mRNA_D-mesarthrocarpus_Contig1004.6.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1004.6.1
Unique NamemRNA_D-mesarthrocarpus_Contig1004.6.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: A0A485KCR1_9STRA (Aste57867_2222 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KCR1_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.880e-22
Identity = 74/218 (33.94%), Postives = 108/218 (49.54%), Query Frame = 1
Query:  478 DGFITKSMFLAAVAWPWKICNGAWFDGKIGIWPVADFVLVARVTPITGRREHR------S*PATVNGERHKELMIEEVIPVLKASIPGHR------------PHDLRAARWCKATHVEGDHGDNPGCCGRHITLETQPINSPDPNANGLGFFHPIQQLK--------EDVGVTTGEELEEITMGETLE*AWQRLFAVYGADMGCKGDNSYRLPHLGKE 1053
            + FITK MFLAAVA P+      +FDGK+G+WP   FV   +V P    R++R      + P  V GE ++E+++ +VIP +KA++PG R            PH     ++ K+  V G            + +  QP NSPD N   LGFFH IQ L+        E++    GE L E  + ETL   +  L  V    +  +G N ++LPH+ K+
Sbjct:   83 NSFITKVMFLAAVARPYDYRTRKFFDGKLGVWP---FV---KVEPAEQSRKNRPRGTLITSPQNVTGEVYREMILRKVIPSIKANLPGARSREIVLQQDNAGPHSQMTTQFLKSQGVRG------------VVVAPQPPNSPDFNVLDLGFFHSIQSLQHHKRTRNIEELVGAVGEALFEFPV-ETLSKTFITLQKVMETSISIRGGNEFKLPHMKKD 281          
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: W4FWJ6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWJ6_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 9.290e-19
Identity = 79/236 (33.47%), Postives = 105/236 (44.49%), Query Frame = 1
Query:  406 HAGQDWRLPTPRR--------EIPNPRGRRTKDGFITKSMFLAAVAWP-WKICNGAWFDGKIGIWPVADFVLVARVTPI--TGRREHRS*PATVNGERHKELMIEEVIPVLKASIPGHRPHDLRAARWCKATHVEGDHGDNPGCC---GRHITLETQPINSPDPNANGLGFFHPIQQLKEDVGVTTGEELEEITMGE-------TLE*AWQRLFAVYGADMGCKGDNSYRLPHLGK 1050
            H  + W   TP R        E P  R  ++K  FITK MFL+AVA P W      WFDGKIG W     V  AR +     G  E R  P  V    +K+++I+ VIP +KA  P      +   +     HV     D    C   G  + L+ QP NSPD N   LGFF  IQ L++     T E++   T          +LE  +  L +     +GC G NSY++ H+ K
Sbjct:    6 HVDEKWFHATPIRSRFYLLPGEEPPHRSTQSKR-FITKVMFLSAVARPLWDNAKSEWFDGKIGTWHFTQHVRAARSSRNRPAGTMELR--PVNVTRPVYKKMLIDNVIPAIKALWPADCSKTVFIQQDNARLHVPPSDADIIKACTSDGWAMKLKYQPPNSPDMNVLDLGFFRAIQALQQTHHSNTYEDIVNATNNAWKDVDPWSLERNFLTLQSCLREVIGCAGGNSYKISHMKK 238          
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: A0A485KGK4_9STRA (Aste57867_5319 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGK4_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 2.690e-18
Identity = 68/206 (33.01%), Postives = 105/206 (50.97%), Query Frame = 1
Query:  484 FITKSMFLAAVAWPWKICN-GAWFDGKIGIWPVADFVLVARVTPITGRREHRS*PATVNGERHKELMIEEVIPVLKASIP-GHRPH------DLRAARWCKATHVEGDHGDNPGCCGRHITLETQPINSPDPNANGLGFFHPIQQLKEDVGVTTGEEL-EEITMG------ETLE*AWQRLFAVYGADMGCKGDNSYRLPHLGKEK 1056
            FITK MFLAAVA P    +    FDGKIG+WP  +  +  R +    +    + P +V+G  +K ++I +V+P ++A  P G++P+      D      C  T     HG +       I++  QP NSPD N   LGFF+ IQ L++     + ++L + +T+       E+L   +  L +V    M   G N+Y+LPHL K+K
Sbjct:   86 FITKVMFLAAVARPRHDTHRNCAFDGKIGMWPFVEQSIAKRTSKNRPKGSIETKPLSVDGVVYKSMIINKVVPAIQAKFPVGNQPNGVFIQQDNAGPHTCVTTKFLRAHGVSG------ISMTCQPANSPDFNVLDLGFFNAIQNLQQKKPSRSIDQLIDAVTLAFDEMPIESLAKTFITLQSVMEKAMEVNGGNNYKLPHLHKDK 285          
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: W4FGU6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FGU6_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 4.930e-18
Identity = 72/202 (35.64%), Postives = 93/202 (46.04%), Query Frame = 1
Query:  484 FITKSMFLAAVAWP-WKICNGAWFDGKIGIWPVADFVLVARVTPI--TGRREHRS*PATVNGERHKELMIEEVIPVLKASIPGHRPHDLRAARWCKATHVEGDHGDNPGCC---GRHITLETQPINSPDPNANGLGFFHPIQQLKEDVGVTTGEELEEITMGE-------TLE*AWQRLFAVYGADMGCKGDNSYRLPHLGK 1050
            FITK MFL+AVA P W      WFDGKIG W     V  AR +     G  E R  P  V    HK+++I+ VIP +KA  P      +   +     HV     D    C   G  + L+ QP NSPD N   LGFF  IQ L++     T E +   T          +LE  +  L +     +GC G NSY++PH+ K
Sbjct:  144 FITKVMFLSAVARPRWDNAKSEWFDGKIGTWHFTQHVRAARSSRNRPAGTMELR--PVNVTRPVHKKMLIDNVIPAIKALWPADCSKTVFIQQDNARPHVPPSDADIVKACTSDGWAMKLKYQPPNSPDMNILDLGFFRAIQALQQTHHSNTYEGIVNATNNAWKDVDPWSLERNFLTLQSCLREVIGCAGGNSYKIPHMKK 343          
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: A0A6A4Z6G2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z6G2_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 8.250e-18
Identity = 67/205 (32.68%), Postives = 96/205 (46.83%), Query Frame = 1
Query:  484 FITKSMFLAAVAWP-WKICNGAWFDGKIGIWPVADFVLVARVTPITGRREHRS*PATVNGERHKELMIEEVIPVLKASIPG----HRPHDLRAARWCKATHVEGDHGDNPGCCGRHITLETQPINSPDPNANGLGFFHPIQQLKED-VGVTTGE----------ELEEITMGETLE*AWQRLFAVYGADMGCKGDNSYRLPHLGK 1050
            FITK MFLAAVA P +       FDGKIGIWP  + V   R +    +        +VN + ++++++ EV+P ++  +P         D  +   C  T +   HG +       I +  QP NSPD N   LGFF+ IQ L++  V  + GE          EL    +G+T       L  V    MGC G N+Y +PH+ K
Sbjct:   11 FITKVMFLAAVARPRYDAHKKQMFDGKIGIWPFVEEVAAVRSSKNRPKGTLELTTQSVNADVYQDMVMNEVVPAIQVKMPRGVVVKLQQDNASPHRCVTTELIARHGVDS------IEVANQPPNSPDFNVLDLGFFNSIQSLQQQKVARSIGELIAAVEEAFYELPVTILGKTFI----TLQKVMELSMGCSGGNTYTMPHMSK 205          
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: A0A485KCF4_9STRA (Aste57867_2720 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KCF4_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.310e-17
Identity = 68/206 (33.01%), Postives = 105/206 (50.97%), Query Frame = 1
Query:  484 FITKSMFLAAVAWPWKICN-GAWFDGKIGIWPVADFVLVARVTPITGRREHRS*PATVNGERHKELMIEEVIPVLKASIP-GHRPH------DLRAARWCKATHVEGDHGDNPGCCGRHITLETQPINSPDPNANGLGFFHPIQQLKEDVGVTTGEEL-EEITMG------ETLE*AWQRLFAVYGADMGCKGDNSYRLPHLGKEK 1056
            FITK MFLAAVA P    +    FDGKIG+WP  +  +  R +    +    + P +V+G  +K ++I +V+P ++A  P G++P+      D      C  T     HG +       I++  QP NSPD N   LGFF+ IQ L++     + ++L + +T+       E+L   +  L +V    M   G N+Y+LPHL K+K
Sbjct:  242 FITKVMFLAAVARPRHDTHRNCAFDGKIGMWPFVEQSIAKRTSKNRPKGSIETKPLSVDGVVYKSMIINKVVPAIQAKFPVGNQPNGVFIQQDNAGPHTCVTTKFLRAHGVSG------ISMTCQPANSPDFNVLDLGFFNAIQNLQQKKPSRSIDQLIDAVTLAFDEMPIESLAKTFITLQSVMERAMEVNGGNNYKLPHLHKDK 441          
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: W4GP40_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GP40_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 9.490e-17
Identity = 71/223 (31.84%), Postives = 102/223 (45.74%), Query Frame = 1
Query:  445 EIPNPRGRRTKDGFITKSMFLAAVAWP-WKICNGAWFDGKIGIWPVADFVLVARVTPITGRREHRS*PATVNGERHKELMIEEVIPVLKASIPGHRPHDLRAARWCKATHVE-GDHGDNPGCC--GRHITLETQPINSPDPNANGLGFFHPIQQLKEDVGVTTGEELEEITMGE-------TLE*AWQRLFAVYGADMGCKGDNSYRLPHLGKEKPAWARNLS 1080
            E P  R  ++K  FITK MFL+AVA P W      WFDG+IG W     V   R +         + P TV  + +++++I+ VIP +KA  P  +   +   +     HV   D      C   G  I +  QP NSPD N   LGFF  IQ L+E     T +EL + T+         TL   +  L       +   G N+Y++P  G+E+   AR ++
Sbjct:  111 EEPPHRSTKSKR-FITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQTVPAQRSSRNRPSGTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWPNDKAARILLQQDNARPHVPLSDERVAAACASDGWAIEVVCQPPNSPDMNVLDLGFFRAIQTLQERTRCKTIDELIDATLSAWTTVDAMTLNSNFLTLQTCLIEVVRAGGGNNYKIPPHGQEEVGQARAVT 332          
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: A0A6A4Z8M2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z8M2_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.190e-16
Identity = 66/206 (32.04%), Postives = 90/206 (43.69%), Query Frame = 1
Query:  484 FITKSMFLAAVAWP-WKICNGAWFDGKIGIWPVADFVLVARVTPITGRREHRS*PATVNGERHKELMIEEVIPVLKASIPGHRP--------HDLRAARWCKATHVEGDHGDNPGCCGRHITLETQPINSPDPNANGLGFFHPIQQLKEDVGVTTGEELEEITMGE-------TLE*AWQRLFAVYGADMGCKGDNSYRLPHLGKE 1053
            FITK MFLAAVA P +       FDGKIG+WP  D V   R +    +    + P +VN E + + ++ +VIP +K+  P             D  +   C  T    D G +       I +  QP NSPD N   LGFF+ IQ L+      + EEL +            TL      L  V    +   G N Y+LPH+ K+
Sbjct:   53 FITKVMFLAAVARPRFDPHTRRVFDGKIGVWPFVDVVAAKRKSVNRDKGTLVTVPLSVNAEVYYDTVVTKVIPAIKSKFPSSTTSSGKVIIQQDNASPHKCVTTRKLDDRGISG------IEIANQPSNSPDFNVLDLGFFNSIQSLQHQKSTRSIEELVDAVQAAFYEMPVATLSKTLITLQKVMEMSIAIHGSNDYKLPHMNKD 252          
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1)

HSP 1 Score: 90.1 bits (222), Expect = 4.750e-16
Identity = 75/223 (33.63%), Postives = 100/223 (44.84%), Query Frame = 1
Query:  451 PNPRGRRTKDGFITKSMFLAAVAWPWKICNGAWFDGKIGIWPVADFVLVARVTP--ITGRREHRS*PATVNGERHKELMIEEVIPVLKASIP-----------GHRPH-DLRAARWCKATHVEGDHGDNPGCCGRHITLETQPINSPDPNANGLGFFHPIQQLKEDVGVTTGEELEEITMGETLE*AWQRLFAVYGADMGC-------KGDNSYRLPHLGKEK 1056
            P P  R     FITK+MFLAAVA P    NG  F GKIGI+P        R +   + G    +    ++  E+ K  +IE+VIP + A  P             +PH D   A + +A   +G            I L  QP NSPD N   LGFF  IQ L+ +   TT EEL         E   ++L  V+     C       KGDN Y++PH+GK++
Sbjct:  126 PEPTRRVKSKRFITKAMFLAAVARP---RNG--FSGKIGIFPFTFIEPAKRNSKNRVAGTMVTKV-DESITKEKVKSCLIEKVIPAIHAKWPQGMRTIIIQQDNAKPHIDCNNAEFMQAASKDGF----------DIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDR 332          
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Match: A0A6A4ZBD2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZBD2_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.770e-15
Identity = 70/209 (33.49%), Postives = 98/209 (46.89%), Query Frame = 1
Query:  484 FITKSMFLAAVAWP-WKICNGAWFDGKIGIWPVADFVLVARVTPITGRREHRS*---PATVNGERHKELMIEEVIPVLKASIPGHR-------PHDLRAARWCKATHVEGDHGDNPGCCGRHITLETQPINSPDPNANGLGFFHPIQQLKEDVGVTTGEEL--------EEITMGETLE*AWQRLFAVYGADMGCKGDNSYRLPHLGKE 1053
            FITK MFLAAVA P +     A+FDGK+G+WP   FV+V      +  R   +    P  V+G+ +K+ +I++VIP +    P            D  +   C  T V    G         I +E QP NSPD N   LGFF+ IQ L+      + EEL         E+ M +TL   +  L  V    +   G N+Y+LPH+ K+
Sbjct:  208 FITKVMFLAAVARPQYDHTRNAYFDGKVGVWP---FVVVEPAKRNSKNRAKGAPVVVPQVVDGKVYKKAIIDKVIPAILERFPPRTLARGVVIQQDNASPHRCVTTEVLAQRGLEK------IRVENQPPNSPDFNVLDLGFFNSIQSLQHQKSTRSIEELIGAVEAAFYELPM-DTLSKTFITLQKVMQTSIEMLGSNNYKLPHMRKD 406          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1004.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A485KCR1_9STRA1.880e-2233.94Aste57867_2222 protein n=1 Tax=Aphanomyces stellat... [more]
W4FWJ6_9STRA9.290e-1933.47Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A485KGK4_9STRA2.690e-1833.01Aste57867_5319 protein n=2 Tax=Aphanomyces stellat... [more]
W4FGU6_9STRA4.930e-1835.64Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A6A4Z6G2_9STRA8.250e-1832.68Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A485KCF4_9STRA1.310e-1733.01Aste57867_2720 protein n=2 Tax=Aphanomyces stellat... [more]
W4GP40_9STRA9.490e-1731.84Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A4Z8M2_9STRA1.190e-1632.04Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
UPI0007F012D14.750e-1633.63uncharacterized protein LOC108203813 n=1 Tax=Daucu... [more]
A0A6A4ZBD2_9STRA1.770e-1533.49Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1004contigD-mesarthrocarpus_Contig1004:9599..11018 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1420
Hectar predicted targeting categoryother localisation
Exons1
Cds size288
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789150.2977884-UTR-D-mesarthrocarpus_Contig1004:9598..102761680789150.2977884-UTR-D-mesarthrocarpus_Contig1004:9598..10276Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1004 9599..10276 +
1680789150.3198438-UTR-D-mesarthrocarpus_Contig1004:10564..110181680789150.3198438-UTR-D-mesarthrocarpus_Contig1004:10564..11018Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1004 10565..11018 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789150.3074548-CDS-D-mesarthrocarpus_Contig1004:10276..105641680789150.3074548-CDS-D-mesarthrocarpus_Contig1004:10276..10564Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1004 10277..10564 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1004.6.1prot_D-mesarthrocarpus_Contig1004.6.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1004 10277..10564 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1004.6.1

>prot_D-mesarthrocarpus_Contig1004.6.1 ID=prot_D-mesarthrocarpus_Contig1004.6.1|Name=mRNA_D-mesarthrocarpus_Contig1004.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=96bp
MIEEVIPVLKASIPGHRPHDLRAARWCKATHVEGDHGDNPGCCGRHITLE
TQPINSPDPNANGLGFFHPIQQLKEDVGVTTGEELEEITMGETLE*
back to top

mRNA from alignment at D-mesarthrocarpus_Contig1004:9599..11018+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1004.6.1 ID=mRNA_D-mesarthrocarpus_Contig1004.6.1|Name=mRNA_D-mesarthrocarpus_Contig1004.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1420bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1004:9599..11018+ (Discosporangium mesarthrocarpum MT17_79)
GGGGGGTGGATATTGCAGAGAAGTTTGGAGTTTCCTGAAGGACGGTATTC AGTCATCTCAAAGCATATGACCTCCAGAAGCCAAACGGACAATCTATGGG CATGTCCTGAGGGCGCAAGGGGCGTTGTGGTTGCCCCATGGCTGTAACCA ATCCGTGTGACATGCCGTGAATAAGCCCCACATCTTGCCGAAAATGGGTG GTCAAATCGGGGGTCCCTATCTCCGCATTGTTGTGACACATGTGTCAGCG CCAGGGGGTGAGGAAGCACAAACGATGGATCAAGCCGCTGCTCTTGCATA AGCAGCAGGTCAATCAGGTGGCTTTTGTCCGGAGTGAGGATGATGTGGGG TGTTGGTGAACAAGATGCTCGACTCGGTCCACGTTGGTGAGAAGTGGTTT CACGTCACGCAGGACAGGACTGGAGACTACCTACACCACGCAGAGAAATC CCCAACCCCCGAGGGCGCAGAACAAAGGATGGATTCATCACCAAGTCCAT GTTCCTTGCTGCTGTTGCATGGCCTTGGAAGATCTGCAATGGGGCGTGGT TTGATGGTAAGATCGGTATCTGGCCTGTCGCAGATTTTGTGCTGGTGGCA AGAGTGACACCAATAACCGGAAGAAGGGAACACCGATCATGACCAGCCAC GGTCAACGGGGAGAGGCACAAGGAACTCATGATTGAGGAGGTCATCCCTG TACTCAAGGCGAGCATACCTGGACACAGGCCACACGATCTTCGTGCAGCA CGATGGTGCAAAGCAACACACGTGGAAGGGGATCATGGAGACAATCCAGG GTGCTGTGGGAGACACATCACACTGGAAACCCAGCCTATAAACTCACCTG ACCCCAACGCCAATGGTCTTGGCTTCTTCCACCCCATCCAGCAGCTTAAG GAGGATGTGGGAGTGACCACTGGCGAGGAGCTGGAGGAGATCACCATGGG GGAGACACTAGAATGAGCCTGGCAGAGGCTTTTTGCAGTGTATGGAGCAG ACATGGGGTGCAAGGGTGACAACAGCTACAGGCTGCCTCACTTGGGCAAG GAAAAGCCTGCTTGGGCACGCAATCTTTCCAAGGATGCAAGGAGGACGAC AGGATATATGGAGGACTTCGGAGGGGGGTACTAGCTCAATGTAGGCGGCA TCGTTTTCTGTGATATTTCGAGAGATGGTTACACTGAGTCTTTCAAAGTT TCCTACGAATTAGAAGATACTAGCATGAAAACAAATGTTTCCTGCATATT GGGCTGCGCTACAAATCTATACCCTTACTATGAAACAGAGAATGCATAAT ACAGCACTTTATACTACATACATTACATACACCAGAACAAACAACAATAA TTTCATTTGTACGTGGAAACTTGGTACTATGGGGTACTAGTGTGTTTATT CCAGCATGGTGGATGATAGC
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1004:9599..11018+

>mRNA_D-mesarthrocarpus_Contig1004.6.1 ID=mRNA_D-mesarthrocarpus_Contig1004.6.1|Name=mRNA_D-mesarthrocarpus_Contig1004.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=288bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1004:9599..11018+ (Discosporangium mesarthrocarpum MT17_79)
ATGATTGAGGAGGTCATCCCTGTACTCAAGGCGAGCATACCTGGACACAG
GCCACACGATCTTCGTGCAGCACGATGGTGCAAAGCAACACACGTGGAAG
GGGATCATGGAGACAATCCAGGGTGCTGTGGGAGACACATCACACTGGAA
ACCCAGCCTATAAACTCACCTGACCCCAACGCCAATGGTCTTGGCTTCTT
CCACCCCATCCAGCAGCTTAAGGAGGATGTGGGAGTGACCACTGGCGAGG
AGCTGGAGGAGATCACCATGGGGGAGACACTAGAATGA
back to top