contig10046.1.1|Name=mRNA_D-mesarthrocarpus_Contig10046.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1195bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10046:895..2089+ (Discosporangium mesarthrocarpum MT17_79)
CCAGATGGGTGTGTTTCTGACCCTCCAATGCAGGTGATTCGTTCCCTTCT GAGTGAACAGCCCACCTCAAGACCATCTGCAGCTGAGCTGCTCCAGAGCC CCCTCCTTCCGCCAAAGCTGGAGGTGGAGGCCACATTCCTCAGGTGCATG GAGGCCATGCACAATGGTTGGGGGGAGGGGAGGGCTTGGCTCTCTCTTGG CTTACCCACGTAGCTCTGCAGCTGTAGCCCTATCCGTAACCCTAGTGTAC CCTCGAAGAGTTACGTTATCACTCTCCCTCCTGCCATGGAATGAAACCAA AGAGCCCTTAGGTTTTGAAGGTGGAAGAAAATTGAGCTCTAGGGCTAGTA GTGGTACATGACAACAAGAAACTTATGGCAGCTGAGCACTTTGGGGGAAG CACACCGCCATGGCATTACCCTGACAAAGAGAAGAGGGGGGAAAGACTTT TTGCTGGAACCCCTCATAAGGACAAGATTAATAACGATCGATTCCATGGT AGGAAAAGGGTTAGGGATGATGGTGGGTTCAACTGGCCACTCCCCGCATG CCACAGGGAGAGATGTTTTTCCTACCGCAGGGTTAAATGAGGATCGTGGG TTGGATAACTGATTTTCTTGCCGCAAAGTGCTACAATAATGTGCTGCTCC TTAGAGCACAGTGGTCTACCTAGTAGCTCCAGAGCGCTTCAAAGAGGGTA GACGCCCATTCCCACGCCTGCTTCTTCTCTTGGCATTTCTGACGGCATTT CTGACACGGGTGCAGTGCCTGTCATCCTTTTTCATTGCGGATCTTCTAGT CCATCTGCTTGTGATTCTTAATTTGGTTTAGTTCTTCCCTGACTGACTTC TGCCGTGCCACCTTCACTTCGGCAGAATGTAACCCTAACCCTAACCCTAA CCCTAACCCTGACCCCTAACCCTGACCCCTAACCCTAACCCTAACCCTAA CCCTGACCCTGACCCTGACCCCTGACCCTGACCCCTGACCCTGACCCCTA ACCCTAACCCTTCCATGCCTCTCGCCACCTCACCCCCCCCTGCCATCACC GCTGCCGCCGCCACCGCGATCCCTTTCCCAATCCAGGGAGGCGTTGCATG TGATTGGGAATCCTGAGAGTGCCAGTTTTGGTGAGATTGTCAGGGCACTT CTGGCACAGGAGACGGCAGAGCACGTAGAGCACACATATGACCAC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10046:895..2089+

>mRNA_D-mesarthrocarpus_Contig10046.1.1 ID=mRNA_D-mesarthrocarpus_Contig10046.1.1|Name=mRNA_D-mesarthrocarpus_Contig10046.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=225bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10046:895..2089+ (Discosporangium mesarthrocarpum MT17_79)
ATGCAGGTGATTCGTTCCCTTCTGAGTGAACAGCCCACCTCAAGACCATC
TGCAGCTGAGCTGCTCCAGAGCCCCCTCCTTCCGCCAAAGCTGGAGGTGG
AGGCCACATTCCTCAGGGAGGCGTTGCATGTGATTGGGAATCCTGAGAGT
GCCAGTTTTGGTGAGATTGTCAGGGCACTTCTGGCACAGGAGACGGCAGA
GCACGTAGAGCACACATATGACCAC
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