mRNA_D-mesarthrocarpus_Contig10045.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig10045.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig10045.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig10045.1.1 vs. uniprot
Match: D5BZY6_NITHN (Beta-phosphoglucomutase family hydrolase n=1 Tax=Nitrosococcus halophilus (strain Nc4) TaxID=472759 RepID=D5BZY6_NITHN)

HSP 1 Score: 48.9 bits (115), Expect = 1.250e-5
Identity = 19/34 (55.88%), Postives = 26/34 (76.47%), Query Frame = 1 
Query:    1 HPAVPPLPCSQVYELQPDIKWDKGKAVMWLLDQL 102
            HP +      +VYELQPD+ WDKG+A++WLLD+L
Sbjct:  413 HPGLHKSHGKKVYELQPDVAWDKGRALLWLLDKL 446
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BLAST of mRNA_D-mesarthrocarpus_Contig10045.1.1 vs. uniprot
Match: D7G992_ECTSI (Trehalose-6-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G992_ECTSI)

HSP 1 Score: 48.5 bits (114), Expect = 1.730e-5
Identity = 19/25 (76.00%), Postives = 23/25 (92.00%), Query Frame = 1 
Query:   28 SQVYELQPDIKWDKGKAVMWLLDQL 102
             +V+ELQPDI WDKGKAV+WLLD+L
Sbjct:  222 KEVFELQPDIAWDKGKAVLWLLDKL 246
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BLAST of mRNA_D-mesarthrocarpus_Contig10045.1.1 vs. uniprot
Match: A0A2V5LEJ0_9BACT (Trehalose-phosphatase (Fragment) n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5LEJ0_9BACT)

HSP 1 Score: 45.4 bits (106), Expect = 4.430e-5
Identity = 18/25 (72.00%), Postives = 22/25 (88.00%), Query Frame = 1 
Query:   28 SQVYELQPDIKWDKGKAVMWLLDQL 102
             +VYEL PDI+WDKGKAV+WLL+ L
Sbjct:    4 KKVYELLPDIEWDKGKAVLWLLEAL 28
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BLAST of mRNA_D-mesarthrocarpus_Contig10045.1.1 vs. uniprot
Match: A0A2V5KVT7_9BACT (Trehalose 6-phosphate phosphatase n=3 Tax=unclassified Verrucomicrobia TaxID=417295 RepID=A0A2V5KVT7_9BACT)

HSP 1 Score: 47.0 bits (110), Expect = 5.750e-5
Identity = 19/34 (55.88%), Postives = 25/34 (73.53%), Query Frame = 1 
Query:    1 HPAVPPLPCSQVYELQPDIKWDKGKAVMWLLDQL 102
            HP +  +   +VYEL PDI WDKGKAV+WL++ L
Sbjct:  158 HPELRRIKGKKVYELLPDIDWDKGKAVVWLMESL 191
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BLAST of mRNA_D-mesarthrocarpus_Contig10045.1.1 vs. uniprot
Match: A0A2V5S642_9BACT (Trehalose 6-phosphate phosphatase n=2 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5S642_9BACT)

HSP 1 Score: 47.0 bits (110), Expect = 5.810e-5
Identity = 19/34 (55.88%), Postives = 26/34 (76.47%), Query Frame = 1 
Query:    1 HPAVPPLPCSQVYELQPDIKWDKGKAVMWLLDQL 102
            HP +  L   +VYELQPDI W+KGKA++WLL+ +
Sbjct:  163 HPQLRLLVGKKVYELQPDIDWNKGKALLWLLEMI 196
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BLAST of mRNA_D-mesarthrocarpus_Contig10045.1.1 vs. uniprot
Match: A0A651H8M9_9BACT (Trehalose-phosphatase n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A651H8M9_9BACT)

HSP 1 Score: 47.0 bits (110), Expect = 5.990e-5
Identity = 16/25 (64.00%), Postives = 24/25 (96.00%), Query Frame = 1 
Query:   28 SQVYELQPDIKWDKGKAVMWLLDQL 102
             +++ELQPD++WDKG+AV+WLL+QL
Sbjct:  432 KKIFELQPDVEWDKGRAVLWLLEQL 456
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BLAST of mRNA_D-mesarthrocarpus_Contig10045.1.1 vs. uniprot
Match: A0A7C7RFT3_9BACT (Trehalose-phosphatase (Fragment) n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A7C7RFT3_9BACT)

HSP 1 Score: 47.0 bits (110), Expect = 6.010e-5
Identity = 18/25 (72.00%), Postives = 22/25 (88.00%), Query Frame = 1 
Query:   28 SQVYELQPDIKWDKGKAVMWLLDQL 102
             +VYEL+PDIKWDKG+A+ WLLD L
Sbjct:  424 KKVYELRPDIKWDKGEAIFWLLDTL 448
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BLAST of mRNA_D-mesarthrocarpus_Contig10045.1.1 vs. uniprot
Match: A1WTX7_HALHL (Trehalose 6-phosphate phosphatase n=1 Tax=Halorhodospira halophila (strain DSM 244 / SL1) TaxID=349124 RepID=A1WTX7_HALHL)

HSP 1 Score: 46.6 bits (109), Expect = 7.980e-5
Identity = 19/34 (55.88%), Postives = 25/34 (73.53%), Query Frame = 1 
Query:    1 HPAVPPLPCSQVYELQPDIKWDKGKAVMWLLDQL 102
            HP +   P   V+ELQPD+ WDKG+AV+WLL+ L
Sbjct:  166 HPGLRCGPGKCVFELQPDVAWDKGRAVLWLLEAL 199
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BLAST of mRNA_D-mesarthrocarpus_Contig10045.1.1 vs. uniprot
Match: A0A2V6D1R2_9BACT (Trehalose 6-phosphate phosphatase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6D1R2_9BACT)

HSP 1 Score: 46.6 bits (109), Expect = 8.200e-5
Identity = 18/34 (52.94%), Postives = 27/34 (79.41%), Query Frame = 1 
Query:    1 HPAVPPLPCSQVYELQPDIKWDKGKAVMWLLDQL 102
            +P +  +   +VYELQPD+ W+KGKAV+WLL++L
Sbjct:  180 YPKLRKIDNKKVYELQPDVDWNKGKAVIWLLERL 213
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BLAST of mRNA_D-mesarthrocarpus_Contig10045.1.1 vs. uniprot
Match: UPI0003015B7F (trehalose-phosphatase n=1 Tax=Nitrosococcus watsonii TaxID=473531 RepID=UPI0003015B7F)

HSP 1 Score: 46.6 bits (109), Expect = 8.260e-5
Identity = 17/25 (68.00%), Postives = 23/25 (92.00%), Query Frame = 1 
Query:   28 SQVYELQPDIKWDKGKAVMWLLDQL 102
             +VYELQPD+ WDKG+A++WLLD+L
Sbjct:  226 KKVYELQPDVAWDKGQALLWLLDKL 250
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10045.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D5BZY6_NITHN1.250e-555.88Beta-phosphoglucomutase family hydrolase n=1 Tax=N... [more]
D7G992_ECTSI1.730e-576.00Trehalose-6-phosphate phosphatase n=1 Tax=Ectocarp... [more]
A0A2V5LEJ0_9BACT4.430e-572.00Trehalose-phosphatase (Fragment) n=1 Tax=Verrucomi... [more]
A0A2V5KVT7_9BACT5.750e-555.88Trehalose 6-phosphate phosphatase n=3 Tax=unclassi... [more]
A0A2V5S642_9BACT5.810e-555.88Trehalose 6-phosphate phosphatase n=2 Tax=Verrucom... [more]
A0A651H8M9_9BACT5.990e-564.00Trehalose-phosphatase n=1 Tax=Gemmatimonadales bac... [more]
A0A7C7RFT3_9BACT6.010e-572.00Trehalose-phosphatase (Fragment) n=1 Tax=Candidatu... [more]
A1WTX7_HALHL7.980e-555.88Trehalose 6-phosphate phosphatase n=1 Tax=Halorhod... [more]
A0A2V6D1R2_9BACT8.200e-552.94Trehalose 6-phosphate phosphatase n=1 Tax=Verrucom... [more]
UPI0003015B7F8.260e-568.00trehalose-phosphatase n=1 Tax=Nitrosococcus watson... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10045contigD-mesarthrocarpus_Contig10045:591..692 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog472759.Nhal_3182
PFAMsGlyco_hydro_65C,Glyco_hydro_65N,Glyco_hydro_65m,HAD_2,Trehalose_PPase
Model size102
Max annot lvl135613|Chromatiales
KEGG rclassRC00049
KEGG koko:K01194
KEGG ReactionR00010
KEGG Pathwayko00500,ko01100,map00500,map01100
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue2.05e-06
EggNOG OGsCOG0637@1|root,COG1554@1|root,COG1877@1|root,COG0637@2|Bacteria,COG1554@2|Bacteria,COG1877@2|Bacteria,1MWJE@1224|Proteobacteria,1RPN6@1236|Gammaproteobacteria,1X03I@135613|Chromatiales
EC3.2.1.28
DescriptionGlycosyl hydrolase family 65 central catalytic domain
Cds size102
COG categoryG
CAZyGH37
BRITEko00000,ko00001,ko00537,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789150.889261-CDS-D-mesarthrocarpus_Contig10045:590..6921680789150.889261-CDS-D-mesarthrocarpus_Contig10045:590..692Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig10045 591..692 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10045.1.1prot_D-mesarthrocarpus_Contig10045.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig10045 591..692 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig10045.1.1

>prot_D-mesarthrocarpus_Contig10045.1.1 ID=prot_D-mesarthrocarpus_Contig10045.1.1|Name=mRNA_D-mesarthrocarpus_Contig10045.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=34bp
HPAVPPLPCSQVYELQPDIKWDKGKAVMWLLDQL
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mRNA from alignment at D-mesarthrocarpus_Contig10045:591..692+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10045.1.1 ID=mRNA_D-mesarthrocarpus_Contig10045.1.1|Name=mRNA_D-mesarthrocarpus_Contig10045.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=102bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10045:591..692+ (Discosporangium mesarthrocarpum MT17_79)
CACCCCGCCGTGCCTCCTCTCCCGTGTTCCCAGGTCTACGAGCTTCAGCC
GGATATCAAGTGGGACAAGGGCAAGGCTGTCATGTGGCTACTGGACCAGC
TG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10045:591..692+

>mRNA_D-mesarthrocarpus_Contig10045.1.1 ID=mRNA_D-mesarthrocarpus_Contig10045.1.1|Name=mRNA_D-mesarthrocarpus_Contig10045.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=102bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10045:591..692+ (Discosporangium mesarthrocarpum MT17_79)
CACCCCGCCGTGCCTCCTCTCCCGTGTTCCCAGGTCTACGAGCTTCAGCC
GGATATCAAGTGGGACAAGGGCAAGGCTGTCATGTGGCTACTGGACCAGC
TG
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